Xiphophorus hellerii (green swordtail): 116731507
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Entry
116731507 CDS
T07363
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116731507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116731507
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xhe04031
]
116731507
Membrane trafficking [BR:
xhe04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
116731507
GTP-binding proteins [BR:
xhe04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
116731507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SRPRB
Motif
Other DBs
NCBI-GeneID:
116731507
NCBI-ProteinID:
XP_032437182
LinkDB
All DBs
Position
13:27756139..27766472
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AA seq
218 aa
AA seq
DB search
MDTLWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDIEPGVKIKL
QLWDTAGQERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHKEVSEHILPHHMVYIL
IGHKSDLNKDRKVSRDEAEQLAADLGIRYIETSAKCNSNVDRAFELLTRDIFELMKMGEI
VTRDGWDGVKSGLTAKVLYPGDDEEELATASPEKGCHC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgtggcaataccagttccgaatcatcctgctgggggactccaccgtgggg
aagtcgtcgctgctgaagcgcttcacggacgggatttacagcgacgtggcggatcccacg
gtcggggtggatttctacgcccgctcgctggacatcgagcccggggtgaaaatcaagctg
cagctctgggacacggccggacaggagcggttcaggtctatcacaacatcatactaccgc
aactctgttgggggacttctagtctttgacctcaccaaccgcaagacctttgaccatgtg
agagaatggcacaaggaggtgagcgagcacatcctgccccaccacatggtctacattctc
atcggccacaagagcgacctcaacaaggaccgcaaggtgagccgggatgaggctgagcag
cttgccgccgatctgggaatccgctacatcgagacgtcggctaagtgcaacagcaatgtg
gaccgggcgttcgagctgctgaccagagatatcttcgagctgatgaagatgggggagatc
gttacccgtgatggctgggatggcgttaaaagtggcctcactgcaaaggtcctctacccg
ggtgatgacgaagaggaacttgcgactgcttcccccgagaagggctgccactgctaa
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