Xiphophorus hellerii (green swordtail): 116731717
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Entry
116731717 CDS
T07363
Symbol
rprd1a
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116731717 (rprd1a)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116731717 (rprd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
Takusan
Motif
Other DBs
NCBI-GeneID:
116731717
NCBI-ProteinID:
XP_032437435
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All DBs
Position
13:complement(16996448..17002776)
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AA seq
294 aa
AA seq
DB search
MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSKTIVTVWFTELKKAQVSRKLTFL
YLANDVIQNSKRKGPEFTQDFAPVIVEAFKHVNREGEEGCKKQLGRVLSIWQERAVYENN
LLEQLSEVLYGEKKPKKRSYEEIHPDDEGFASRSSPADPPQTADLIRALQELENAASSDS
VLRQRISSLPAEVQDTSLLHRITDKESGERLSRMVEEACMLLADYSGRLAAEIDDRRQLT
RTLTTFLQSQKDGLTQNEQKLEEYKRKLTMVSQVRKELRSRLSNLSEGHRNSSK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttctccgaggcggcattagagaaaaaactatccgagcttagcaactctcag
caaagtgtgcaaacgctgtcgctgtggctcatccaccacagaaaacactcgaagactatt
gtcacggtgtggttcaccgaactgaagaaagctcaggtatcgcgcaagctgaccttcctc
tacttggccaacgacgtcattcagaacagcaagagaaaaggaccggagttcactcaggac
tttgcgccggtcatcgttgaagcattcaaacatgtcaacagggaaggcgaggagggctgc
aagaaacagctagggcgggttttatccatctggcaggagagagcggtgtatgagaacaac
ctgctggagcagctctcagaggtcctctatggagaaaagaaaccgaagaaaagatcttat
gaggagatccaccctgatgatgagggcttcgcctcccgtagctccccagctgatcctcca
cagacagcagatttaattcgagccctgcaggaactcgaaaacgccgcctccagcgactcg
gtgctgcggcagcgcatctcctctcttcctgccgaggtccaggacacgtccctccttcac
aggatcacagacaaagagtcgggcgagcggctctcccggatggtcgaggaagcctgcatg
cttttagccgactacagcggtcgcttggccgcggagattgacgacaggaggcagctcaca
cgtacgctaacgaccttcctgcagagccagaaggacggcttgacccagaacgagcagaaa
ctcgaagaatacaagaggaaactgacgatggtgtcgcaggtccggaaagaactgcggtcg
cgcctcagtaacctttcagaaggacatcgcaactcttccaaatga
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