Xiphophorus hellerii (green swordtail): 116731433
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Entry
116731433 CDS
T07363
Symbol
hoxa1
Name
(RefSeq) homeobox protein Hox-A1
KO
K09301
homeobox protein HoxA/B/D1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116731433 (hoxa1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
116731433 (hoxa1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
116731433
NCBI-ProteinID:
XP_032437066
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Position
13:complement(20050315..20053300)
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AA seq
329 aa
AA seq
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MSSFLDYSVMSGEGGSCSIRAFHSDHGITAFQSCGAAVNSCGADEHFVANRTSPDSLHHQ
PASYQSSANTLGLSYGAHPACSSSYGPQSFCATYNHYTLNQEVDSGAAFPQCGPLMFSGN
LPSSMVPQHRHGYSATPLGQLQYSHAAYGGGHEQAPPYPGGSNPMSPLHAAHLEACCSPL
SEGGSSAQTFDWMKVKRNPPKTGRSGEYGYAGQPNTVRTNFTTKQLTELEKEFHFNKYLT
RARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLLPAKAPPAEREEIIPEKMDDAAS
ERSTSSSPSTPSPSSSTVSSTGTDTYASN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttcttagactactcagtgatgagcggagaaggtggctcatgctccatcagg
gctttccactcggaccacgggattacagctttccagtcctgcggggctgctgtcaacagc
tgtggggcggatgagcacttcgtggcaaacaggacttctcctgacagcctccaccatcag
ccggcgtcttaccagtcttctgcaaacactttgggtctctcctacggagcccacccggcc
tgtagctccagctatgggccccaaagtttttgcgcaacatataaccactacacgctgaac
caggaagtggactctggagctgcgtttccccagtgcggtccattgatgttttcgggtaac
ttaccctcctccatggttcctcagcaccgccacggttacagtgccaccccactgggccag
ctgcagtatagccacgctgcctacggaggcggacacgaacaagcacccccttaccctggt
ggctcaaaccctatgtcacctctgcacgcagctcacctggaggcttgttgttcacctctg
tcggagggcggctcctctgcgcagactttcgactggatgaaggtcaagaggaatccaccg
aaaacaggacgatccggggaatacggttacgcaggtcagccgaacacagtccggaccaac
ttcaccaccaagcagcttacagaactggaaaaggagtttcacttcaacaagtatctgacg
cgggcgcgccgcgtagagatcgcggccgcgctgcagctgaatgagactcaggtaaaaatc
tggttccagaaccggaggatgaagcagaaaaagcgtgagaaggaggggctgctgccggcc
aaagctccccccgcagaacgggaggaaatcatcccggagaaaatggacgatgcagcatct
gagaggtcgacctcgtcttccccctctactccctccccctcatcctccaccgtgtcttcg
acgggcactgacacttacgcctccaactga
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