Xiphophorus hellerii (green swordtail): 116731698
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Entry
116731698 CDS
T07363
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116731698
04121 Ubiquitin system [BR:
xhe04121
]
116731698
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116731698
Membrane trafficking [BR:
xhe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116731698
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116731698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
Zn_ribbon_19
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
HypA
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
116731698
NCBI-ProteinID:
XP_032437402
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All DBs
Position
13:11801070..11809074
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AA seq
289 aa
AA seq
DB search
MAEAADTPQHRFYCHFCKKQTEPQLPDLVCPTCESDFIEEVTEDSSFLQDSAPSVTNAES
NLQLPDIWQLVFMERSALLSHPPSSESRPEDHQQVSPASPVVTELQEQDLPFNAEQDESS
RPEQIPAVPGLMLQVLSDLLATSGNSSSTPTVLSSMMQLYSNPGDYVWGQGGLDSVVTEL
LEQLESTGPPPAKEEMISLLPRVCVSQEQIDCRLECPVCREEYSLAESVRKLPCLHYFHS
GCIVPWLELHDTCPVCRKSLDGVDNNLPPTSQPQDELSDRQEQQEREAI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggacacaccacaacaccggttttactgccacttctgcaagaaacag
acggagccccaactgccggatttggtctgccccacatgtgagtccgacttcatcgaggag
gtaacagaagactccagtttcctgcaggatagtgcgccgtcagtaacaaatgcagagtca
aacttgcagttgccagacatatggcagctggtgttcatggagcgctccgccctgctgtcc
cacccgccctcctccgagtcccgtccagaggaccaccagcaggtatctccagcgtccccg
gtcgttacagagttgcaggaacaggacttgccttttaatgctgagcaggacgagtcttcc
aggcctgagcaaattcccgctgtacccgggctcatgctgcaggtcttgtctgacctgtta
gccaccagcggaaactcttcttctactccaaccgtactatcaagcatgatgcagctgtac
tcaaacccgggagattatgtgtggggacagggaggcctcgactcggtcgtcacagagtta
ttagagcagctggagagcacgggtccaccgccggctaaagaggagatgatctcattgctg
cccagagtttgcgtctctcaagaacagatagactgtcgactagaatgtccagtttgtagg
gaggagtattcgcttgccgaatctgtcaggaagcttccctgcctccattacttccacagt
ggctgcatagtaccttggttggaactgcatgacacctgcccagtgtgccgcaaaagtctc
gatggcgtcgacaacaacctcccgcccacgtcgcagccccaagacgagctctctgacagg
caagagcaacaagagagggaggcgatttga
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