Xiphophorus hellerii (green swordtail): 116731223 Help Entry 116731223         CDS       T07363                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe03040   Spliceosome Brite KEGG Orthology (KO) [BR:xhe00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116731223 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:xhe03021]     116731223 (sf3b3)    03041 Spliceosome [BR:xhe03041]     116731223 (sf3b3)    03036 Chromosome and associated proteins [BR:xhe03036]     116731223 (sf3b3) Transcription machinery [BR:xhe03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      116731223 (sf3b3) Spliceosome [BR:xhe03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     116731223 (sf3b3)  Complex B     116731223 (sf3b3)  Complex C    U2 SnRNP specific factors     116731223 (sf3b3) Chromosome and associated proteins [BR:xhe03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      116731223 (sf3b3)     TFTC complex      116731223 (sf3b3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Nucleoporin_N Motif Other DBs NCBI-GeneID:  116731223 NCBI-ProteinID:  XP_032436763 LinkDB All DBs Position 2:4339254..4366057 Genome browser AA seq 1217 aa AA seqDB search MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNQFEKVHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVSCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDEIGDKGTI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRRFVIHPETNNLILIETDHNAYTETTKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG DDWYVLVGVARDMILNPRSVGGGFIYTYRLTAGGEKLEFVHKTPVEDVPLAIAPFQGRIL VGVGKLLRIYDMGKKKLLRKCENKHVPNLVTGIYTIGQRVIVSDVQESLFWVRYRRNENQ LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVVVNYNIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctctacaacatcaccctgcagcgggccaccggcatcactcatgccattcatgga aacttctcaggaaccaagatgcaggagattgttgtttccaggggaaagatcctggaatta ttgcgtccggatgcgaacacgggaaaggtgcataccctcctcacaatggaagtgttcggc atcatcaggtccctgatggccttcaggctcacaggaggaactaaagattacatcgtcgtg ggaagcgacagcggccgcatcgtcatcctggagtaccatccgtccaaaaatcagtttgag aaagttcaccaggaaacatttgggaagagcggctgccggcgcatcgttcccggacagttc ctggccgtcgacccaaaaggaagagctgtgatgatcggagcgatagagaagcagaagctg gtctacatcctgaacagagacgccgctgccaggctcaccatctcgtctcctctggaagct cacaaagcaaacacgcttgtttatcacgtggtcggagtcgacgttggctttgagaatccc atgtttgcctgcttagaaatggactacgaggaagccgacaacgacccgacaggagaagct gctgcaaacacacagcagactctgaccttttatgagctggatttgggtctgaaccacgtg gtccggaagtacagcgaggctttggaggagcatgggaacttcctcatcaccgttcctggc ggttcagacggacccagcggcgttctgatctgctctgaaaactacatcacctacaagaac tttggggatcagcccgacatccgctgtcccatcccccgccgcaggaacgacctggacgac cctgagcgcggcatgatctttgtctgctcagccacccacaaaaccaagtccatgttcttc ttcctggctcagactgagcagggagacatcttcaaggtcacgctggagaccgatgaagaa atggtcactgaaatccggcttaaatacttcgacacgatccccgtggcaacagccatgtgc gtcctgaagaccggcttcctgtttgtggcctcagagtttggaaaccattatctctaccaa atcgctcacttgggcgacgacgacgaggagccggagttctcctcggcgatgccgctggag gagggagacactttcttctttcaacctcggccgctcaaaaacttggtgctggtggacgaa caggagaacctttcccccatcatgtcctgtcagattgctgatttggccaatgaagacacg cctcagctctacgtgtcctgtggacggggcccaaggtccacactgagggttcttcgccac ggactggaggtttcagagatggctgtgtctgagctgcctggtaaccccaacgccgtgtgg accgtacgccggcacgtggaagatgagttcgacgcttacatcatcgtgtctttcgtcaac gccacgctggttctgtccatcggagaaaccgtggaggaagtgacagactccgggtttctg ggaacaacgcccactctgtcctgctccctgctgggcgaagacgccctcgtgcaggtttac ccagacggcattcgtcatattcgagcggacaagcgtgtgaacgagtggaaaactcctggg aaaaaaactattgtccgctgcgccgtgaatcagcggcaggtcgtcatcgctttgaccgga ggagaactcgtctacttcgagatggacccgtctggccagctgaacgaatacacggagcgg aaggagatgtctgcagatgtggtctgcatgagcctggccaacgtcccgcctggcgagcag cgctcccgcttcctggctgtgggcctggtggacaacacggtccggatcatctccctggac ccgtcggactgtctgcagccgctgagcatgcaggcgcttcctgctcagccggaaagcctg tgtatcgtcgagatgggaggcgttgagaaacaggatgaaatcggagataaaggaaccatc ggcttcctctacctgaacatcggcctgcagaacggtgttctgctgaggacagtattggac ccggtaactggtgacctgtcggataccagaacccgatacttggggtcccgtccagtcaag ctgttcagagtccggatgcagggacaggaggccgttctggccatgtccagccgctcgtgg ctcagctactcctatcagtcccgcttccatctgacgccgctctcttatgaaacgctggag tacgcgtccggctttgcctcagagcaatgccctgaaggcatcgtggccatctccaccaac actctgaggattttggctctggagaaactgggggccgtgttcaaccaggtggcgtttcct ctgcagtatacgccccggaggtttgtaattcacccggaaaccaacaacctcatcctgata gagaccgaccacaacgcctacaccgagacgaccaaagctcagaggaagcagcagatggct gaggagatggtggaggcggctggtgaggatgagcgagagctggctgctgagatggcggcg gcgttcctgaacgagaacctcccagaagctattttcggcgcgcctaaagccggagcgggt cagtgggcttcactggtgcgactggttaaccccatccagggctccactctggatcaggtg cagctggagcagaacgaagctgcctttagtgtggccgtgtgccgcttccctaacaccggc gatgattggtacgtcctggtgggagtcgccagagacatgatcctcaaccccagatctgtc ggtggtggcttcatctacacgtatcgcctcaccgccggaggggagaagctggagtttgtg cacaagactccagtggaggacgtgcctctggccattgcaccgttccagggacgcatcctg gtcggagtcggaaaactgctgagaatctacgacatgggcaagaagaagctgctgcgcaag tgtgagaacaagcacgttcccaacctggtgacgggcatctacaccattggccagcgtgtc attgtgtccgacgttcaggaaagcctgttctgggtccgttaccggcgcaacgagaaccaa ctaatcatctttgccgacgatacgtacccccgctgggtgacgacggcctgtctgctcgac tacgacaccatggcttctgccgacaagtttggcaacatcagcatcgtgcgtcttcctccc aacaccagtgatgatgtggatgaagaccccacaggaaacaaggccctgtgggatcgaggt ctcctgaacggagcatcacagaaagcggaggttgtggtgaactacaacatcggagagacg gtgctgtcgctgcagaagaccactctgatccccggagggtcggagtcgctggtgtacacc acgctgtcggggggcatcggcattctggtgccgttcacgtcacacgaggatcacgacttc ttccagcacctggagatgcacatgcgctccgagtttcctccgctgtgcggcagagatcac ctcagcttcagatcctactacttccccgtgaagaatgtgatcgacggcgatctgtgtgag cagttcaacagcatggatccgcacaagcagaagagcgtggcggaggagctggaccgaacg ccgcccgaagtctccaagaagctggaggacattcgcacccgttacgctttctaa

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