Xiphophorus hellerii (green swordtail): 116731212
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Entry
116731212 CDS
T07363
Symbol
jarid2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116731212 (jarid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116731212 (jarid2)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
116731212 (jarid2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
116731212 (jarid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
116731212
NCBI-ProteinID:
XP_032436732
LinkDB
All DBs
Position
13:15224268..15340397
Genome browser
AA seq
1448 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVMRKVLYLSLKEFRTAQKRQLDGDGTTNLNGSL
ANGQLNGSVSKGCHKEDGSLRSQGLHGSNKYGEDSPAKKRPRLQAQRKFAQSQPNSPSTT
PVKVADTGNMNGNLSTAPSTSLSSLSSSSLSSSIQDLSRRKPKTEDFLTFLCLRGSSALP
SNMAYFGSSQEEEDLEEEEDEEEEEVRNSAGVHTQGAGGSSQASASSSCNSTPRKGKLPA
RQPLNGHVFNNHSKAGTRESPRPKAGTHSRDSPAPPLPPPPPPPPPLLRERSERAEAREH
ARELQALASSRGTANGLPSRRAAEELRKQVSKVNGMTRAGSAQAVGGAKKSHDLRLPSKT
VKKYTATVSKGHVTYTKAKQKELGKKTKLSSSNKHNSAASASSSANNHNQHSQPAASNRL
ANSGKAAAPAHHSNAKTRKQVLLSNGLHKAAVNMRPNGRLNGQWHNASAKEDGQKQCQQG
HGECPGREGLRNSKRRLEVVLNSVSTGVVVQKAKTSGSEAKKAKLQPAPLETRSSSKKVA
NDEKAAKQNSTPTTPISNGHDAEKPTPPKQTQPATPLSPSSPPPQQTPPPSTPAANVEPV
NQRPKRASAGKLMLIRQAQQQQSRLHGRSSSSSPSVGYNNTPNPSRASTTSDPQQISASS
PSSCNNSSTLPSTNGPGQIKPAALRLADRDKEWEHEKELTRQKEREQEKERERQRSKPEG
WAALGEVPVFRPSQREFQDPLVYLDAVREQAEVAGMCRVVPPQDWRPECKLNEEMRFVTQ
VQRVHMLGRRWGPNVQRLACIRKHLKSQGITMDEPPVIGGCEVDLSRFFQLINDMGGMQQ
VMDLKKWTKLADLLRIPKSAQDRLAKLQEAYLQYILSYDSFSAEERLRLLGDVLQEKKNL
ESRQGPLEGLSDSASHALPRYEPKNGLVGGIVGGTTGNHRTNGVYHRLKCLKELEAQVKA
GRRRLFAQEKQGKEDRHNGEQRMEEDRGILSDQYKCIYKGKSVSLTNFFRIARNTMTMCF
NKEPGAAEVEQEYWRIVEQRDTHVAVHCGKVDTSTHGSGFPTGKSEPFSKHGWNLTVLPN
NSGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEK
AKLDKVVHTLLQANGTPGLEMLEKNIMISPEVLCREGIKVYRTVQRSGQFVVCFPGAFVS
KVCCGYSVSETVHFATPHWMNLGYQAAKDLKFRCIAKPFSMEKLLYQIATAESKRDNGLL
LTTISTLLKDLRNIELHQRQELYNAGLLSSARYGTHEGNLCPTDGRKKPRGKWLALESLE
RRCQICQHLCYLSMVVQETDNVVFCLECALRYVEKHKSCRGLKMMYRYDEEQINSLVNQV
CGRAMLKNGGVGIGGGAVIVSGGGGDSCHTLSPAKASPAKRGPRKRATVEVSLARLSSIH
MPKAAAVS
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagaggaatatcatccagaagaaatacgatgacagtgatggg
atcccgtggtcagaagaacgggtgatgcgaaaggtgctttacctctccctgaaggaattt
aggactgcacagaaacggcagctggatggcgatggaaccacaaaccttaatggttctctt
gccaatgggcagctgaatggctcggtgtcgaagggctgccacaaagaagatgggtccttg
cgctctcagggcctccatgggagcaacaaatatggcgaggacagtcctgcaaaaaagagg
cctcgactccaggctcagcggaagttcgcccagtcgcagcccaactcgcccagcactacg
ccggtcaaagtggccgacacaggcaacatgaacggcaacctgtccaccgctccgtcaacg
tccctctcgtcgctctcctcctcctccctgtcctcctctatccaggacctctcccggcgc
aagcccaagacggaggacttcctcacgttcctctgcctccgaggttcctctgccttgccc
agtaatatggcctattttggaagctcccaggaggaggaggacctggaggaggaagaagat
gaggaggaagaggaggtgcggaacagcgcaggagtccacacacaaggtgcaggaggcagc
agccaagcctcggcctcctcctcttgcaactctacacctcgcaagggcaaactccccgcc
aggcagccgctcaatgggcacgtttttaacaaccacagcaaagcagggaccagggagagt
ccgaggccgaaggcgggcacacacagcagggactcacccgctcctccactgccgcctcct
ccgccacctcctccacctctactgagggagcgcagcgagcgggcggaggctcgagagcac
gccagggagctccaggccttggccagcagtcggggcaccgccaacgggttgccatcgagg
agagcggctgaggagctacggaagcaggtctcaaaagtgaatgggatgacgcgggctggc
tcggcacaagctgtcggtggtgccaagaagagccacgacttacgactgccgtccaaaact
gtgaagaagtacacagctaccgtgtccaagggccacgtcacctacaccaaagccaaacag
aaagaactgggcaagaaaaccaaactcagcagcagtaacaaacacaacagcgccgcctcg
gcatcatcgtcagcgaacaatcacaatcagcacagccagccagcagccagcaataggctg
gccaactcaggaaaagcagcggcaccagcccaccacagcaatgcaaaaacccgcaaacag
gtgctattatcaaacgggctgcacaaagcggcggtcaacatgcgacccaacggcaggcta
aatgggcaatggcacaatgcctcagccaaggaggacgggcagaaacagtgccagcaaggc
cacggggagtgcccgggtcgagagggactgcgaaactccaagcggcgtctggaggtggtg
cttaactctgtgagtacaggggttgttgtgcagaaagccaaaacgagtggctccgaggcc
aaaaaggccaagcttcagcccgcaccactggagacgcgcagcagcagcaaaaaggtggcc
aatgacgagaaagctgccaagcagaacagcacccctaccactccaatttctaatggacat
gatgcagagaagcccaccccgcctaaacagactcaacctgctactccactttcaccttct
agtccaccgcctcaacaaacgccacctccttctacaccagcagccaacgtggagccagtg
aaccagcgacccaagcgtgcatcggccggcaagctgatgttgatacgacaagcacagcaa
cagcaaagcaggttgcatggtcgcagctcctcctcatccccctcagtaggctacaataac
acaccaaaccccagtcgagccagcactacctcagaccctcaacaaatctctgcctcctct
ccctcgtcctgcaacaactcatctactcttccttccaccaacggcccaggccagatcaaa
ccagcagcgttgcggctcgcagaccgcgacaaggaatgggagcacgagaaagagctgacg
cggcaaaaggaacgtgagcaggagaaggagcgggagcgccagcggagcaagccagagggc
tgggcggcgctgggcgaagtgcctgtcttccggccctctcagagggagttccaggaccct
ctggtgtacttggacgcagtgagggaacaggccgaggtggctggcatgtgccgtgtggtg
ccaccgcaagactggcggccggagtgcaagctgaatgaggagatgcgctttgttacacag
gtgcagagggtccacatgctgggccgacgctggggcccaaatgtgcagcggctggcttgc
atccgcaagcaccttaaatctcagggcattaccatggatgagccaccagtcattggtggc
tgtgaagtggacctgtcacgtttttttcagctcatcaatgacatgggcggcatgcagcag
gtcatggacctgaagaagtggaccaagcttgccgacctcctccgaatccccaagtcagca
caggaccggctggccaagctacaggaggcgtatctccagtacatcctctcctatgactct
tttagcgccgaggagcgcctccggcttctgggcgatgtgctgcaagagaaaaagaacctg
gagtcgcgccagggcccccttgagggcctctcggattctgcttcgcacgccttgccacgc
tacgagcccaaaaatgggttagtgggcggaatagttggagggacgaccgggaaccatcgc
accaacggagtgtaccaccgtctgaaatgtctgaaggagctggaggctcaggtcaaagcg
ggccgacgccggctcttcgctcaggaaaaacaaggcaaagaggacaggcataacggagag
cagcgaatggaggaggaccggggcattctcagtgatcagtacaagtgtatttacaagggg
aaatcggtttccttgaccaacttcttcaggatagcccggaacaccatgaccatgtgcttt
aataaggaacctggagctgctgaggttgagcaagaatactggaggatagtggagcagaga
gacacccacgtggcagtccactgtggaaaggtggacaccagtacacacggcagtggtttc
ccaacaggaaaatcagagccattttcaaaacatggatggaacctcactgtcctcccaaat
aattctggatccatactgaggcatctgggtgctgtgcctggggtgaccattccctggcta
aatattggcatggtcttttctacctcatgctggtctcgagaccaaaatcgccttccatat
attgattacttacacactggtgctgactgcatttggtattctgtccctgctgaggagaag
gccaagctggacaaggtggtccatacactgcttcaagccaatggcaccccaggactagaa
atgctggagaagaatataatgatctctccagaggtgctgtgccgtgaaggcatcaaggtt
taccgtacggtccagcggagtggccagtttgtggtctgcttccccggtgcctttgtctct
aaagtgtgctgtggctacagcgtgtcagaaacggtgcactttgccacgccacactggatg
aacctgggttaccaggctgcaaaggacctgaaatttcgttgcatagccaagcctttctcc
atggagaagctactgtatcagatcgccaccgctgagtccaagagggacaacggccttctc
ctcaccaccatctccaccctactcaaagacctcaggaacatagagttgcaccaacgtcag
gaactttataacgcaggtttgctgtcctctgcccggtatggcacgcatgagggcaacctc
tgccccactgacgggcgcaagaagccccgcgggaaatggctggcactggagtccttggag
agacgctgccaaatctgtcaacacctctgctacctgtccatggtggttcaggagacggac
aacgtggttttctgtctggagtgtgcactacgctacgtggagaagcacaagtcctgcagg
gggcttaagatgatgtatcgatatgatgaggagcaaatcaacagtttggtgaaccaggtg
tgcggtagggccatgttaaagaacggaggagtcggcatcggaggaggagccgtcattgtt
agcggaggagggggagactcttgccacactctaagccccgccaaagcatcgccagccaag
cggggcccccggaagcgcgccactgtggaggtgtccctggcccgcctgtcgtccatccac
atgccgaaggcggcggccgtgtcctga
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