Xiphophorus hellerii (green swordtail): 116731428
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Entry
116731428 CDS
T07363
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like isoform X1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116731428
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
116731428
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
116731428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
Ank_2
IBR_2
Ank
Ank_5
UBA_ARI1
Ank_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
116731428
NCBI-ProteinID:
XP_032437052
LinkDB
All DBs
Position
13:16218160..16240233
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AA seq
1262 aa
AA seq
DB search
MGNTATKFRKALVSGDEALAWQLYEGNPQFRDSLDPNASYGEQYQHNTPLHYVCRHAMTR
LLRSFLFSKEGNPNKRNVHNETCLHVLCQGPQILLLPEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLEGGQYEKANVNATDNHHSTCLHYAAAAGMKSCVELLIQSEADLFVEDEDK
LTPCDHAERHHHTDLALSLESQMVFSCSSARQSNGDTHGESRLPQYKEPYEGLKIQDLRR
LKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDAEGCCQRSGVTMPTPPPSG
YNAWDTLPSPRTPRTPRSPLTLTLTSPTDSCLTPGEEGLATCGICLCSISVFEDPIDMSC
GHEFCRCCWEGFLNIKIQEGDAHNIFCPAYECYQLVPVHVIESVVSREMDQRYLQFDIKA
FVENNPSIRWCPAARCERAVRLTRPGPGDSDPHSFPLLPSPAVDCGKGHLFCWECLGEAH
EPCDCQMWRNWLQKVTEMKPEELAGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCN
HMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQLEEQSKEMTVEAEKKHKSFQ
ELDRFMHYYTRFKNHEHSYKLEQKLMKTAKEKMEQLSRAFISREGTPPDTRFIEDGVTEL
LKTRRVLKCSYPYGFFLQQGSTQKEIFELMQTDLEMVVEDLAQKVNRPYLRTPRHKIISA
ARLVQQKRQEFLASVARGVAPNDSPDPPRRNYPGGSWEWEYLGFASPEMGSRHSVLGAGD
HRERQSQDYADIQYRRRHRPRRRGDMLSLHNLRSSSNTPETSRRSDNTDPAERTEGRRRA
LGSLDEDDPNILLAIQLSLQESRREQGLDGGAERRPGTAGDLADVALHSLNMEDPPGARG
PSFPTSLLDPPRPPNRTDSTTMQPSVLSSLPLPPPPPTLSAELLELGDSLMKLGNITTPY
MDPEPARSRGVLAAPYSDCSHRPDQNTSTPHAILDQIAVTDPHHDSKEPSYSGSYSAESE
HTASCALDCSHNPPHPGAYGRDPDEAERSYQPGSSYTAEHPSTYALDPPRSDPQPPVQLC
LPSPELEPELLLSPVIPPGGPFTPSDPQSLQALDPTASAQLLDNIMAWFNNNINPQNNPQ
NLALIPSPPTTETDSSPDTHTGAEKDGTAAPVWQPLEGAPRAAASGGREAPKRPDSLELE
NRDVREEGVSAGCVSDLSLDEEHTHPRSNGQADPAAESEADTVLQLERGGSSEKWEEQEH
LV
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacacggccaccaagttccgcaaggcgttggtgagcggcgacgaggcgctggcc
tggcagctgtatgagggcaaccctcagttcagggacagcctggacccgaacgcatcatac
ggagagcagtaccaacacaacacacctctgcattacgtatgccgccatgccatgacgcgg
ctgctcaggtcgttcctgttcagcaaagagggaaacccaaacaagcgtaatgtgcacaac
gagacatgcctccacgttctgtgccaaggcccacagatcctgctgctgccagagggagcg
ctctctccacggcttgcccgaccgcagagggacgagcagcgccgcgcagactgcctccag
atgatcctgagctggaccggcgccagactggaaggaggccagtatgagaaggccaacgtg
aacgccactgacaaccaccacagcacctgcctgcactacgccgctgctgcaggcatgaag
agctgcgtggagctcctgatccagagcgaagctgatctctttgtggaggacgaggacaag
ctgacgccttgcgaccacgccgagcgacaccaccacaccgacttggcactcagcttggag
tcgcagatggttttctcctgctcctcggctcggcagtcaaatggagacacacacggtgaa
agccgcctgccgcaatacaaggagccttacgagggactgaagattcaggatctgcgccga
ctgaaggacatgctgatcgtagagactgcggacatgctgcaagctccacttttcacagcg
gaagccctacttcgagcacatgattgggacagagaaaagcttctggaagcctggatgtct
gatgctgaaggctgctgccagcgctctggcgtcaccatgcccaccccaccacccagcggc
tacaatgcctgggacaccctgccgtctccccgcactccgaggacgccgcgctcaccccta
acgctcaccctcacctcccccaccgacagctgcctgacaccaggagaggaaggcctggct
acgtgtggcatctgtctctgctccatctcagtctttgaagacccgattgacatgtcctgt
ggtcatgagttttgcagatgctgctgggaggggtttctgaacataaagattcaggaaggt
gatgctcacaatatcttctgcccggcctacgagtgttaccagctggttcctgtacatgtg
atagagagcgtggtttctagagagatggatcagcgctacctgcagtttgatatcaaggcc
ttcgtggaaaacaacccatccatccgctggtgtcccgcggctcgctgtgagcgagcggtg
aggctcaccagaccgggccctggagacagcgacccccacagcttccccctgctgccatcc
ccagctgtcgactgtggcaagggtcacctgttctgctgggaatgccttggtgaggcccac
gagccatgtgattgtcagatgtggaggaactggctccagaaagtcacagagatgaagcct
gaggaattggcaggagtgagcgaggcgtacgaagatgccgctaactgcctgtggttgttg
accaactccaaaccgtgtgccaactgcaagtcgcccattcagaagaatgagggctgcaac
cacatgcaatgtgccaaatgtaaatatgatttctgctggatatgcctagaggagtggaag
aagcacagctcgtccacgggaggctactatcgttgcactcgctatgaggtcattcagcag
ctagaagagcagtccaaagagatgactgtggaggcagaaaagaagcacaaaagtttccag
gagctggaccgtttcatgcactactacactcgcttcaagaaccatgaacacagttacaag
ttggagcagaagctgatgaaaacggcaaaagagaagatggagcagctgagcagagccttt
attagccgtgagggcactcctccagacacccgttttatcgaggacggtgtgactgagctg
ctgaagacgcgccgcgtgctgaagtgctcttacccatacggcttctttctgcagcagggc
agcacgcagaaggagatatttgaactcatgcagacggacctggagatggtagtggaggat
ctggctcagaaggtcaatcggccgtacctcaggacgccacggcacaaaataatcagcgca
gcgcggctggtgcagcagaagcggcaggagtttctggcgtctgtggcccgcggcgtcgct
cccaacgactctcctgatccgccccgcaggaattaccctggaggatcatgggagtgggag
taccttggctttgcatcacctgagatgggaagccgtcactctgtactgggagcaggagat
cacagagagagacagtcgcaggattatgctgacatccagtaccggcgcagacacagacca
cgacgcagaggagacatgctgagtctgcacaacctcagaagcagcagcaacacgccggag
accagcaggaggagcgataacacagatccagcagagaggacagaaggtcgccggagagcc
ctgggctcccttgacgaagacgaccccaacatcctcctcgccatccagctgtcgcttcag
gagtcccggcgagagcagggcctggacggcggcgcggagaggagaccggggacggcgggc
gatctggctgacgtcgctttgcactccctcaacatggaggatcctccgggagcccgaggc
ccctccttccccacttccctgctggatcctcctcggccccccaacaggacagactccacc
acgatgcagccatccgtgctcagctccctccccctgccgccccctcctcccacactcagc
gccgagctgctggagctgggagacagccttatgaagctggggaacatcaccactccttac
atggacccggagccggcacgcagccgcggcgttctcgccgctccttacagcgactgcagc
cacagaccggaccagaacacatcgactccacacgccattctggatcagatcgccgtcaca
gacccccatcatgacagcaaagagccgagctacagcggctcctattcagctgagagtgaa
cacactgcctcctgtgcgctggattgctctcataatcccccccatcctggcgcttacggc
cgggatccggacgaagcagagcgctcctaccagccaggaagctcctacaccgccgaacat
ccctccacctatgctctggacccgccccggtccgacccccagcctcctgtccagctgtgc
ctcccatcgccagagctggagccggagctgctgctttcaccggtgattccaccagggggc
cctttcacccccagcgacccccagagcctgcaggccctggaccccacagccagcgctcag
ctgctggacaacatcatggcctggttcaacaacaacatcaacccccagaacaacccccag
aacctggctctcatcccgtccccgcccaccacggaaacagactcctcccccgacacgcac
accggtgccgagaaggacgggaccgccgcaccggtctggcagcccctggagggcgcgccc
agagcagcagccagcggcggccgtgaggccccgaagaggcccgactctctggagctggaa
aacagagacgtcagagaggagggtgtgagcgcggggtgtgtgtcggacctgtcgctggac
gaagagcacacacacccgcggtcaaacggccaagctgacccggcggcggagagtgaagca
gacaccgtgctgcagctggagaggggcgggtcgtcggagaagtgggaggagcaggaacac
ttggtgtga
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