Xiphophorus hellerii (green swordtail): 116731564
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Entry
116731564 CDS
T07363
Name
(RefSeq) plectin-like
KO
K28085
epiplakin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
116731564
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Gene cluster
GFIT
Motif
Pfam:
Plectin
PAC1
Motif
Other DBs
NCBI-GeneID:
116731564
NCBI-ProteinID:
XP_032437278
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Position
13:complement(<5..26446)
Genome browser
AA seq
1460 aa
AA seq
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MVSISQNTAMKKNGNEVHEPVAGIFLEKTGEKFTIYQAMKKRLLKPGTALALLEAQAATV
GIIDPIGNRILPVADAVKEGVVGPEMREKLLTAEKAISGYIDPYTNQIISVYQAMQKDLV
PREYGLRLLEAQIASKGIYDPVEKTSISTDAAIQKGLYEKALLSDQMSELKVFYNPSTQE
YLNYQNLLETCTVEPETGLLLLPVCIAFKGLRKGISSSELLESKIIDKETYEDLQKGKTT
TQDVMLMETVKEYLEGKGSIAGIADLSTNQRISIYQAMKQGIVMPGTALVLLEAQAATGF
MIDPVGNKKYTVDEAIKHKLIGPECHLKLLSAERAVTGYKDPYSGETISLFQAMSKDLIV
KEHGIRLLEAQIATGGIIDPINSHRLPTQVAFKRGYFDEEMNKILEDEGDDTKGFFDPNT
EENLTYLQLIERCVTDPGTGLCLLPLHDKSGKFNSSFIDYKTKTVFKTEKVKVTCGKYIG
MTVSLWELLMSEYFNEHQRQDIFQKYKEGKLNISTIIKMILETIETSVKATKTVFEGIRE
TVTAKQLVEAEIISEKVMKELEDGKKSIKDVIEDENVNVYLQGKDSIAGILLPDSQVITI
YQARQKGKLMPGTGLILLEAQAATGFIIDPIGNRKFSVDDAVKAKIVGPDVCQKLRSAER
AVTGYKDPHDGKIISLFQAMQKDLILKDHGIRLLEAQIATGGIIDPVNSHRIPVHVAYKR
GYFHEEMNQILSDPSDDTKGFFDPNTHENLTYLQLLARCVKDPSTGLCLLPLKSKSTKIN
IDDNMREIFHRTIITVKYGRFKGSTTLWEAINSEYLSEDKRQDLFKLFRSRKITVEQLTV
TIIDIIESKEIKQQAELNFEGLRGEVSVVDLLDLEIVDEKTYKSMIDGKLSSTDVMKMDR
IRAYLQGTSCVAGLILQPSNQKLSINEAQKMGILTPGTALCLLEAQAATGFIVDPLKNQK
FTVEEALREKVIGPQVYEKLLSAERAVTGYKDPYTGQKISLFQAMKKDLIVKQHGIRLLE
AQIATGGIIDPLKCLHLPLEVAYRKGYFDAELNQILTDPTDDTKGFFDPKTQENLTYMEM
LSRCVKDKDTGLLLLPLNGTPKTSAKTDKTYTEAEIRQEFEKTFVSVSVGRYSGKSVSLW
DLIHSCYFTEDQQLEFIEKVRTKQMNTQTIITVVISTIEKLERETPKVTMGLRKEVSAQQ
LLDSDIIDSATFTQVKEGKLDFEEVSKSEFVTRYLRGTASIAGIKIYPTQDVMSIYEAKQ
KNLLTPGIALVLLKAQSATGWVIDPVSNKFYSVDEGAKEMVIGTDVLEQLLSAQRAVTGF
KDPYTDGTISLFEAMKERLVERSEGLHLLEAQMATGGVIDPNQSHRVPAQVAIKKGFLDE
ETYNFLQNPSDDARGYFDPNTNENLSYVQLMSRCERDSKTGLLLLPLDVDESKEFHTDEQ
VELAFKNKSISLTVGKFKNN
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccatcagtcagaacactgccatgaagaaaaatggaaatgaagtccatgaacct
gtggcaggcatatttctggagaagacaggggagaaattcaccatttatcaggccatgaaa
aaacgtctgcttaaaccgggaacggcattagctctacttgaagcacaagcagccactgtg
ggcatcatagatccgataggaaaccgtatacttcctgttgcagacgctgttaaagaagga
gtagttggtccagaaatgagggagaaacttctcactgcagagaaagccattagtgggtac
atagacccctacaccaatcaaattatatctgtgtaccaggctatgcaaaaagatttagtc
cccagagagtatggcttgaggttactggaagcacagatagccagcaaaggcatctatgac
cctgtggagaagaccagcatctctactgatgccgcgatccaaaagggcctttatgaaaag
gctttgcttagtgaccaaatgtctgagctgaaggtattttacaatccaagcacacaagaa
tatcttaactaccaaaaccttctggaaacatgcactgtggagccagaaaccggcttgttg
ctccttcctgtctgtattgccttcaaaggtctgcgcaaaggcatttcctccagtgaactg
ttggagtcaaagatcattgacaaagaaacatatgaagacttgcaaaaggggaagaccaca
acccaggatgtgatgttgatggaaaccgtgaaagaatacctggaaggcaaaggcagcata
gcaggcattgctgatctctcaaccaatcagagaataagcatttatcaagccatgaagcaa
gggatagtgatgccaggcacggcacttgttctgctggaagcacaagcagcaactgggttc
atgattgaccctgtaggaaacaagaaatacacagtggacgaagctattaagcacaaactt
attggcccagaatgtcatttgaagctgctttcagctgagcgagcagtgactggatacaaa
gatccttattcaggagagaccatatccctatttcaagcaatgtcaaaggatctcatcgtt
aaggaacatgggatccggctactggaggcacaaattgccactggtggaataattgatcca
atcaacagccacagacttcccactcaagtggcctttaagagaggctattttgatgaagaa
atgaataagatactggaagatgaaggcgatgacacaaaaggattttttgacccaaataca
gaagaaaaccttacataccttcagctgattgaaaggtgtgtcaccgatcctggcactgga
ttgtgccttcttcctctacatgacaaatcaggcaaatttaattctagctttattgactac
aaaacaaaaactgtcttcaaaactgaaaaagtcaaagtgacatgtgggaagtacatagga
atgacagtctctttgtgggaactactgatgtcagagtacttcaatgaacaccagaggcaa
gacatatttcagaaatacaaggaagggaagttaaatatctctacaatcattaagatgatt
ttggagaccatagaaacatcagtaaaagcaacaaaaaccgtctttgagggtatacgggaa
actgtcacagccaagcagcttgttgaagcagaaatcatcagtgagaaagtgatgaaggag
ttggaagatggaaaaaagtcaataaaggacgtaatagaggatgaaaatgtaaatgtttac
ttacagggaaaagacagcatcgcaggtattctgcttccagattcccaagttataacaatc
taccaagccagacaaaaaggaaagctgatgccaggaactggcctgattctgctggaggca
caagcagctactgggttcattattgaccccattggaaacaggaagttttcagtggatgat
gctgtcaaagctaaaattgtgggacctgatgtctgtcagaagctgcgttcagcagagaga
gcagtcactgggtataaagatccacatgatggaaaaataatctctctgttccaagctatg
caaaaagacctgatcctgaaagatcatgggattcgacttctggaggcacagattgccact
ggtggtatcattgatccggtgaacagccaccgcatccctgtacatgtagcctataagagg
ggatacttccatgaggagatgaatcagattttgagcgatccaagtgacgacaccaaaggt
ttctttgaccccaatacccatgagaacctgacatacttgcagctcctggctagatgtgtc
aaagatcccagtactggtctgtgcctcttacctctgaaaagcaagagcaccaaaataaat
attgatgacaacatgagggaaattttccataggacaataattactgtcaagtatggcaga
ttcaagggcagcacaactctgtgggaagcaattaattcagaatatctgtctgaagacaaa
cgacaggaccttttcaaacttttcaggtcccggaaaatcactgttgagcaactgacagtg
accattatagatatcattgagagcaaggagataaaacagcaagcagagctgaactttgaa
ggtctcaggggagaggtgtctgttgtggatctcttggatcttgaaattgtagatgaaaaa
acatacaaaagtatgattgatggaaagctttcaagtactgatgtaatgaagatggacaga
ataagagcctacctccaagggacaagctgtgtagcaggattgatactacaaccctccaat
cagaaactaagcatcaatgaggcacagaaaatgggcatcctcactccaggcactgccctt
tgtctccttgaagcacaggcggccacaggattcattgtagatcctctaaaaaaccaaaag
tttacagtggaagaagcactaagagaaaaggtcattggtccacaagtgtacgaaaagctg
ttgtctgcagagagggccgtcactggttacaaagacccatacacaggtcaaaagatctct
ctattccaagccatgaaaaaggatcttattgtcaagcagcatggtattcgtttactcgag
gcccaaattgctactggtggtatcattgatccattgaaatgccttcatttacctctagag
gttgcatacaggaaaggttattttgatgcagaactcaatcaaatcttaacagaccccact
gatgacacaaagggcttctttgacccaaagactcaagaaaatctgacatatatggaaatg
ttgagcagatgtgtgaaagataaagacactggactccttcttctgccacttaatggcaca
ccaaagacatcagcaaaaacagacaagacatacacagaagcagaaataaggcaagagttt
gaaaagacatttgtaagcgtaagtgtgggacggtattcgggaaaatctgtttctctctgg
gacttgattcactcttgttacttcactgaagatcagcagctagaatttattgaaaaagta
agaacaaagcagatgaacacccaaacaataatcacagtagtgatttccacaattgaaaaa
ctggaaagggaaacccccaaagtgacaatggggctgagaaaggaagtatctgcacaacaa
ctcttagattctgatattattgactcagccacattcacacaggttaaagaaggaaagcta
gactttgaagaagtaagcaaaagtgaatttgtgacaagatatcttcggggaactgcaagc
attgctggtatcaaaatttatccaacccaggatgtaatgagcatttatgaggcaaaacag
aaaaatcttttgactcccggcattgcacttgtactgcttaaagcacagtctgcaacagga
tgggtgattgatcctgtcagcaataagttctattcagttgatgagggtgcaaaggagatg
gtaattggaacagatgtccttgagcaacttctttcagcacagcgtgctgtcactggcttt
aaggatccttacacagacggcaccatatccctgtttgaagcgatgaaagaaagactagtt
gaaagaagtgaaggccttcatcttcttgaagcacagatggcaactggaggagttatcgac
ccaaatcaaagtcacagagtacctgctcaagttgctattaaaaaaggattccttgatgaa
gaaacttacaatttcctgcaaaacccaagtgatgatgcaaggggttactttgacccaaat
accaatgaaaatttatcctacgttcaactgatgagtcgatgtgaaagagattccaaaact
ggactccttctcctgccattggatgttgatgagtccaaggagtttcatacagatgagcag
gtggagcttgccttcaaaaacaaaagtatttccctgactgtaggaaaatttaagaacaac
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