Xiphophorus hellerii (green swordtail): 116731462
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Entry
116731462 CDS
T07363
Name
(RefSeq) ephrin-A1-like isoform X1
KO
K05462
ephrin-A
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116731462
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xhe04052
]
116731462
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116731462
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xhe00537
]
116731462
Cytokines and neuropeptides [BR:
xhe04052
]
Cytokines
Growth factors (RTK binding)
116731462
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Axon guidance molecules
116731462
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xhe00537
]
Others
116731462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
116731462
NCBI-ProteinID:
XP_032437098
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Position
13:complement(12003753..12024190)
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AA seq
221 aa
AA seq
DB search
MDLIWIAGFVASFCAWFASAERHSVYWNSTNPKFQRDDYAVEVKLNDYLDIVCPHYPLGE
VPQVDAERYVLYMVEREDYVSCKPQSYDQMRWECSHPFAPHAPEKFSEKFQRFTPFTFGK
EFRQGESYYYISKPLHHHGKECLKLRVDVIAADGSQEARVANKGTGGGGVGAGGGVHNPS
NKPAADDPVAVLPNVQSVHSAAASTSLSVVSLLVPLLLLLH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggatttaatttggattgcgggcttcgttgcgagcttctgcgcctggtttgcctcggcg
gagcggcacagcgtctactggaacagcaccaacccaaagtttcaacgggacgactatgcc
gtggaggtgaagctcaatgactacctggacattgtttgccctcactaccctctgggcgag
gtgccgcaggtggacgccgagcggtatgtgctgtacatggtggagcgtgaagattacgtg
tcctgcaagccccagtcatacgaccagatgcgctgggagtgcagccatccatttgctcct
cacgctccagagaagttctccgaaaagttccagcgttttactccattcacgtttgggaag
gagtttcgtcagggagaaagctactattatatctccaaacctttgcaccaccacggcaaa
gagtgtcttaagctgcgggtggacgtcattgcagctgatggctcccaggaggccagagtc
gccaacaaaggtacaggcgggggtggagttggagcagggggtggtgttcacaacccttcc
aacaaacctgcagcagatgacccagttgcagtccttccaaatgtccaaagtgtccactct
gcagctgcatctacgtcgctctcagtcgtctcattgctagtccctttactacttttgtta
cactga
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