Xiphophorus hellerii (green swordtail): 116731409
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Entry
116731409 CDS
T07363
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116731409
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116731409
04082 Neuroactive ligand signaling
116731409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116731409
Ion channels [BR:
xhe04040
]
Ligand-gated channels
Glutamate (ionotropic)
116731409
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF8168_N
DUF2057
Motif
Other DBs
NCBI-GeneID:
116731409
NCBI-ProteinID:
XP_032437015
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All DBs
Position
13:4059410..4266426
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AA seq
1973 aa
AA seq
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MVAPRPTLSLLLAILACTGPARPSPPLLLRPRERERDSGGINIAVVHSGSSLLPETAVVG
GAGVGEPGLGSGLGNGPGGGGGGGGRGVTDTASLAGVVAMASLSSSTYLSLAALSTETVM
TPSGQANVIYLAVNESSPGTLLLQLCELLATTPLQGLVFEEERPPPPNRAPLAPMLEFVS
AQTGVPVVAVGGGASLGREPQESGSIYLQFTCSTMLQLEVIFEVLEEYDWTSFSVVTTRH
HGYEDFLAMVEGMTDGSFIGWERKSVVVLNVTDDPGGSRTKRLLKDNEAQVRLLYSSLEE
AELIFRAAWAAGQAGPSHMWFVVGPALSGLGLEGLPKALFAIRPQGWRDEPRRRIAKGVS
VLTHGAMALRRDQGANSRAQYAGNCQSDGNQTHRVPDRIRYFTNISLSGRDYSFNSDGYL
SNPLIDVISYTNGRGWEEVGWWENGHLRLRYHPWSRYGSFLKPLDDAQHLRVVTLEERPF
VIVEPADPGTSSCIRDSVPCRLPINSSLVLDGAAPMKHCCKGFCIDVLKRLAKIVGFTYD
LYLVTNGRHGKNIDGEWNGMVGEVVSNRADMAIGSLTINEERSEVVEFSVPFVETGISVM
VSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSAKKSGG
SKFTIGKSVWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQE
EYIDTVSGLSDKKFQHPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQYMIRNNQKGVEEA
IDNLKSGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLD
LALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFA
WEHLVYWKLRHCVKRSGGMDFLLALSRGMYSCCQFEDEMAPGGSKSSLPQYHSVTTIPSV
PQQHLVTATVNNTTAIAMVQQQQQQKHHQQQQGQTYTTMLPGSPAATGHSAMALGPSNSP
LLEGPMPCSTFLPRHDRRLAVVDRWNRPKPEKIMSGSSSGGVGVGGIAGGITELQAQQQY
QQNLGTHWSLQVGVPGGGDTGLDEYKRYYGPIDPEGLGANLDQQVGGPQQTTKANSRGFK
APGMPRLPAKGSQQGHPIPKPPPPLPSSPRRPPFWRRGSLAQARRKGSGGPLYENILPLG
RRGGGRYGAGDGVGRRGRRPPPPPPLPVPISSPTHTPTTPSSPCRFYSSCTSASSSSSSS
SSSSSSSSSSGSLSRSNSPSSCSSDSSYNSSLSFRYRAGDRDFMVDDDYDSDLLTEESSL
LLGSRKKIRSRRMSSRSLPCSPPPPPVPPRKPHPQRNFGRERTSSQLAQLQEWWASWGDR
ERARGGISNKDGAVSRDEKRQHKERERERKRRKKGRKKKKREERERERERKHRKAKKKRK
KEDKTRKRERKRADQEVGDPEKREEVKSATPDFPSYPPLRRESFRKKSESSIKSYGWNIP
GEDERKDRNEKERDGGEESRGKDRHHRRRNSKNQHSSSKASTSVKFWRGGNPSSDAMPSA
FLPLLPVSSKRRKSKSSDRDAVGMEGERRPLLGRNERGEMHSKEGLSFHEWESEVEDEEE
NSESDRRKVERGKRHRGGRTISEEERERDKVVGIYSDDDGSSGEFGKFERYWEDHEGRAV
GGIGGGGWFFSTYPSRDKAGSVNSRDDLFQERGERWGTAESGWGSSAGGGGRGERDWGSG
SQWPPPPLTPPPPRRYWSVDKLHIQDEKKSKRKSKDKSRGHTACSSCHSPRHHPHSSKWA
RVTSRSQEELYHHCQSFGGPLKPKHDSLSSSKPDRSHNLSKFGSQSNLSIQQRTQRTEKD
RDRGRQPSPPSSLVSNLPSQLPALPAPPSSSHSIHAPLPTSSSSVSSPSVVSSAPGAIQA
SSMASASAKLQYQRLRSVPQPQRFPQSPHLPLKAKSLCSRRGSAHFSSVESEV
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atggtggccccaaggcccaccctctcattgctactggctatcctggcctgcacggggccc
gcacgcccctcgccccccctgctgctccggccccgggagagagagagggactcgggtggt
atcaacatagccgtagtccactctggctcctccctgctcccggagacggcggtggtggga
ggcgcgggggttggcgagccgggtctcgggtccggtctgggaaacggtccaggaggagga
ggcggcggaggaggaaggggggtgacagatacagcctcacttgcaggagttgtggccatg
gcctctttgtcctcctcaacatacctgtcgctggcagcactttccacggagacggtgatg
acaccatcaggtcaagcaaacgtcatctacctggcagtgaatgagagcagtccaggcaca
ttgctgctgcagctgtgtgagctgctggccactacacctctacagggtttggtgtttgag
gaggagagaccacccccgccaaaccgtgctcctctagccccaatgctggagtttgtctcc
gctcagactggagttcctgttgttgctgtcgggggaggagccagtctaggccgagagcca
caggagagcggctcaatctaccttcagttcacttgctctacaatgctccaacttgaggtg
atcttcgaagtccttgaagaatatgactggacttcgttctctgttgtcaccacccgtcac
catggctacgaggacttcctggccatggtggaaggtatgacagatggctccttcattggc
tgggaaaggaagagcgtggtggttcttaacgtgacagacgaccccggcgggtctcgcacc
aaacgactcctcaaagacaatgaagcccaggtccgtctgctgtactcctccctggaagag
gctgagctgatttttcgggcagcctgggcagcaggtcaggctgggcccagtcacatgtgg
tttgtcgttggacccgccctgtctggactgggattggagggactgccaaaagccttgttt
gccatcaggcctcagggctggagggacgagccacgaagacgtattgccaagggagtttca
gtgctcactcatggggcgatggctctacggagggaccagggggccaacagtcgagcccag
tatgcagggaactgccagagtgatggaaaccagacccaccgagtgccagacaggatcagg
tatttcaccaacatttccctcagtggacgagattattccttcaacagcgatggctacctg
tccaatcccctgatcgatgtcatttcctacaccaacggcagaggctgggaggaggttggc
tggtgggagaacggacacctgcgcctgcgttaccatccttggtctcgctacggctccttc
ctgaagcctctggacgatgctcagcacctcagagtggtcaccctggaggagaggcccttt
gtcatcgtggagcctgctgaccctggaaccagctcctgcatccgggactctgttccctgt
cgcttgcctattaattccagtttggtgttggacggagctgcacccatgaagcactgctgt
aaagggttttgcattgatgttctaaagcgcttggctaagattgtaggcttcacctatgat
ctttacctagtgacaaatggcagacatgggaaaaacattgatggggagtggaacggcatg
gttggagaggttgtatccaacagggctgacatggccataggttccctcaccattaatgag
gagaggtcagaggtcgtggagttctctgttcctttcgtggaaaccggcatcagtgtcatg
gtttctcgcagtaacggcaccgtgtccccttctgcttttcttgagccctacagcccggcg
gtgtgggtgatgatgtttgtgatgtgcctgtcagtggtggctgtcaccgtcttcatcttt
gagttcttcagccccgtgggatacaaccgtagcctgcagagcgccaagaaatcgggggga
tccaagttcaccattggtaaatctgtttggctgctctgggcgctggtttttaacaactct
gttcctgtagaaaatcccagaggaacaaccagcaagatcatggtgctggtttgggccttc
tttgctgtcattttcttggcctcctacactgccaacctggctgccttcatgatccaggag
gagtacattgacacggtgtcagggctgtctgataagaagtttcagcacccgacagagcag
tacccaccactgcgctttggtacagtgccgaatgggagcaccgaggagaacatccgctcc
aactatcccaacatgcaccagtatatgatccgcaacaaccagaaaggtgtggaggaggcc
attgacaacctaaagtcgggaaaactagatgcctttatttatgatgctgctgtgctgaac
tatatggccaggaaggatgagggctgcaaggtgatgaccattgggtctgggaaagtgttt
gccaccacaggctatggcatcgccctgcacaagaattctcgctggaaacgaccattagac
ttggctctgctgcaattagttggagatgatgagatcgatatgctggagcgcctctggctg
tctggaatttgccacaatgataagattgaggtgatgagtagtaagctggacattgacaac
atggcaggggtattctacatgctgctggtggccatgggcctcagtctcctggtgtttgcc
tgggagcatttggtgtactggaaactaaggcattgtgtcaaaaggtctggagggatggac
tttctcctggctcttagcagggggatgtacagttgctgccagtttgaggatgaaatggca
ccgggagggagcaaaagctctttgcctcaataccactctgttactactatccccagtgtc
ccccaacaacaccttgttacagccacagtgaacaacacaaccgctatcgccatggtgcaa
cagcaacaacagcagaagcaccaccaacagcagcaagggcagacctatacaactatgtta
cctggatcaccagcagctacaggacattcagcaatggctctgggtccttccaatagccct
ttattggaaggccccatgccttgctccaccttcctgcctcgtcatgaccgcagattggct
gtggttgatcgctggaacaggccaaagccagaaaaaataatgagcggaagcagcagtgga
ggagtgggtgttggtggaattgcaggtggcatcactgaactgcaagcacagcagcagtat
caacagaatcttggaacacattggagcctccaggtaggggttcctggtggaggtgacaca
gggctagatgaatataagcgctactatggtccaatagacccagaggggctaggggctaac
ttggaccaacaagtaggaggtcctcaacagactaccaaagccaattctcgaggttttaaa
gccccggggatgccacggctgcctgcaaaaggctctcaacaaggacacccaatccccaag
cctcctcctccactcccatcttctccacgaaggcctcccttttggcgacgaggaagcctt
gctcaggcaaggagaaaaggctcaggaggtccactttatgagaatatactccctctaggg
agacgaggaggtggaaggtatggggcaggtgatggagttggcaggcgaggacgccgacct
cctccacctcctccacttcctgtgccgatttcttcccctacacacacccctactactcct
tcgtctccatgccgtttctactcatcttgcaccagtgcctcgtcttcttcctcttcttcg
tcttcatcctcatcatcttcttcatcctctggatcactttctcgatcaaattccccctca
tcatgctccagtgacagctcctacaactcctcactcagtttccggtaccgagcaggagat
cgtgattttatggtggatgatgattatgactcagatcttcttactgaggaatcaagcctt
cttcttgggtcacggaagaaaattcgttcccggaggatgtcatcgcgctcattaccatgt
agtccaccacctcctccagtccctccccgaaaaccacatccacagagaaattttggaaga
gagagaaccagcagtcaactggcgcaattgcaggagtggtgggcatcatggggtgacaga
gaacgagcgagaggagggatatcaaacaaagatggagcagtgagtagagatgagaaaaga
caacacaaagagagagagcgggagagaaaaaggagaaagaaaggacgaaaaaagaagaag
cgagaggaaagagagagagaaagggagcgtaagcaccgcaaagcaaagaagaagaggaag
aaagaggataagacaagaaaaagagagcgaaaaagagcagatcaagaggttggagatcca
gaaaagcgggaggaagtcaaatcagcaacaccagatttcccatcttacccaccattgagg
cgggaatcatttcggaaaaagagtgaaagctctatcaaaagctatggatggaacatccct
ggtgaagatgaaaggaaggatagaaatgagaaagagagagatggtggagaagagagtaga
ggaaaagacagacatcacaggagaagaaacagcaagaaccagcatagctctagtaaggct
tctacatctgtcaagttctggcgaggaggtaatccatcttctgatgccatgccatctgcc
tttctgcccttgttaccggtgtcttctaaaagaaggaaaagcaaaagctcagacagagat
gctgtgggcatggagggagagaggaggccactgctgggaaggaacgaaagaggtgaaatg
cattccaaggaaggattgtcttttcatgagtgggaatctgaagtagaggatgaggaggaa
aattctgagtcagacaggaggaaagtagaacgtggaaaaaggcatagagggggtaggaca
atatcggaagaggagcgtgaacgtgataaggtagttgggatatactctgatgacgatggg
tcttcaggagaattcgggaagtttgagaggtattgggaggatcatgaaggtagggcagtg
ggtggaattggaggagggggttggttttttagcacatatccctctagggataaagcaggc
agtgtcaacagcagagatgacctcttccaagagcgaggagaaagatggggaacagcagag
agtgggtggggatctagtgcaggtgggggaggtagaggagagagagactggggatcaggt
tcacaatggcctccgcctcctctcaccccaccaccaccccgtcgatactggtcagtagac
aagcttcacatacaagatgagaagaaaagtaagcgcaagtctaaggacaaaagtaggggg
cacactgcttgctcctcctgtcattcacctcgacaccatccacattcctctaaatgggct
cgtgtgacttcacgaagccaggaagagctgtaccaccactgccagagttttggtggtccc
ttgaaaccaaaacacgactccttgtcatcatccaaacctgatcgatcacacaatctttct
aaatttggtagccagtcaaacttaagcatccagcaaaggacacagagaacagaaaaggat
cgagatcgaggaagacaaccatccccgccttcatctcttgtatcaaacttgccatcacag
ctcccagcccttccagctcctccgtcctcatctcactcaattcatgctcctctccctacc
tcctcctcatctgtatcctctccctcagtggtttcatctgcaccgggagcaatccaggcc
tcttcaatggcttcggcaagtgccaaactgcagtaccagagactgcgctctgtaccccaa
ccccagagatttcctcagtctcctcacttacccctaaaagccaagagcctttgctcacga
aggggctcagctcatttctctagtgtggagagtgaagtgtga
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integrated database retrieval system
