Xiphophorus hellerii (green swordtail): 116731451
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Entry
116731451 CDS
T07363
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116731451 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116731451 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116731451 (vps28)
Membrane trafficking [BR:
xhe04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
116731451 (vps28)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116731451 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
116731451 (vps28)
Exosomal proteins of colorectal cancer cells
116731451 (vps28)
Exosomal proteins of bladder cancer cells
116731451 (vps28)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
116731451
NCBI-ProteinID:
XP_032437081
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All DBs
Position
13:16151989..16155568
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AA seq
223 aa
AA seq
DB search
MFHGIAGSGGVGSAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVSPSEYTASCSRLLVQYKAAFKQVQGSDVGSIDEFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccacgggatagcaggcagtggaggagtcgggtcagctccagctaacaaacctgag
ttgtatgaggaggtcaaactgtacaaaaacgcacgggaacgagaaaagtatgacaacatg
gccgagttgtttgctgttgtaaagaccttgcaggcattggagaaggcttacatcaaagac
tgcgtatcccccagcgagtacacggcttcctgctccagactcttggttcagtataaagct
gctttcaaacaggtgcaaggctctgatgtgggctccatcgatgaattctgcaggaagtac
agacttgactgcccgcttgcaatggagaggattaaggaagatcgaccaattaccatcaaa
gacgataagggcaacctgaaccgttgcatcgcagatatagtttctctcttcatcactgtt
atggacaagctgagactggagatcagagccatggatgagatccaaccagatctgagagag
ctgatggaaaccatgaacaggatgagcaacatgcctccagactctgaggcaaaggacaaa
gtgaacctctggttgaccacccttagcagcatgtctgcctcagatgagctggatgataac
caggttcgccagatgctctttgatctggaatcagcctacaacgccttcaaccgcttcctc
cactcttcctaa
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