Xiphophorus hellerii (green swordtail): 116731461
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Entry
116731461 CDS
T07363
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116731461
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116731461
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
Motif
Other DBs
NCBI-GeneID:
116731461
NCBI-ProteinID:
XP_032437095
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Position
13:complement(24834570..24855241)
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AA seq
519 aa
AA seq
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MRQWSVPTATLRVEPLPGCLSVSPPPSDPSMEACEVEPRYTIEQIDLLQRLRLSGMTKPQ
ILHALESLERLDPDHRPPPPPLPPRCDSHPAPPSNATPAAAPAPSSSSSSSSSSLSLASA
TTQTSGLEGAALSPSNSYEASPPPLYLPSVVVQRAFSYDMMGEEEWDLEEKVEEYMRRDS
NLVKEEIKTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERN
NPGLRWSESQHSVSPMARARAGDRDGTVAGASGTLPNIFPNPNTNLMPNHNPSWSRQREL
LVHLLPWYTAAAAAAAQPGATLSMRSLVKEEPDWRTGIIASDRAGIVGGPLRLRRGSRFT
WRKECQSIMESFFMENQYPDEAKREEIASACNSVIQKPGCKLSEFERVTALKVYNWFANR
RKEMKRRANIEAAILESHGIEVPSPSCHSNGEEGELQEFVDQVNHRFSEQEDATSQKIVD
QQDGSALITGEATAAPLSPDPQGAEQKDGDSKRESVDEE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtccgtccccactgcgacccttcgcgttgagccactcccggggtgcctg
tccgtgtcaccccctccgtcggaccccagtatggaggcgtgcgaggtggagccgcgctac
accatcgagcaaatcgacctcctgcagcgcctgcgcctctccggcatgaccaaaccccag
atcctccacgcactggagtccctggagaggctggacccggaccaccgcccaccgccgccc
ccgttgccgccacgctgcgactcccacccggccccgcccagcaacgccacgcccgccgcc
gcccccgccccgtcctcttcgtcctcctcgtcgtcgtcctcgctctctctggcctcggcc
accacccagacctcgggcctcgagggcgcggcgctgtcgcccagcaacagctacgaggct
tcgccgccgcccttgtacctccccagcgtggtggtgcagcgggcgttcagctacgatatg
atgggcgaggaggagtgggacctggaggagaaggtggaggagtacatgagaagagacagc
aacctggtgaaagaggagatcaagacgttcctgaacaaccggcggatctctcaggccatc
gtaggccaggtcacaggcatcagccagagctacatctcccagtggctgctgcagcaaggc
ctggagatgagcgactccaagcgcagagccttctaccgctggtacctgctggagaggaac
aacccaggcctgaggtggagtgaaagccagcacagcgtgagtcccatggccagggccagg
gcaggggacagagatgggacggtagcaggggcgagcggcaccctccccaacatcttcccc
aaccccaacaccaacctgatgcccaaccacaacccgtcctggagcaggcagagagagctg
ctggtgcacctgctgccgtggtacacagccgccgcagcggctgccgcccagccaggtgcg
accttgtcgatgcgctctttggtgaaggaggaacctgactggagaacgggtatcatcgcc
agcgacagagcggggatcgtaggtggtcctctgaggctgcgcagaggaagcaggttcacc
tggaggaaggagtgccagtccatcatggagagcttcttcatggagaatcagtatccagat
gaggcgaagcgcgaggagatcgccagcgcctgtaattctgtcatccagaaaccaggctgt
aagctgtcagagtttgagcgggtgacggcgttgaaggtgtacaactggttcgccaaccgt
cggaaggagatgaagagaagagcaaacatagaagccgccatcttggaaagccatgggatc
gaggtgccaagtccgagctgccactcgaacggcgaagagggagagctgcaagagtttgtt
gatcaagtgaaccatcggttctcagagcaggaggacgccacttcccagaaaattgttgac
caacaagatggctccgcgctgatcactggggaggcgacggcggccccgctgagccccgac
cctcagggggcagaacagaaggacggggattcaaaaagggagtctgtggacgaggagtga
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