Xiphophorus hellerii (green swordtail): 116731289
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Entry
116731289 CDS
T07363
Name
(RefSeq) zinc finger protein 687b-like isoform X1
KO
K24375
zinc finger protein 687
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116731289
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116731289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_ZNF592
zf-C2H2_11
zf-C2H2_jaz
zf-H2C2_2
zf-C2H2_ZN142
zf-C2H2_3rep
zf-C2H2_REST
zf-C2H2_6
zf-met
RNA_pol_3_Rpc31
zf-C2H2_PRDM15
zf-H2C2_5
Spt46
Motif
Other DBs
NCBI-GeneID:
116731289
NCBI-ProteinID:
XP_032436884
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All DBs
Position
13:complement(12445928..12461810)
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AA seq
1412 aa
AA seq
DB search
MGDMKTPDFDDLLAAFDIPDIDAKEAIQSAPDEAEGPHGPAGAPLGKQEGVVGVGSSLRP
PSPSDSQADTSIVSVIVKNKVRHEAVDGGDGDAEQHPIDMIAGADAGPRLGACGESEALN
HNGFGASGVSMPLSLGQNQSNGGPWSVNTPKASAEASSASTAKHHKQGGNIFNRLKPLVA
QGSGDPVGRARKMQLLQQQHQQQQDTGQERADAVKASLPSSSSVSAGSSSPTGLALPFFP
PSKPLLSAPPSAPSSQPLLSSQPFNGSPKGGAGGFQHQEEEDSDPDLGSPLVIQENPDSP
TSAQMSRRYKSDSVLSQPVSSAASQPKPGDTPSASTPQSGSVETQQVEERHPEHVIEERD
SPESPEPETPNSAAQVPAKRCSSPAVASTPPPPELRVPKEEEEEMEVGNGIDRVTDGKVD
KGENMEAEDGKAKPSSTDGGETGSAAPAPPGAPSRPLKVRIKTIKTSTGGITRTVTRVAS
KGGGKGLDPKGQTGEHRLLSNKTQKTDVSPGLMTTSSQKVSALNVLPVSTLAASSVMLAA
ATKVQNKMASSDKAKVSATAVSITKSAALPATPAVASSPKFSVAASGISVRTAANKTANG
GSGTISGNAVQPNKPASIVNSTGAVISRSQSSLVEAFNKILNSKNLLPSYKPDLSAPPPP
EWGLPVPATGYRCLECGDAFALERSLARHYDRRSLRIEVTCNHCAKRLAFFNKCSLLLHA
REHKERGLVMQCSHLVMRPVTVEQMIGQQDITPIGGLLTTSSSPPVSSPSATSGGAAVPA
GSSPMKDASSPAAAGPTRPVRRAPQGPQALMPLPCKKAEGLQYNNFKCPECQTQFSSKAE
LVTHFQQIRGAPSSTCSQCSPPMMLPNSCAVSAHQRIHKHKAPHVCPECGGTARQASFQT
HLEEACLHFARRIGYRCSSCQVVFGGLNSIKSHIQTAHCEVFHKCPSCPMAFKSSPSAQN
HISTQHPTLTGGQAKMIYKCVMCDTVFTQKPLLYMHFDTHLAKQKVHVFKCPDCTKLYAQ
KGSMMEHIKTAHRGPSAKPESQPDASNSSSAPTNSSSPSGLKSKSSAKPDTSDGEDWGRE
QEEEDEEEDDDDDEGDEDYEAPGGQSSGSAGVGGHSSAVSEWTCPQCQTTFTDNEDYLSH
VKMEHGKFPCRICGGTFSTSSSLRRHERVIHEGNKRIFHCQFCTEGKRTFGSRFLLDKHI
RLHHRTTDGQGPPLTRKRAATGGDGPGSSSELDGEVGPPAGRPADEEESATEDGGGVGPA
KRTRASVASTSSAPGELEDEDSVFRCVPCGFSTEDGAEFQRHIPQHRGDTAAFQCLQCGV
CFASAGSLSRHRFITHRVRDTQSDTERGAPRAPSSPSASPGGASPLAHLEDGDGNLGCKV
CGRRFDKAKDLNTHFRTHGMAFLTAHKTDKPQ
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatgaagaccccagattttgatgacctattggcagcgtttgatatccctgac
atagatgccaaagaggccatacagtctgcgccggatgaggccgagggcccccacggaccg
gccggtgcgcccctgggaaagcaggaaggcgtggtgggcgttgggtcctccctgaggccg
cccagtccctcggattcccaggcggacacctccatcgtgagcgtgattgtgaagaacaaa
gtccggcatgaagccgtagacggcggggacggagatgcggagcagcaccccatcgatatg
atcgcgggggcggatgccggtccccgactcggtgcctgcggcgaatccgaagcgctcaat
cacaacggttttggagcttccggtgtttccatgcctctttccctcggccagaaccagtcc
aacggagggccgtggtccgtgaacactcccaaagcgtccgcagaagcgtccagcgccagt
acagccaagcatcacaagcagggcgggaacattttcaacagactcaaacctctggtggcg
caggggtctggagatccggtgggtcgggccaggaagatgcagctcctccagcagcagcac
cagcagcagcaggacacgggccaagagagggcggatgctgtcaaagcctcgcttccttca
tcttcctccgtgtcggccgggtcgtcctctcccaccggactcgccttgccgttctttccg
ccgtccaagcctctgctttcagctcctccttctgcaccttcatcgcagccactgctctcg
tctcagcctttcaatggctccccaaaaggaggagctggcggattccagcaccaggaggag
gaggattccgacccagatctggggagtcctctggtgatccaggagaaccccgactcgccg
actagtgcgcagatgagcaggcgatacaagtctgattctgttttgtcgcagcccgtgtcc
tccgctgcgtcccaaccaaaacctggggacactccttctgcgtccactccacagtctggc
tcagtggagactcaacaggtggaggagagacatccagaacatgtaatagaggagagagat
tcacctgagagccctgagccggagacgccaaattcagctgctcaggtcccggcaaaaagg
tgctccagccccgccgtggcgtccactccgcctccccctgagctgcgggtgcctaaagag
gaggaggaagagatggaggtgggaaacggcatcgatagggtcacggatggcaaagtggac
aagggagaaaatatggaggcagaggatggaaaggctaaaccatcttccactgatggagga
gaaacaggaagtgctgctcctgctccccccggagctccatcccggcccctcaaagtcagg
ataaaaaccattaaaacctccacaggcgggattaccaggactgtgaccagggtggcgtca
aaaggcggtggaaaaggcttggatcctaaaggtcaaactggggaacacaggcttttatca
aacaaaacgcaaaagactgacgtttcccctggcctcatgacgacatcttcccaaaaagta
agcgctctgaacgttctgcctgtttctacactcgcagccagcagcgtcatgcttgccgcc
gccacaaaggttcaaaacaagatggcttcttcggacaaggcgaaggtttcggccacggct
gtcagcatcaccaagtccgccgccctgccggcaacgcctgcggtggcttcctcccccaag
ttctctgtcgctgccagtgggataagcgttcgcacggccgccaacaaaacagccaatgga
ggcagtggcaccatctcgggcaacgccgtccagccaaacaagcccgcctcaatagtcaac
agcactggcgccgtcatctcccgcagccagtcgagtctggtggaggctttcaacaaaatc
ctgaacagcaaaaacctcctgccaagctacaagcccgacctctcggcccctccgccgccc
gagtgggggctccccgtgcccgccacaggttaccgctgcctagagtgcggagacgcattc
gctctggagcgcagcctagcacggcactacgaccggcggtcgctccgcatagaggtcacc
tgcaaccactgtgccaagaggctggccttcttcaacaaatgcagcctgctgctgcatgcc
agggagcacaaggagcgtggcctggtgatgcaatgctcgcatctggtcatgaggcccgtc
accgtggagcagatgattggccagcaggatataacaccgattggtggcctgctcactact
tcgtcctctcctccagtctcctctccctctgccacatcagggggtgccgctgtccccgcc
ggctccagtcccatgaaggacgcctcgtctccagcggcagcaggtccgacgcgacccgtc
cgccgtgctcctcaggggccgcaggcattgatgccgcttccctgcaagaaggccgagggg
ctgcagtacaacaacttcaagtgtccagagtgccaaacgcaattctccagcaaggcggag
ctggtcactcacttccagcagatcagaggtgctcccagctcgacctgcagccagtgctcg
cctcccatgatgctccccaactcatgtgccgtgtctgcccaccaaaggatccacaaacac
aaagcgccgcacgtttgtcccgagtgtggtgggacggcgcggcaggccagcttccagacc
cacctggaggaggcgtgtctgcacttcgccagacgcatcggctacaggtgctcaagctgc
caggttgtatttggaggtctgaactccatcaagtcccacattcagacagctcactgcgag
gtcttccacaagtgccccagctgccccatggccttcaagtcctcccccagtgcccagaac
cacatcagcacccagcacccaacactaactggaggacaggccaagatgatctacaagtgt
gtgatgtgtgatacggtttttacccagaagcccctgctgtacatgcactttgacactcat
ttagccaagcagaaagtgcatgtgttcaagtgtcccgactgcaccaagctctacgcccag
aaggggtccatgatggagcacatcaagacggctcacagaggcccatcagccaaacccgag
tctcagcccgacgcctccaactcctcctcagctcccaccaactcctccagtccttccggc
ctcaagtcgaaatcctctgcgaagcccgacacctcggacggcgaggactgggggcgggaa
caggaggaggaagatgaggaggaggatgacgacgacgatgaaggggatgaggactacgaa
gccccgggaggccagtcttccggcagcgcgggggtcggcggtcattccagcgccgtgagc
gagtggacctgccctcagtgtcagaccaccttcaccgacaacgaagactacctgagtcat
gtgaagatggagcacggcaagtttccctgccgtatctgcggcgggacgttcagcacttct
tccagcctgcggcgtcacgaacgagtcattcatgagggcaacaaaaggatcttccattgc
cagttttgcacagagggcaaaagaacatttggcagccggttcttgttggacaaacatatc
cgactccatcacagaacaacagacggacaaggtcctcctctgaccaggaagcgagctgcc
acaggaggcgacggaccgggcagctcctcggagctcgacggcgaagtcggacctcctgca
ggccggccagcagacgaggaggagagcgccacagaggacggcggcggcgttggccctgca
aagagaaccagggcatcggtggcgtccacgtcatcagcgcctggcgagctggaggacgag
gacagcgtcttccgctgcgtcccctgcggcttctccacggaggacggcgccgagttccag
cgccacatcccgcagcaccgcggcgacaccgccgccttccagtgcctgcagtgcggcgtc
tgcttcgcgtcggccggctccctcagcaggcaccgcttcatcacccaccgggtgcgagac
acgcagagcgacacggaacgcggcgccccgcgcgcccccagctcgccgagcgcctccccc
ggcggcgcctccccgctggcacacctggaggacggcgacggaaacctgggctgcaaggtg
tgcgggcggcgcttcgacaaggcgaaggacctcaacacgcacttcaggacccacggcatg
gccttcctcaccgcacacaagacagacaagccccagtag
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integrated database retrieval system
