Xiphophorus hellerii (green swordtail): 116730901
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Entry
116730901 CDS
T07363
Name
(RefSeq) sorting and assembly machinery component 50 homolog A
KO
K07277
outer membrane protein insertion porin family
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116730901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116730901
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116730901
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
116730901
Transporters [BR:
xhe02000
]
Other transporters
Pores ion channels [TC:
1
]
116730901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
116730901
NCBI-ProteinID:
XP_032436352
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Position
13:complement(7865109..7871764)
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AA seq
469 aa
AA seq
DB search
MGTVHARSLDPLPMQGPELGVQADDVEAPEIEQEPKQEVLENKNVVVQRVHIDGLGRTKD
DFLSYEIAEVFRAKNLIDVMRRSHDARQKLLRLGIFRKVEVVIDTSRGEGALPNGLDVTF
EVTELRRLTGSYNTMVGNNEGSMVLGVKLPNVLGRAEKLTFQFSYGTKETSYGLSFFKPQ
PGQFERNISVNAYKVTGQFPWSSLRETDRGISTEVSFPLWKTSQTLKWEAVWRELGSLGQ
TASFAIREESGHSLKSSLSHAMAIDTRNSSILPRKGGLLKIHQELAGYTGGDARFLKEDF
EIQLNRALVLDSVISASLWGGLLLPIGDKSTCIADRFYLGGPTSIRGFSMYSMGPQSDGD
FLGGEAYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPQAHLKKLAE
CIRWSYGLGIVLRLGNIARVELNYCIPMGVQSGDRICDGFQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtccatgccaggagcctcgaccctctgcccatgcaggggccagagttaggc
gtccaagcggacgacgtcgaagctccggagattgaacaggagccaaagcaagaagttctt
gaaaacaaaaatgttgttgtccagcgagtccacattgatggacttggaagaacaaaggat
gactttttgagttatgaaatcgccgaagtgttcagggcaaaaaacctgattgacgtgatg
cggaggtctcacgacgcgcgacagaagctgctgcgtctcggtatcttcaggaaggtggag
gttgtcatcgacacttcgcgaggtgaaggcgcccttcctaatggtcttgacgtgaccttt
gaggtcactgagctcaggcgtttgacaggcagctataacactatggtcggaaacaatgaa
gggagcatggtactcggagtaaaattaccaaatgtgttaggtagggcagaaaagctgaca
ttccagttctcctacggcaccaaagagacatcgtacggactctccttcttcaaaccccaa
ccaggacagtttgagcgcaacatctcggtcaacgcgtacaaagttacaggtcagtttccg
tggagctcactaagagagacggatcgaggcatctccacagaagttagctttcctttgtgg
aagaccagccaaaccctaaagtgggaagcggtgtggagagagctgggctctctgggtcag
acggcctctttcgccatccgagaggagagtggccattcgctcaagtcttccctttcgcac
gctatggccatcgacaccaggaactcctccatccttccgaggaaaggcggattactgaag
attcatcaggagctggctggttacaccggaggcgacgccaggttcctgaaggaggacttt
gagattcaactcaacagagctctcgttttggattcggttatttctgcctcattgtgggga
ggccttcttctacccattggtgataagtcaacatgcattgcagacaggttctacctcggt
ggcccgaccagcatcaggggatttagtatgtacagcatgggcccacaaagtgacggtgat
ttcctgggaggtgaagcctactgggcgggaggcctccacctctacacgcctctgcccttc
agaccgggccgaggcggtttcggcgatctcttcagaacccatttcttccttaacgccgga
aacctttgtaacctcaactacggcgaggggcctcaggcacatttgaagaaactggcagaa
tgcatccgctggtcctatgggctgggcatcgtgctgcgtttggggaacattgccagggtg
gaactgaattactgcattcccatgggagtccaaagtggagacaggatatgcgacgggttc
cagttcggagcaggaattaggttcttgtga
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