Xiphophorus hellerii (green swordtail): 116731778
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Entry
116731778 CDS
T07363
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116731778 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116731778 (vps45)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116731778 (vps45)
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Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
116731778
NCBI-ProteinID:
XP_032437507
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Position
13:complement(6933260..6946920)
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AA seq
582 aa
AA seq
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MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQSR
DSMKHLKAICFLRPTKENVQHLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLQGVSRRCTDQVLSGRNRFPGRTWEPSMLSRCTQGLTSVL
LALKKCPMIRYQLSSDMAKRLAESVKQIITKEYELFDFRKTEVPPLLLVLDRSDDAITPL
LNQWTYQAMVHELLGLNNNRIDLSRVPGISKDLREVVLSAENDEFYANNLYLNFGEIGTN
IKNLMEDFQKKKPKDQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVAERQ
LMEVSEVEQELACQNDHSNAQQNVRRLLQNPRVSELDAIRLVMLYALRYERHSSSILPSL
MEELSRKGVSERYRRMVQSVVEYGGKRIRGSDLITPTDAVAITKQFFKGLKGVENVYTQH
QPLLHDTLDQLIKGRLKDSQFPYLGPSSLRDRPQDIMVFLIGGATYEEALTVYNLNRNTP
GVRIVLGGSAIHNTKSFLEEVILATGHSGDRAQGSGRHSARR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacgctcgcggtgaagcagtacatctccaaaatgatcgagaacagcgggccc
gggatgaaggttctgctcatggataaggagacgaccagcatagtgagtgtggtttacacc
cagtctgaaatcctgcagaaggaggtttacctgttcgaacggatcgactctcagagcaga
gacagcatgaagcacctgaaggccatctgcttccttcgtccaaccaaggagaacgtgcag
catctaatccaggagctaagaagaccaaagtacagcgtttacttcatctacttcagtaat
gtgatcagtaagagtgagatcaaagctctggctgaggcagatgaacaggaagtggtggct
gaagtccaggagttttatggagatttcatcgctgtgaatcctcacctgttttctctcaac
ctgcagggagtttcccggagatgcaccgatcaggttttatctggccgaaaccgtttcccg
ggtcggacctgggaaccctccatgttgtcgcgctgcacgcagggtttgacctccgtcctg
ctcgctctgaagaaatgtccaatgatccgctaccagctgtcctctgacatggccaaacgc
ctcgcagaaagcgtcaagcaaatcatcacgaaggaatacgagctgtttgacttcaggaag
actgaagttcctcctctgctgctggtcctcgaccgcagcgacgacgccatcacaccgctg
ctcaaccagtggacgtaccaggcgatggtccacgagctgctgggtctgaacaacaaccgg
atcgacctgtccagagtcccggggatcagcaaagacctgagggaagtggtgctgtctgcc
gagaacgacgagttttatgccaacaacttgtacctgaatttcggggagatcggcaccaac
ataaagaacctgatggaagatttccagaaaaagaaacccaaagaccaacagaagctggag
tccatttctgacatgaaggcgtttgtggacaactaccctcagtttaagaagatgtcggga
accgtgtcgaagcacgtcacagtggtgggggagctgtcccggctggtggctgagcggcag
ctgatggaggtgtcggaggtggagcaggagctggcctgtcagaatgaccactctaacgct
cagcagaatgttcggcggctgctgcagaatcctcgggtctcggagctggacgccatccgt
ctcgtcatgctctacgctttgaggtatgagcgccacagcagcagcatcctcccgtcgctg
atggaggagctgagcaggaagggagtttctgaacgctaccgcaggatggttcagtcggtt
gtggagtacggtgggaagagaatcagagggagtgacctcatcacaccgacggatgctgtc
gccatcaccaaacaattcttcaaaggactaaagggcgtagagaacgtgtatacacagcat
cagcctctgctgcacgacactctggatcagctgattaaaggtcgactcaaagacagtcag
ttcccgtacctgggacccagcagcctgagagacaggcctcaggacattatggtgttcctg
atcggtggagcgacgtatgaagaagctttgactgtttacaacctgaatcgtaacactccg
ggggttcggattgtgctgggaggaagcgccatccacaacactaagagtttccttgaagag
gtgatcctggcgacgggtcacagcggcgacagagcacagggaagtggacgccactccgcc
aggcgatga
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