Xiphophorus hellerii (green swordtail): 116731536
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Entry
116731536 CDS
T07363
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
xhe
Xiphophorus hellerii (green swordtail)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
116731536
NCBI-ProteinID:
XP_032437238
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Position
13:complement(6329269..6492073)
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AA seq
1176 aa
AA seq
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MKMAPTGWLWLWRLPLLLTILKLRLCFLSVSASTTSFPKDLEPLHVVSSEQSYQYPGFQG
LLQDNDTLRLGLDFQRMLRINHILYIAARDHVFAVNLTTASEEFVPQLKLTWRSKDVSKC
TVRGKNSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTSLEQVGEEVVGQARCPF
ESIQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGEGRPVLRTVKYDSKWLREPHFLHAI
DYGNYVYFFLSEIAVEYTALGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVP
GDSFFYFDVLQSLTNVLQINQRPAVVGVFTTQSNSIPGSAVCAFYMDDIEKVFNGKFKEQ
RTSDSSWTPVPDEQVPRPRPGTCAGDGPASDYKSSVQFPDEMLTFIKSYPLMDEAVPSVN
DRPCFTRTSSRSKLTQIVVDVSAGPLKDRTVMFLGSDDGRVLKVLASTHPNDSFGSKLLE
DIDVYNPSKCNVQGQEDRRVLGLELDKDHHALFVAFTSCVIRVPLSRCTQHGACKNACLA
SRDPYCIWLRTGTCANMAPGFKAGFEQDIEGDHSFYPDNCHTDVLATTRNQESAADSAYG
VRRPPELDQRASANVHYTLLIACVFVAFFLGAILSGFLVSCYCSRSAAHRAHRLGKDPEA
SLPHALSLRSLAKLNGLLDGQPKDDKLDVSTPKMYSSFIPNGRAEPHLHTPGHQGLQLGD
PDLNLSQSLSQGDGELSGLPTPDSTPELPFRNMKGLRHHQYEKNQNCNNAKDNNPKSGPS
CSKSNQGFMAVVGNSLSQQVFPFSHHNGGGLSNGAAHGAGASSTSLHLLEDRKIPNDERA
ATAATAAAGGGVGGAPHHHHSQQSLPQTVVDVSALDELLKHIHEVSASGTGGIKVLTSTS
SSSLFPGPSSSGGGHQSGHHHHHHHQNQHNHTRTHHYNHSHHHSNHHNNNSSSSSSHHHQ
QQQIPETEPTSYYSTSTLPRDGVPKRLDSAPQNSTSSSATSSSSSSSSNNPTSSTSIPSS
SSSSSSTPLQQQVIPERPGGSDVPVARHQSQRHSLIKMGAAGGAVPRHHSFNQRGTHAHF
LARMNTNNNSSSSNNNRPPGPAAAANTNTSNNNESQRVSVASACLTRQHSYSEGPHAQRA
AIVRRTVSLKPQIPPKPLFLPNTATSAVTEAGKYNY
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggccccgaccggctggctgtggctgtggcggctgccgttgctgctaacgatc
ctcaagcttcgtttgtgttttctgtctgtgtcggcctcaaccacatccttccccaaagac
ctggagccactccatgttgtcagctcggagcagtcgtaccagtatccaggctttcagggt
ctgctgcaggacaacgacacgctgcgcctgggtctggactttcagagaatgttgaggatc
aatcacattctttacattgcagcaagggatcatgtgtttgctgtgaacctcactacggca
tcagaggagtttgttccacagctgaagctgacgtggagatccaaagacgtcagcaagtgt
acagtcaggggaaagaacagcgatgagtgctacaactacgtcaaagttctggtacctcga
aacgatgagactttgtttgcttgtggtactaatgccttcaacccaacctgccggaactac
aagatgacctccttggagcaggttggggaggaagtggtgggtcaggctcgctgtccgttt
gagtccattcagtccaatgttggattgtttgctgggggagatttctattcggccaccatg
acggactttctagcaagcgatgctgttatctacagaagcctgggcgagggccgaccagtt
ctcaggaccgtcaagtatgactccaaatggctccgagagcctcatttcctgcatgccatc
gactatggtaactatgtctactttttcctgagtgagatcgcagtggagtatacagccttg
ggcaaggttgtgttttctcgagtcgcgcgtgtctgtaagaatgataacggaggatcaccc
agagttctggaaagatactggacttccttcctgaaggcccggttgaactgttcggttcca
ggagactccttcttctatttcgatgttcttcagtctctcaccaacgtgctgcagatcaac
cagaggccagcagtcgttggagtgtttaccactcagtccaacagcataccaggctcagca
gtttgtgccttttacatggacgacattgagaaagtcttcaacgggaagttcaaagagcag
agaaccagtgattcatcctggactccagtaccagacgaacaagttcccagaccaagacca
ggtacttgtgcaggcgacggtccggcctcagactacaaatcttcggttcagttcccagat
gagatgttgactttcatcaaatcttatcctctgatggatgaggccgttccctctgtcaac
gaccggccctgcttcacacggacatcgagcaggtccaagttgacccagattgtggtggat
gtttcagccggtccccttaaggacagaacagtcatgttcttgggctcagacgatggccgt
gtcctgaaagttctggctagcacacatcccaatgacagctttggatccaaactcctggag
gacatcgatgtttataacccctccaagtgcaatgttcagggtcaggaggacaggagggtt
ctgggactggagttggacaaggaccatcatgcactgtttgttgcttttaccagctgtgta
atcagagtaccactcagtcgctgcacccaacatggagcctgtaaaaacgcctgcctggcc
tcccgtgacccttactgcatctggcttcgcaccgggacatgcgccaacatggcaccaggc
ttcaaggccgggttcgaacaggatatagagggcgaccactcgttttaccccgacaactgt
cacactgatgtgttggccacaacacgaaaccaggaatcagcagctgactctgcctacggt
gttcgtcgtcctcctgagctggatcagcgtgccagcgccaacgtccactacaccctgctg
atcgcctgcgtgttcgtggcattctttctgggagccatcctatcgggtttcctggtgtct
tgttactgcagccgcagcgcagctcaccgagcccacaggctagggaaggaccccgaagca
tcactgccgcacgctctgtcgctacgatcgctcgccaagctgaacgggcttctggatggg
cagccgaaggatgacaaactggatgtgtccacgccaaaaatgtacagctccttcatccct
aacgggcgggccgagccgcacctccacacccctggacatcagggcctgcagctgggagac
cctgacctcaacctctcacagtctctttctcagggtgatggagaactctctggcttgccg
acgcctgactccaccccagaactccctttcaggaacatgaagggtttgcgacatcatcag
tatgagaagaaccaaaactgcaacaacgccaaggataacaaccccaagtcaggtcccagc
tgctccaaatccaaccagggcttcatggctgtggttgggaattctttgagccagcaagtg
tttcccttttctcaccacaacggtggcggtttgagcaacggggcagcacatggggcaggc
gcctcgtcaacttcactgcacctccttgaggacaggaaaattcccaatgatgagcgagct
gccaccgccgccacagcagctgcaggaggaggagtgggtggagctccacatcaccaccac
tcccagcagtccctaccccagacagtggtggacgtgtctgcactggatgagctgctcaaa
cacatccacgaggtcagcgcatcaggaactggcggaatcaaggtcctcacgtctacctcg
tcgtcctcgctgttccctggaccgtcctcttcaggaggaggacatcaaagtggtcaccat
caccaccatcatcatcaaaatcaacacaaccacactcgaacacatcactacaaccacagc
catcatcacagcaaccatcacaacaacaacagcagcagcagcagcagccaccatcaccag
cagcagcagattccggagacagaaccaacttcctattacagcacctccacactgccgagg
gatggcgtccccaaacgcttggattcagctcctcaaaactccacctcgtcctctgccacg
tcttcgtcttcatcctcctcttcaaacaaccccacctcctccacctccatcccttcttcg
tcctcttcctcttcctccactccgctccaacagcaggtgatcccggagcggcctggaggg
agcgatgtccccgtagcgcgtcaccagtcccagcgccactccctcatcaagatgggtgca
gcaggtggcgctgtgccccgccatcacagcttcaaccaacgggggacacacgcacacttt
ctggccagaatgaatacaaacaacaacagcagtagcagcaacaacaaccgacccccaggt
ccagccgcggcggcaaatacaaacaccagcaacaacaatgagagtcaacgggtgtctgtc
gctagtgcctgtcttacacggcaacacagttacagcgaagggccgcatgcgcagcgggcg
gcaatagtccgaagaacggtgtccctgaagccacagatcccaccaaaaccgctttttctg
ccaaatacagcaacgtctgcagtaacggaggcaggaaagtacaactactaa
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