Xiphophorus hellerii (green swordtail): 116731284
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Entry
116731284 CDS
T07363
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116731284 (snx13)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116731284 (snx13)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
GLE1
DUF6395
Motif
Other DBs
NCBI-GeneID:
116731284
NCBI-ProteinID:
XP_032436871
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All DBs
Position
13:18637056..18660285
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AA seq
966 aa
AA seq
DB search
MFAEASLSIWGWGGLGVVLFFVTFGPFAIFYLAFYIFCFIGGGFAVTLLYGKINSEKHLE
KCEHSYLPPTQIGIPKTLDDMKLEVKPIKIDRRLTGSSFIDEPLQQVIQFALRDYIQYWY
YTLSEDESFLLEIRQTLQNALIQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQDRLA
DREDKQRDITDELVDSFFEAEVEMERKICRDVVCTSHRDEEGFLRDLCELLLYLLLPPGD
FHNKSMRYFLREVLAYGVLLPLINQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDKP
AELEAVKDKVLEELLYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLQSGKEVDAL
KLAASFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVEGYRVTAQQQLEAM
QSWQKDGKKQPGATKGLLKAAALGVYEQYLSDKASPRVQVDKELVTNLGEKLQKEDPTPE
IFDEVQRKVYEMMLRDERFYPSFKQSPLYVRMLAELDMLKEPSYRGSDDGDGESFNGSPT
GSLNLSLDDLSNSCHDEFLQLHAFISDTADSFLPGFWGAAGVCNDHGKTYALYAITVIRR
NPDGSEDSWKTYRRYSDFHDFHMRITEQFENLTSILKLPGKKTFNNMDRDFLEKRKKDLN
AYLQLLLNAEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLRSSMRNMSNAV
KSLPDSLAEGMNKVSDNMGRMSERLGQDIKQNIFKVPPLLPKSDIDPEHCRVSAQLDDNV
DDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYMTSP
EQVAEYVKKFRDSYWPNGILAETPPRRDKCIRMRTRVAAKTSLLGIMPDELKHIIGADTT
RKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIQRYSQKLQ
CSSLKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtccatctggggatgggggggtcttggagttgtgctgttc
tttgtaacctttggaccttttgccatattctacctggccttctatatcttttgcttcatt
ggaggtggctttgcagtcactttgctttatggaaagataaactcagagaaacacctggaa
aaatgcgaacactcttatttgccacccacacaaattggtatacccaagacactggatgac
atgaaactggaggtaaagccaataaagattgacaggagactgactggatccagtttcatt
gatgagccactacaacaggtgatccagtttgcgctgagggactatatccagtactggtat
tacactctgagtgaagacgagtcctttttgcttgagatcagacaaactctacagaatgcc
ctcatccagttctccacgcggtccaaagaggtggactggcagccttacttcaccacccgc
ctggtggacgacttcgccacccatttacgtgtctttagaaaagcccaggatcgcctcgcc
gacagagaggacaagcagagagacataacggatgagctggttgactcattttttgaggct
gaagtggagatggaaagaaaaatttgtagagacgtagtttgcacatcccaccgcgatgaa
gaaggttttcttcgagacttgtgtgagttgcttctgtatttgttactacctcctggagat
ttccacaacaaaagcatgagatacttcctgagggaggtgctagcatacggagtgctactt
cctctgatcaatcagctgagtgacccggactatattaaccagtttgtcatctggatgatt
cgggactcaagctgcaactatgaagccttcatgaacatcttgaagttgacagacaagccg
gccgagctggaagctgttaaagacaaggtgctggaggagctgctgtatctccgctcactg
gacacagctggagatgacatcaatgtgatcaaaaaccagattaacagtcttctgtttgtg
aagaaggtgtgtgagaccaggatccagagactacagtccggaaaggaggtcgatgccttg
aagctggcagccagttttggcaagctgtgcgttatcccactggatcacatcctcgtccac
aacatagcgctgcagttcttcatggacttcatgcaggcagcgggggctcaggcggagctg
ttcttttggctcactgtggagggatacagggtgacggctcagcagcagctggaggcgatg
cagagctggcagaaagatggcaagaagcagccgggggccaccaagggcctgctgaaggcg
gctgcactgggggtctatgagcagtacctttctgacaaggcgtctcccagggtacaggtg
gacaaggagttggtaacaaatctgggagagaagctgcagaaagaagaccccacgcctgaa
atatttgatgaagttcagagaaaagtctatgaaatgatgctacgtgatgagcgcttctac
ccgtccttcaagcagagtcccctgtacgtccgcatgctggcagagctggacatgctgaaa
gagccaagttacagaggatctgatgatggtgatggagagtccttcaacggctcgcctaca
ggaagcctaaacctgtcactggatgacctcagcaactcctgccatgatgaattcctgcag
ctacatgccttcatatctgacacggctgattcttttcttcctggcttctggggtgccgca
ggggtttgcaacgatcatggtaagacctacgcactttacgccatcaccgtgataagacgc
aacccagacggcagcgaggactcctggaagacataccgccgctactcagacttccatgac
ttccatatgagaataacagagcagtttgagaacctgacgtcgatcctcaagcttccagga
aagaaaaccttcaacaatatggacagagacttcttggagaagagaaaaaaagacctcaat
gcttaccttcagttgctgctaaacgcagagatggtgaaggcctgtccaactttgattccc
tacgtctatgacttcctagaaaacaaggcctacagcaagggcaaaggagagtttgcacga
aagatagacacatttgtgaatcctttgcggagctccatgaggaacatgtccaatgcagtg
aaatccctgccagacagcctggctgagggaatgaataaagtctctgacaacatgggccgc
atgtcagaaagacttggtcaggacatcaaacagaacatatttaaggtgcctccacttctt
ccaaaatccgacatcgacccagaacactgtcgcgtctctgctcagctggacgacaatgtg
gacgataacatccctctgcgagtcatgctgctcctaatggacgaggtgtttgatctcaaa
gagaaaaaccagtggctgcgcaggaacattaagaacctgctgcagcagctcatcagagcc
acttacggcgacacgatcaacaggaaaattgtggatcatgtcgactatatgacctctcca
gaacaggtggcggaatatgtgaaaaagttcagggattcctactggcctaatgggattcta
gctgagaccccaccgcgccgggacaagtgcatccgcatgaggacacgagtcgctgccaag
accagcctgcttggcatcatgccagacgagctgaagcacatcatcggagcggacaccacc
aggaagggcatcctccgcgtcttcgacatgtttcagtaccagcccatgaaccggcgccta
gtctacgtgttcctggagggcttcctggagaccatgttcccccagtacaaattccccgag
ctgttcgtcaagctgcactcccgttcgccgcgcattcaaagatacagccagaaactccag
tgctcctcgctgaagaggtga
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