Xiphophorus hellerii (green swordtail): 116731811
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Entry
116731811 CDS
T07363
Symbol
atxn1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116731811 (atxn1)
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GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
116731811
NCBI-ProteinID:
XP_032437551
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Position
13:complement(15433991..15538204)
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AA seq
800 aa
AA seq
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MKSNQERSNECLPPKKRGTSSTLPPESRSPAIPPVHDRPENTACYVSAAGGNESNITAHH
SSNKTDGPQYKSPSTLSDSSTSSSSLRLVSSLPTVYTSPLSQSTIGGTVHYTQLPPNMQF
IASSYTTPYTSYISPQILPHPLPPSPLSSSSATQRPSYTESSPSQTLVTKQEQHRASSGR
TSMPPPSTDPFPHHIQMSTSPRTVSSPHHQGGTHLLSQSMHHHQSLGKYTDGYSRKEEGT
RPRELHNGELERGRRFGPPPEPCLLKSGGKSREDRSSLSSFEARHLVLPSDYSTHDHLGL
RTSVMLIPNSHGDHQLVPPRASPEKLTASTPTHLEKGSMGKPVSRPPSSSNTTCSFTFPP
PLSADSLKAAVSTLPPQTVIQTTHNASEPLSMGLPSTSIYPQQPLIGYITGPSGSSYHTG
LQQHLLIPGTQPVIIPVSGGGVPTLEPVTSHITSSTQAAPFPATLPHTYIAATAPKGETV
ETQSGTFHVAAPGAVVQAQLHLPIVPAPPGLVAASTPPAHSSTVVSPSLPPYFIKGSIIQ
LADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIEGSHTSPNFAVVQFSVGEHRTQV
SVEVLLEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSVGDVCISLTLKNLKNGSLKKTQS
PEPENNASVPHSSHGHLKPPRAISEASQSCSVGNSRHRERENGISQRGSGDSGSGSGGDS
RVENGDLTFGERGSVSKDQVARSTDPSSSKPSGSRKRRWSAPEGRKVEKSEEEPPLTLPK
PSFIPYDVKVSIEGRSNIGK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggaacgcagcaatgaatgtctgccccccaaaaagaggggcacatca
agtacattaccacctgaaagtcgctctccggctataccacctgttcatgacaggccagag
aacacagcctgctatgttagtgcagctggtggaaatgaaagcaatattactgcacatcat
agctccaacaaaactgatgggccccagtataaatccccctccaccttatcagactcttcc
acctcctcttcctctttgaggctagtatcatctctccccacagtgtacacatccccccta
tctcaatctacaattggaggaacagtccattatacacaactgcctcccaatatgcagttc
atcgcttcatcgtacactactccatatacaagctacatttctcctcagatactcccacac
cctctccccccttcccctctctcctcctcttcagccacacagagaccatcgtacacagag
tcgtcaccttctcagacgctggtcaccaaacaggagcagcatcgagcgtcctcgggacgt
acctccatgcctcctccttctacggacccttttccccatcatattcaaatgtcaacgtca
ccaaggactgtgtcatcacctcatcaccaaggaggcactcacctactgtcccagtccatg
catcaccaccaatcattggggaaatatacagatggctatagcagaaaggaggaaggaacc
agacccagagagctccataatggggagctagaaaggggtaggagatttggacccccacca
gagccttgcctcttaaagtcaggaggtaaatcaagggaggacaggtcctccttgtcttcc
tttgaggctcgtcatctggttttgccgtcagactactctactcatgatcacctagggtta
agaacctctgtcatgttaatacctaatagccatggggaccaccagttggtaccacccaga
gccagccctgagaaactgacagcttctacgcccacacacctggagaaaggcagcatgggt
aagcctgtcagtcgcccaccctcatcatccaacaccacctgctctttcacatttccacct
ccactaagcgcagatagtctgaaagcggctgtcagcacactgccgccccagactgttatc
cagaccacccacaatgcttcagagccactgtcaatgggactcccttcgacaagcatctac
ccacagcaacctcttattggttacattacagggcccagtgggagcagctaccacactggc
ctacagcaacacttgctcattccaggcacccaaccagtcatcatccctgttagcggaggt
ggggtccccacactagagcctgtaacctcccacattacttcatcaactcaagctgcacct
tttcctgctacactccctcacacatatatcgctgccactgccccaaaaggagaaactgtg
gaaacccaaagtggcacgttccacgtggctgctccaggtgcagtggttcaagcccagctt
catctccccattgttcctgctccaccagggctagttgcagcttccactcctccagctcat
tcaagtacagtggtgtccccctcactcccgccatattttatcaagggttccatcatccag
ctggcagacggcgagctgaaacgtgtggaggacctaaagacagaggacttcatccagagt
gcagagattagcagtgagttgaagatcgattcatccacagtggagcgtatagaagggagc
cacacctcacctaactttgctgttgttcagttctctgttggtgagcatcgcacacaggtg
agtgtggaggtgttgcttgagtaccccttcttcgtgtttggccaaggatggtcttcatgt
tgtccagaccgaaccactcagcttctggagctgccttgtacaaagctttctgtgggtgat
gtttgtatttcacttactctcaaaaacctgaagaacgggtctctgaagaagacacaatct
ccagaaccagaaaacaatgcttcagtccctcactctagccacgggcaccttaaacccccc
agagccatctcagaagcatcccagagctgcagtgtgggaaattccagacacagagagcgc
gagaacgggatcagccagcgggggagcggtgatagcgggagtgggagtggaggagactcc
agagtggaaaatggagatctcacatttggggaaagaggatctgtttccaaagatcaggtt
gccaggagcacagaccccagctccagtaagccgtcgggcagcagaaagcggaggtggtct
gcccctgagggtcgaaaagtagaaaaatcagaagaggagccccctttgaccttgcccaaa
ccttccttcattccttacgacgtgaaagtcagcattgagggaaggtcaaatattggcaag
taa
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