Xiphophorus hellerii (green swordtail): 116731504
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Entry
116731504 CDS
T07363
Symbol
tbc1d5
Name
(RefSeq) TBC1 domain family member 5 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116731504 (tbc1d5)
Membrane trafficking [BR:
xhe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116731504 (tbc1d5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
116731504
NCBI-ProteinID:
XP_032437177
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Position
13:19638142..19662072
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AA seq
883 aa
AA seq
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MQHPNFETRHPLQTDEQQETGFDPLHNFNKNRSRGSLDGSFSSQPQSTFLSYRKEWDDLF
LNSNYLARIRQAGLNGRLRSSRFRSVCWKLYLEVLPEDKGQWIKRTKEHRAQYEKIKEMH
ITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELKGMIKQDVFRTFPEICYFQNEDVR
TKLTDILFCYGRENEQLLYKQGMHELLAPIVFVLHCDHQAFQHASETASPSDEMKCLLDP
AYLEHDAYAMFSQLMETAEPWFSTFEREVRKGKEEMLTSIPFARPQDAGPSVAVVTKVNR
IQDQLVKKHDIELHMHLNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSITLD
LVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDINALLQKALFLRDPKNNPRPVNY
QFQQNLDYYKTRGADLMNKTRSASTAKAAPLNINKVSSSLLSFGRKLIAPAMSGVPSSVA
PINSEVYSSSSSSSYSSSSSFTPPASAPALSHPLAEPSAPPLPQTQVRGQTQNYRLLKSE
SMPVHLGKDEVSGAVSQGSLPEQTLTDTQGQSSRTVSSSPSTESLSGGRGQSSASPPLPP
SRGSDVSCSSPPLSATKKESFFNITRSRSHSKSMGKKEMDEDLEAQVSFLQGQINDLEAM
SKYCAKMMNTHICKIQEVIVQEHLEKEDEVLISLAGLKQIKDILKGALRFNQSQLEAEEN
EEITIADDHYTSTAAATETSLDSARHHGERLQGGDGTQSRDFYLDRGASTDEKDEEEKEE
EEEETATTPPEQQVASSLISERKNWDDYILVSQDGDLPAEGREAEGKLPVRRGRAAVRME
PEGSSGTFHDPLMTGATSGSSSPEEGSTNSKDSDFTIVNPNDL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccccaactttgagacccgccacccgctccagacagacgagcagcaggagacc
ggtttcgacccgcttcacaatttcaacaaaaatcgcagcagaggctctcttgatggcagc
ttctcctcccagcctcagtccaccttcctctcctacagaaaagaatgggacgacttgttc
ctcaacagtaattacctggccaggatccggcaggctggcctcaacggtcggctgaggagt
agtcgcttccggagcgtttgctggaagctgtacctggaggtccttcctgaggacaagggc
cagtggatcaagaggaccaaggagcaccgggctcagtatgagaaaatcaaagaaatgcac
atcactaacccccgtaaagctgcgggccagcaggacctggtcgtcaacaatccgctgtcc
caggatgaggggagtttgtggaacaagttcttccaggataaagagctgaaggggatgatc
aagcaggacgtttttaggacattccctgagatctgttacttccagaacgaggatgtgagg
accaagctgaccgacattctcttctgttatggcagagagaacgagcagctgctctataaa
caggggatgcacgagctgctggcccccatagtgtttgtgctgcactgtgaccatcaagcc
ttccaacacgccagcgagacggccagccccagtgacgagatgaaatgtctgttggatcct
gcgtacctcgaacacgacgcctacgccatgttctcacagctgatggagacggcggagccg
tggttctccaccttcgagagggaagtgaggaagggtaaggaagaaatgctcaccagcatc
cccttcgcccggccccaggacgctggcccgtctgtcgccgtggtgaccaaagtgaaccgc
atccaggaccaactggtgaaaaagcacgacatcgagctccacatgcacctgaaccggctg
gagatcgcgccgcagatctacggcattcggtgggttcgcctgctgttcggccgtgaattt
cccctccaggacctgctggtagtgtgggacgctctgttcgccgacagcatcactctggat
ctggtggactacgtcttcgtggccatgctgctctacatccgagatgctctaatcgcaagc
aacttccagacctgcctgggattactgatgcattaccctcccataggcgacatcaacgct
ttactgcaaaaagctctgttcctccgagatcccaaaaataatccacgcccggtgaactac
cagtttcagcagaacctggattactacaaaacaagaggagccgatctgatgaacaagaca
cggtccgcctctacggcgaaagccgctccgttgaacatcaacaaagtgtccagcagcctg
ctgagcttcggcaggaagctcatcgctccggccatgtcgggcgtgcccagcagcgttgcc
cccatcaacagcgaggtgtactcctcgtcctcctcctcttcatattcctcctcgtcctcc
ttcacgcctcctgcctcggcgcccgctctgtctcacccgctcgctgagccctcggcaccg
ccgctgccgcagacgcaggtccgaggccagacgcagaactaccgcctgctgaagtctgaa
agcatgccggtccacctcggcaaagatgaagtttcaggtgcagtgtctcagggctctctc
ccagaacagactcttactgacacacaaggccaaagctccaggacggtcagctcctccccc
agcacggagagcctttctggtgggcggggccagtcctctgcgtccccgcctctcccgccc
tccagagggagtgatgtcagctgctcgtctcctcccctctcggccaccaagaaggagtcc
ttcttcaacatcacccgctcccggtctcacagcaaaagcatgggcaagaaagagatggac
gaggatctggaagcccaggtgtccttcctgcagggccagattaacgacctggaggccatg
agcaagtactgcgccaagatgatgaatacgcacatctgtaaaatccaggaagtgattgtg
caagagcacctggagaaagaagatgaagtcctcatctctttagctggacttaaacagatc
aaagacatcctgaagggagcgctgcgcttcaaccagagtcagctggaggccgaggagaac
gaggagatcaccatcgccgatgaccactacacctccaccgccgcagcgacggaaacctcc
ctggacagcgcgcgtcaccatggcgaacggcttcagggaggcgacggcacgcagagcaga
gacttctatctggaccggggcgcgagtacggacgagaaggatgaggaggagaaggaggag
gaggaggaggagacggcgacgaccccgcctgagcagcaggtggcgtcgtctctgatctcc
gagagaaagaactgggacgattacatcctggtgtctcaggacggagacctgccagccgaa
gggagggaagccgaaggaaagctgccggtgaggcgagggcgcgccgctgtgcgaatggag
cccgaaggctcatccgggacttttcacgaccctttgatgactggcgccacatcgggctcc
tccagcccggaggagggctccaccaacagcaaggactccgacttcaccatagttaaccct
aacgacctgtga
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