Xiphophorus hellerii (green swordtail): 116731484
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Entry
116731484 CDS
T07363
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116731484 (sgce)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2_C
Sarcoglycan_2
DUF8210
Motif
Other DBs
NCBI-GeneID:
116731484
NCBI-ProteinID:
XP_032437145
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Position
13:complement(19120734..19139325)
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AA seq
475 aa
AA seq
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MLAAAATVLLGTVAYIVHAQEVTLREFHEGNVHSEQAAALLQRRTLYKDVVTILSRSHAD
RNVYPSAGVLFVHVLEREHFKGEFPPYPKSGDASNDPITFNTNLKGFPDRPGWLRYIQRT
PHGDGVLYGSPTAEHVGKPTVIEITAYNRRTFETARHNLVINIMATEEFPLPYQAEFYIK
NMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINNLKEGVYVMVG
ADVPFSSCLREVENPHNQLRCSQEMEPVISCDKKFRAQFHIDWCKISLVDINKVVPVYVS
RPDPGTGILPEFGEYNPPSESLRSPDYFFDFLVTLAVPSAVALVLFFILGYTMCCRREGV
EKRNMQTPAIQLVHHSSIQKSTKELRGMSKNREISWPLSTLPVFNPVSGEVVPPIHPDNY
ETTSMPLMQTQANLQNQITIPQQRPSGDNYVMSTFRRLEVNGIPEERKVAEALNL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctgcagctgccacggtgttgctcggaacggtagcttacattgtgcatgcccaa
gaagtgacactcagagagtttcatgaaggaaatgtccattcggagcaggccgcggctttg
ctgcaaagacgaaccttgtacaaagacgtcgtcaccatcttgtcaagatcccacgcagac
cgtaatgtctatccatcagctggagtgttgtttgtccacgtgctggagagagagcacttc
aaaggagagtttcctccttaccccaaatcaggtgatgccagcaatgatccgatcaccttc
aacaccaacctgaagggcttccccgacagacccggctggctgcgctacatccagaggact
cctcacggcgacggcgtgctctatggttcccccactgcagagcacgttggcaagcctact
gtgatagagattaccgcctataacagacgcacgtttgagacggcgcggcacaacctggtc
atcaacatcatggcaacagaagaattcccgctgccttaccaggctgagttttacatcaaa
aacatgaacgtggaggagatgctggccagcgaggtgctgggagactttctgggcgccgtg
aagaacgtgtggcagcccgagcggctcaacgctatcaacatcacgtcggcgctggaccgc
ggcggccgggtgcccctgcctatcaacaacctaaaggaaggtgtgtatgtgatggtcggc
gctgacgttcccttctcgtcgtgcctgcgggaggtggagaacccacataaccagctgcgc
tgcagccaggagatggagcctgtcatcagctgtgacaagaaattcagagctcagtttcac
atcgactggtgtaagatctccctggtcgatatcaacaaagtggttccagtgtacgtttcc
cgcccagatccgggcacaggaatcctgcccgagttcggagagtacaaccccccgtcggag
tctctgaggagcccagactacttcttcgacttcctggtgacgctggccgttccgtccgcc
gtggccctcgtcctcttcttcatcctcggctacacaatgtgctgcaggcgggagggggtg
gaaaaaagaaacatgcaaacaccagccatccagctggttcaccacagctccatccagaag
tccaccaaggagctgcgggggatgtccaagaaccgtgagatctcctggcctctgtccacc
ctgcccgtcttcaacccggtcagcggggaggtggtgccccccattcaccccgacaactac
gagaccaccagcatgcccctcatgcagacacaggcgaatctgcagaatcagattacaata
ccacagcagaggccatcaggagataattatgtcatgtcaacatttcgaagactggaggta
aatggtatccctgaggaaaggaaggtggctgaagcccttaacctatga
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