Xiphophorus hellerii (green swordtail): 116731886
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Entry
116731886 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116731886
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Other basic domains
RF-X
116731886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
116731886
NCBI-ProteinID:
XP_032437675
LinkDB
All DBs
Position
2:7029395..7045066
Genome browser
AA seq
1459 aa
AA seq
DB search
MADDQQQPGQKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDSILQDVEKF
TDIEKLYLYLKLPSGPSSGNDKRTGNERGSSTAGLCDQSSMSSSRTQQMYAFNWIRNHLE
EHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYS
GLRKKAFVHMPSLPNLDLQKSGDGCELMESTGQSPSAEDEMRSAACGLVCEWAQKVLSRQ
FDSVEDLARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTAEANSFQPQVKTL
ASPSVDAKQQLQRKIQKKQQEQKLHSPLPSETQVKRTEASTPGPTIPCGSPALLSPQPTI
GIVVAAVPSPVPVQRNRQLMTSPSPVGTAEGKVLPVNFQVVTQSLKQSPKTPQNVPASPV
GDRLARHGTRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMPSPHVSSVNVVKMTAIA
LAPSSSSNSSVRPASAGVSVAAALDDSQLSQSGNSAAPQSPAVKPAVTLTPTLSADAKGL
SDAGSDNNSLSGTEKHVGGAKEEKMVKFRAASEPSFLVKCSPGPEKGLRTKSDSASPPSS
ASGTQDSNNSNCHDSTLYLTVDNQNFNGNTPSNGSSAVTLTSKDACLDAKSPRKRAAGES
HVIPVKRVFISQQPVAVIDNPKPGLNTAMKRIPRPGTPARPESAPCKGIAKHTALGPTQI
LALTDAPLTHTEGTQTAAKQQDSKHEDHSIAVDPSAGPAGSNASDHTLLQQITGDPRAVT
ANSGPHEASVSDLKSTIWEPQQIPAEHKQAPTDQLSMMAQPSDASGQLTLTQMVDFASSQ
PNMDYFSFNDDDMTQDSIVEELVQMEEQMKLKGLFGNCVDVSGLQGQSAGGQGSILAAHQ
TSSTFYHSTHSSTTPVQTPXPTPTPTPTPTPTSEMTLAHSLTRESPCSRMAPVTPIDGAM
GRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYHDASIVSSSPVKPMQRPMAT
HPDKAKLEWINNRYNSNSAGPLSNHSIGILPSYQDLVDDQFRKPHAFAIPGQSFQSQASQ
DSAHFGRITPISPVQQQQASGVTTPTKQESFAVPAPLDNKASASTASNTFRCRSVSPAVR
QRNFSGNTNPPATTTSTTTTTQAVVSPFNSPITSEVLSILSNSQTVSSVHSMVQRSQSVP
LNIMMQSEMLPVQGQSNTAKITSVLLSKMEADGDDSVRGLGINNLPSNYTARMNLTQILE
TAPSFSGGTASQNQLPVNSSPAAFELQQHGYLTAGDTQAQAGPSEQDQHQQQQQLREDPA
QTQPQLLLQSTQQQQQQEAEDEQQQLDFNNTVKDLLGEDGLNPSSQLVGQVASELNAVAS
DFSNDIRLTSDLSSSITDLNTLDANLLFDPNQQQEQYEDSTLEELKNDPLFQQICSDTVN
SGFEWLESKDQPTTVEMLG
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaacctggtcagaagcctgcctcgggattaggctctcttcca
gcgctggtgccaggactccaagggcccgaggccaacgcgttgcagttcaaaataaagaat
tcaatttgcaaatctgtacaatcaaaagtggacagcatattgcaagatgttgagaagttt
acagacatcgaaaagctctacctctaccttaagttgccttctggtcccagcagtggcaat
gataaaaggactgggaatgagagggggtcctctactgctggattatgtgatcagagttcc
atgtcgtcgagccgtactcaacagatgtatgcattcaactggatacgcaatcacctagaa
gagcacccggagacgtccctccccaagcaagaggtgtacgacgaatacaagagctattgt
gacaatcttggctacaatccactgagtgcagcagactttgggaagatcatgaagaatgtc
tttcccaacatgaaggcccgtcgtctgggcatgaggggaaaatccaaatactgctacagc
gggttaagaaagaaagcttttgttcacatgccatccctacccaacctggatctgcagaaa
tctggtgacgggtgtgagctgatggagtcaacaggtcagtctcccagcgccgaggatgag
atgagatccgcggcctgtgggctggtgtgtgagtgggctcagaaggtgctgagccgtcag
tttgacagcgtggaggacctggctcgcttcctgctcaacagtcactacattggtacaaag
tccatggctgctctcactgttatgactggaacacccacaggaatgaagaccccaactcca
gcctctgcatttgttcccactgctgaggcaaactctttccagccccaagtgaagaccctg
gcatcgccctctgttgacgcaaagcagcaactgcagcgcaaaatccagaagaagcagcaa
gagcagaagcttcactcaccactgcccagtgagacgcaggtgaagcggacagaggccagt
acgcccggacccaccatcccctgtggcagtcctgctctgctgtcccctcagccaaccata
ggaatcgtagtagcagccgtccccagcccagtcccggtacagagaaacaggcagttgatg
acctcaccgagccctgtggggacagcggaaggaaaagtgttgcctgtaaacttccaggtt
gtcactcagtctctcaaacagtctcccaagacaccccagaatgtcccagcaagtcccgtg
ggagacagactggcacgacatggcacgcggtatgcccaaatccttcccaagccctctgcc
acgagtgccataaccctgcgctccccacccacgctgctcatcaccaacagccccataaag
accgtgatgccctctccccacgtcagctctgtcaacgtggtgaagatgacggctattgct
ctggcccccagcagcagcagtaacagcagtgtgcgaccagcctctgctggtgtgagcgtc
gcagctgctttggacgattcccagctgtcccagagtgggaattcggcagctccccagtct
cctgcagtcaaacctgctgtaacattgaccccaaccctctctgcggacgccaaagggttg
tcggacgctggaagtgacaataattccttgtctgggacagagaaacatgtaggaggagcc
aaagaggagaaaatggtaaaattcagagctgcaagtgagccaagctttttggttaaatgt
tccccaggaccagagaaagggttgcggacaaagagtgactccgcctcccctcccagctct
gcatctgggactcaggacagcaataacagtaactgccatgacagtactttgtacttgact
gttgataatcagaacttcaatggcaacacgccgtccaacggctcgtccgctgttactctc
acatctaaggatgcctgcctagatgccaagagccccaggaagcgtgcagctggggaatcc
cacgttattcctgtcaagagggtgtttatctcccagcaaccggttgctgtcattgacaat
cccaaacctgggttgaacactgcaatgaagagaattcccagaccaggaacccctgcgaga
ccagagagtgccccctgcaaagggattgccaaacacacggcgttggggcccacacagatc
cttgcacttacagacgcacctctcacgcacaccgagggaacgcagactgccgcaaaacag
caagattcaaaacacgaggaccattccatcgctgtggatccctctgctggaccagcagga
agcaacgcgtccgaccacacgctactgcagcagatcaccggagaccctcgtgccgttacg
gccaactcaggaccacacgaagcctctgtgagcgatttaaagagcacaatatgggagcct
cagcagataccagcagaacacaaacaggctcccactgaccagctctccatgatggctcaa
ccgtccgatgcctcgggccagctcaccctcacgcagatggtcgactttgccagttctcag
ccgaacatggactacttctcgttcaacgatgacgacatgacgcaggatagcattgtggaa
gagctggtccagatggaggagcagatgaaactgaagggcctctttgggaactgtgttgac
gtgtccgggttgcaaggtcagtcggccggcggtcagggctctatcctcgccgcccatcaa
accagttcgaccttctaccactcgactcacagcagcaccaccccggttcagacccccnnc
ccgactccgacacccaccccgacgccaactcccacttctgagatgacgctcgcgcacagc
ctgacccgagagagcccctgctcccgaatggctcccgtcaccccaatagatggagcaatg
ggccggcacaccccaattagcacgccgctgtccaactgcagcagcagcgtgccgccgagc
cccgtggagtgcaggaacccttttgctttcactcccataaattcgagcatcacgggatat
catgatgcgagcatcgtctccagcagccctgtcaaacccatgcaaaggcccatggcgacg
caccctgacaaggccaagctggagtggatcaacaaccgttacaacagtaactctgccgga
cctctgtctaaccacagcatcggcattctgccaagctaccaagacctggtggacgatcag
tttcgcaaacctcacgcatttgcaattcctggccagtcgttccagtctcaggcgagccag
gacagcgctcactttggacgcattactccaatttctccagtgcagcagcagcaggcaagt
ggtgtaacgactcccaccaagcaggagagttttgccgtacctgcaccgctagataacaag
gcttccgcctcaactgcgtccaacactttccgttgccgcagcgttagtcccgctgtgcgg
cagaggaacttcagcggtaataccaaccctccagccaccaccacgagcaccacaacaacg
actcaagccgtggtctcgccctttaactcccccataacctcagaggtgctcagcatcctg
tccaacagccagactgtcagctctgtgcacagcatggtgcagcgcagccagtccgtacct
ctgaacatcatgatgcagagcgagatgctgcctgtgcagggtcagagtaacaccgccaag
atcaccagcgtcctcctcagcaagatggaagcagacggagacgactccgtccgtggtctg
ggcatcaacaacctcccctctaattacacggcccgcatgaacctcacccagattctagag
acggctccgagcttctcgggaggaaccgcatcccagaatcaactgcccgtcaactccagc
cctgctgccttcgagctccagcagcatggctacctcacagctggggacactcaagcacaa
gcaggtcccagtgagcaagaccagcaccagcagcagcagcagctccgagaagatcccgcg
cagacacaaccgcagcttctcctccagagcacacagcagcagcagcagcaggaggcggag
gatgaacagcagcaactcgatttcaacaacactgtcaaggacttgctgggcgaggacgga
ctcaatcccagctcccaactggtgggtcaggtcgcctcagagctcaacgcagtggcgtcc
gacttctccaatgacatcagactgacctcagatctgtccagtagcatcactgaccttaac
acgttggacgccaacttgctgtttgaccccaatcagcagcaggagcagtacgaagactcg
acactggaagaactaaagaacgacccacttttccagcagatatgcagtgatactgtgaat
tctggttttgagtggctagagagcaaagaccagcctactaccgtggagatgctgggttaa
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