Xiphophorus hellerii (green swordtail): 116731836
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Entry
116731836 CDS
T07363
Symbol
irx1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116731836 (irx1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116731836 (irx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
116731836
NCBI-ProteinID:
XP_032437585
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Position
13:23763905..23768525
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AA seq
442 aa
AA seq
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MSFPQLGFPQFLSASHEVYGSERPASAARDGSTEGAVSSSATAAAVGSMLGMYGSPWAAP
NYSAFLPYSGAADLALISQMSSQYELKDGPGSHPAASLPVHPAQGFYPYGQYPYGDPSRA
KTATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKV
TWGRSAEDRDGRIFSSDNEDEHGKTGSDDEEEEEEIDLETVDVERPEEQRAGEPGSGKGQ
GEAGLSVREQASTESGRTLSTEAGDKLAAERSPSIPECQRAPQSKPKIWSLAETATAPDS
GSHKTAPPAAFAQQAALASAGHPALLPGHGIYTCQIGKLHNWANAALINANSILNMRSLL
GGAPPGHLPLHGAAPAPAATAAGAGTSDSEDDSDVESSGSFSPKRDDEDSERRPDSLKSP
FQLITDRPHHGTTPQRVLTTTL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggttcccccagttcctcagcgcctcacatgaggtgtacggg
agcgagcggccggcctcggccgcccgggacggaagcacggagggcgcagtgagctcctcg
gctacggccgcggctgtcggctctatgctggggatgtacggaagcccgtgggcggctccg
aactacagtgcctttctgccgtacagcggagcggcggacctcgccctcatatcccagatg
agctcccagtacgaactgaaggacggcccgggctcccacccagcggcctcgctgcccgtc
caccccgctcagggcttctacccgtacggccagtacccttacggggacccgtcccgggcc
aagacggccaccagggagaccaccagcaccctgaaggcctggctgcaggagcaccagaag
aacccgtaccccaccaagggggagaagatcatgctggccatcatcaccaggatgacgctc
acacaggtctccacgtggttcgcgaacgctcgcaggcgcctgaagaaggagaacaaggtg
acctggggccgcagcgcggaggaccgggacggccgcatcttcagcagcgacaacgaggac
gagcacggcaagaccggcagcgacgacgaggaggaagaagaggagatcgatttggaaact
gtcgacgtcgagaggccggaggagcagcgcgctggggagcccggctccgggaagggacag
ggggaagcgggcctctccgtcagggagcaggcctccacggagagcgggaggacgctgtcg
acggaggccggggacaagctcgcggcggagcggtcgccgagcataccggagtgccagaga
gcgccgcagagcaaaccgaaaatctggtctttggcggagaccgccacggcccccgacagc
ggctcgcacaaaactgctccccccgcggccttcgcgcaacaggcggctttggcttccgcc
ggccacccggccttgctgccgggtcacggaatatacacttgtcagatcggcaagctgcac
aactgggccaacgcggctctgattaacgccaactctattctgaacatgcggtcgctgctg
ggcggcgcgccgcccggacacctgccgctgcacggagcggcgccggcgcccgcagccacg
gcggccggcgccgggacgtcggactcggaggatgacagcgacgtggagtcatcgggaagc
ttcagcccaaaaagagatgatgaggacagcgagcgcagacccgattccctgaagtctccc
tttcagctcatcactgacagacctcaccacggaacgacgccacagcgagttctgacgacg
acgttatga
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