Xiphophorus hellerii (green swordtail): 116731210
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Entry
116731210 CDS
T07363
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U-like isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116731210
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116731210
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116731210
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116731210
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
Type II RPTP family
116731210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
PTPlike_phytase
Y_phosphatase3
PTP_tm
Motif
Other DBs
NCBI-GeneID:
116731210
NCBI-ProteinID:
XP_032436728
LinkDB
All DBs
Position
13:27780726..27978053
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AA seq
1454 aa
AA seq
DB search
MYSAALLLMLAVRICADNLERPTAGCTFDEDSDSGLCEYRQGQEDDFDWQLIKTFNWPNP
TADLLPGSFMMVNSSQHLGGQRAQLYLLPLSENDTHCIQFSYFLYSRDGHSPGALQVYIR
VNGGPKGSAVWNISGSQGRQWHQVELAVSTFWPSDYQVIFEATVSEERQGYIALDDTVLL
NYPCYKVPHFSRLGDVEVNAGQNASFQCVATGKVSETEPFVLERRNSAVLDTSWLSRLSH
KRLMATFQVEAQRGEQDLYRCITLSPRGAAVSNFGELIVRVPPTPIAPPQLLRAGPTYLI
IQLNTNSIVGDGPVIRREIQYRASQSTWKETHVVGSLTYKVWHLEPDTEYYISVLLTRPG
EGGTGAPGPPLVSRTKCAEPMRALRGLTATEIQPRLLALQWEPLGYNLTRCHTYTLYLCY
RYSMPTGSSGGNNATVRECLSVDRNTSHFTLRDLPPFRAVHVRLALANPEGKKESREVTF
QTEEDIPGGIAPESLTFTPLDDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPGP
RRTVSKLRNETYHMFSGLHPGTTYLVSVRARTAKGFGQTALTEITTNISAPVFDYEDIPS
PLSESESTITVLLRPALGRGAPVSAYQVVVVEEDGSRRVRRRELGTVDCFPMANSHSEAQ
AKGAPHYYTAELAPSSLPEATPFTVGDNHTYNGYWNSPLDPTKNYLIYFQATSNFKGETR
INCIRIARKAACKDSKRALEVSQHAEDMGLILGACAGGLAVLVLLLGAIVIIVKKGRDFY
SYPYYPRKKVAINKAAMSYRQEKSRKLSPLDCSLTEQSTLQQDERMAHSFMDAHGGNARN
EQRSSVNESSSLLGGSPQRHCRRKSSPYHTGQLHPAVRVADLLQHINQMKTSEGYGFKQE
YESFFDGWDATKKKDKTKGRHDSLLSPDRHRVKLHSLLADPSSDYVNANYIDIRINREGY
QRSNHFIATQGPKQEMIYDFWRMVWQENCFSIVMLTKLVEVGRMKCFKYWPEDTELYGDI
KITLLKTETLAEYTVRTFAMERRGYPSKHEVCQFHLTSWPEHGVPYHATGLLAFLRRVKA
STPPDAGPVVVHCSMGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEE
QYVFIHDAILEACLCGETGIPVSEFAPAYKEMLKVDSQSNTSQLREEFQTLNSVTPHLDV
EECSVSLMPRNREKNRSMDVLPPDRSLAFLVTTEGESSNYINAALADSFLRPAAFVVTPH
PLPGTTTDFWRLIYDYSCTSVVMLNQLNQSNSAWPCLQYWPEPGIQQFGPMTVELLSRTA
DDDVIIRLFRIQNITRLQEGQLVVRHFQFLRWSPYRDVPDSKKAFLSLLAQVHNWQRECG
EGRTIVHCLNGGGRSGTFCACTMILEMIQHHSMVDVFFAAKTLRNSKPNMVETMEQYRFC
YELVQEYLDCLEVR
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagcggcgctgctactgatgctggccgtccggatctgcgcagacaacctggag
cgaccaacagctggctgcaccttcgacgaggactcggactctgggttatgtgaataccgc
cagggtcaagaggacgacttcgactggcagttgatcaagaccttcaactggccaaacccg
acagcagacctcctgccagggtccttcatgatggtcaattcctctcagcatttggggggc
cagcgagcgcagctgtacctgctccccctgagtgagaacgacacccactgcatacagttc
agctacttcctgtacagccgtgacggccacagcccgggggccctgcaggtctacatccgg
gtcaacggcggccccaagggcagcgccgtgtggaatatctctggctcccaggggcgacag
tggcaccaggtggagctggccgtcagcaccttctggcccagcgattaccaggtcatcttt
gaagcgactgtttccgaagagcggcagggttacatcgccttggatgacaccgtgctgctc
aactatccctgttacaaggtgcctcatttctctcggctgggagacgtggaggtgaacgcc
gggcagaacgcctcgtttcagtgtgtcgccacgggcaaagtctctgagacggagccattc
gtgctcgagcggagaaacagcgccgtgctcgacacttcctggctgtcgcggctgagccac
aagaggctgatggcgacgtttcaggtggaggcgcagcgcggcgagcaggacctctaccgc
tgcatcaccctgtcccccaggggggccgccgtctccaactttggagagctcatcgtcaga
gtcccgcccacgcccatcgccccgccccagctcctgcgagctggtcccacctacctgatc
atccagctcaacaccaactccattgttggagacggacctgtcatccggcgggagatccag
taccgggccagccagtccacctggaaggagacccatgtggtgggctcgctcacctacaag
gtctggcacctggagccagacaccgagtactacatcagcgttctgctgacacgacccggg
gaaggaggcaccggagcgccgggaccaccgctggtcagccggaccaagtgtgcagagccc
atgcgtgccttgcggggcctcacagccacagagatccagccgcgtcttttggcccttcag
tgggagccgctgggctacaacctgacacgctgccacacgtacacgctgtacctctgctat
cgctactccatgccgacagggagcagcgggggcaacaacgccactgtaagggagtgcctg
tcggtggaccgcaacacctcccacttcaccctcagggacctgccacccttccgggcggtc
catgtgaggctggcactggccaacccagagggcaagaaggagagccgggaggtcacattt
cagacggaggaggacattcctgggggaatcgctccagagtctttaaccttcactccactc
gacgacatgatcttcctcaagtgggaggagcctgtagagcccaacggtctcatcacacag
tatgagatcagctaccagagcattgaatcctctgacccgggcatcaacgttcccggtcct
cgccgcaccgtctccaagctgaggaatgaaacctaccacatgttctcgggcctgcacccc
ggaaccacctacctggtctctgttcgggctcgcacggccaaaggcttcggccagaccgct
ctcacagagatcactaccaacatatctgcccctgtgttcgactatgaagacatcccgtct
ccgctgagcgagtcagagagcaccatcaccgtgctgctgcgccctgccctggggaggggg
gcgcctgtcagtgcctaccaggtggtggtggtggaggaggacggctcccgccgggtgaga
aggagagagctgggcaccgtcgactgcttccctatggccaactctcacagcgaggctcag
gccaaaggggccccgcattactacacagctgagctggcccccagcagtctgcctgaggcc
acacctttcactgtgggggacaaccacacctacaatggctactggaacagtcctttagac
cccaccaagaactacctcatctacttccaggctaccagcaacttcaaaggggagaccagg
ataaactgtattcgaattgctcgcaaagctgcctgtaaagactccaagcgggctttggag
gtatcccagcacgccgaggacatgggtctgatcctgggcgcctgcgccggcggtctggcg
gttctggttctcctcctgggggccatcgtcatcatcgtgaagaagggaagggacttctat
tcttacccttactaccctaggaagaaggtggccataaacaaggcagccatgtcctacagg
caggagaagagccggaagctgagcccgctggactgcagcctgacggagcagagcaccctc
cagcaggacgagaggatggctcactccttcatggacgcccacggcggcaacgctcgaaat
gagcagcgtagctcggtcaacgagtccagcagcttgctgggaggctcgccgcagcgccac
tgtcggaggaagagttcgccgtaccacacgggtcagctccacccggcggtgagggtcgcc
gacctgcttcagcacatcaaccagatgaagacgtccgagggatacggcttcaagcaggag
tacgagagtttcttcgatggctgggatgccaccaagaagaaagacaagaccaaaggacga
cacgacagcctgcttagccctgatcggcatcgagtcaagctccactctctgctggcagac
cccagctcagattatgtcaatgccaactacatagacattcggataaacagggaaggttac
cagcgatccaaccacttcattgccactcaaggccccaagcaggagatgatctatgatttc
tggcggatggtttggcaggagaattgcttcagtattgtcatgctcaccaagctggtggaa
gtgggccggatgaaatgtttcaagtactggcctgaagacactgagctgtacggcgacatt
aagataacgctactgaagacggaaaccctggcagagtacacagtccgcaccttcgccatg
gagcggagaggctacccttctaagcatgaggtgtgccagttccacttgacctcctggcct
gagcatggcgtgccgtaccacgccacgggcctgctggccttcctgcgccgggtcaaggcc
tccacaccccccgacgctggacctgtggtcgtccactgcagcatgggcgccggccggact
ggctgctacatcgtgctggacgtcatgctggatatggccgaatgtgaaggagtggtggac
atctacaactgcgtgaagacgctgtgctcccgtcggatcaacatgatccagactgaagag
cagtacgtcttcatccacgatgccatcctggaggcctgcctgtgtggagaaaccggcatc
cccgtgtctgagtttgctcctgcctacaaggaaatgctgaaagtggattctcagagcaac
acctcacagctcagagaggagtttcagaccctgaactcggtgactcctcacctggacgtg
gaggagtgcagcgtctccctgatgcccaggaaccgggagaagaaccggagtatggacgtt
ctgccgccggaccgctccctggccttcctcgtcaccaccgagggcgagagcagcaactac
atcaacgcagcgctggccgacagcttcctccgacccgctgccttcgtggtgacgccgcac
ccgctgcccggcaccaccaccgacttctggaggctcatatacgactacagctgcacctcg
gtggtgatgctgaaccagctcaaccagtccaactctgcctggccctgcctgcagtactgg
ccggagcctgggatccagcagttcggccccatgactgtggagctcctgtccaggactgca
gatgatgacgtcatcatccgactcttccggattcagaatatcacacggcttcaggagggt
cagctggtggtgcgccacttccagttcctgcgctggtccccgtaccgagacgttcccgac
tccaagaaagcgttcctcagccttctggctcaggtccacaactggcagcgggaatgtggc
gagggacgcaccatcgtccactgcctgaacggcggcggtcgcagtggcactttctgcgca
tgcaccatgatcctggagatgatacaacatcacagcatggtggacgtgttcttcgctgcc
aagacgctgcgcaactccaagccaaacatggtggagaccatggagcagtaccgtttctgc
tacgagctggtccaggagtacctggactgtctggaggtcagatag
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