Xiphophorus hellerii (green swordtail): 116731356
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Entry
116731356 CDS
T07363
Symbol
trit1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
xhe01006
]
116731356 (trit1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116731356 (trit1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
116731356 (trit1)
Prenyltransferases [BR:
xhe01006
]
Compound prenylation
tRNA dimethylallyltransferase
116731356 (trit1)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
116731356 (trit1)
Prokaryotic type
116731356 (trit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
zf-C2H2_jaz
zf-met
AAA_33
AAA_16
AAA_28
AAA_22
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
116731356
NCBI-ProteinID:
XP_032436988
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All DBs
Position
13:22809165..22849134
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AA seq
468 aa
AA seq
DB search
MAASTLRVQCVLRRATVPSLVVILGATGTGKSKLAIEIGKRLQGEIISADSMQVYKGLDI
ITNKVTAEERAQCAHHMLDFVDPLVRTYTVVDFRNKALELVGDMHSRNKLPIVVGGTNYY
IESLLWKVLLDTGQENEDSGDGADGGQSRKMELEKLGGEELHKRLAEVDPKMASMLHPND
KRKIARSLQIHNDTGVPHSHWLEEQRQGGDGLGGPLRFPDPCIFWLHADMAALDQRLDAR
VDEMLATGLLEELRDFHLRYNRQKVQDDSQDYQHGIFQSIGFKEFHDYLTAPESSSQQEK
DKLRDKGVEALKIATKRYARKQNKWVCNRFLKRPGDSVPAVYSLDVTDVSRWEESVLKPA
LQILDSLSKGEEPAFPPIRLQGQRRNKRSHHTCDACDKIIIGDVEWSAHLKSKKHHYHVR
KKRKSDPGSDPPQSTTAQAAHEVLDGTETPQASSKESRTEHTDVPGIR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccactctgcgcgtgcagtgcgtcttacggagagcgacggtcccgtcttta
gtcgtgatcctgggagccaccggtaccgggaagtccaagctggcaatcgagatcggaaag
cggcttcagggagaaataatcagcgccgactccatgcaggtgtacaagggtctggacatc
atcacaaataaggtgactgccgaagagcgcgcccaatgcgcacaccacatgttggacttt
gtggacccgttggtgcggacctacacggtggtggacttcaggaacaaagcgctggagctc
gtcggtgacatgcacagcagaaacaagctgcccatcgttgttggaggaacaaactattac
atcgagtctctgctgtggaaggtcctgctggacacggggcaggagaacgaggactcgggg
gacggagcagacggaggccaaagcaggaagatggagctggagaaactgggaggcgaggag
ttgcataaaaggctggctgaggtggaccccaaaatggcctccatgctgcacccaaatgac
aagcgcaagatagccagaagtcttcagattcacaacgacacgggtgttcctcacagccac
tggctggaggagcagaggcagggcggcgacggcctgggagggcccctgaggttccccgac
ccctgcatcttctggctgcatgcagacatggcggctctggaccagcgcttggacgcccgt
gttgatgagatgctggctacaggcctgttagaggaactccgggatttccatctccgatac
aaccgacagaaagtccaggacgacagccaagactatcagcacgggattttccagtcgatc
ggctttaaggagttccacgactacctgacggctccggagagcagcagccagcaggagaaa
gacaagctgagagacaaaggcgtagaagctttgaagatcgccacaaagcgctacgcccgc
aaacagaataagtgggtctgcaaccgtttcctcaaacgaccaggcgacagcgtcccggct
gtgtacagcctggatgtaactgacgtgtccagatgggaggagtcggtgctgaagcctgca
ctgcagatcctggacagtctcagcaagggtgaggagccggctttcccccctatcagactg
caggggcagcggagaaacaaacgcagccaccacacctgtgacgcgtgtgacaaaatcata
atcggagacgtagagtggtcagctcacctgaaatccaaaaagcatcactatcatgtaagg
aagaagaggaagtccgatccaggaagtgacccgccccagagcaccactgcacaagctgct
catgaagtactggacggcactgaaacccctcaggcttcttccaaagaatcgaggacggag
cacacagacgttcctgggatacgatga
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