Xiphophorus hellerii (green swordtail): 116731908
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Entry
116731908 CDS
T07363
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116731908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116731908
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116731908
03012 Translation factors [BR:
xhe03012
]
116731908
04131 Membrane trafficking [BR:
xhe04131
]
116731908
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116731908
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116731908
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116731908
Translation factors [BR:
xhe03012
]
Eukaryotic type
Elongation factors
116731908
Membrane trafficking [BR:
xhe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
116731908
Exosome [BR:
xhe04147
]
Exosomal proteins
Proteins found in most exosomes
116731908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
116731908
NCBI-ProteinID:
XP_032437690
LinkDB
All DBs
Position
13:1574603..1578427
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEIQKEVSTYIKK
IGYNPAAVAFVPISGWHGDNMLEASTKMNWFKGWKVERKDGNANGTTLLDALDAILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPPNLTTEVKSVEMHHESLT
EAVPGDNVGFNVKNVSVKEIRRGYVAGDSKNDPPKAADSFNAQVIILNHPGQINEGYAPV
LDCHTAHIACKFKELIEKIDRRSGKKLEDNPKFVKSGDAAIVKLIPQKPMVVEPFSNYPP
LGRFAVRDMRQTVAVGVIKAVDTKEVSGKTTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccacctccaccggccacctgatctacaaatgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgctgagatgggaaaaggctccttcaagtacgcctgggtgttg
gacaaactgaaggccgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccggcaagtactacgtgaccatcattgatgctcctggacacagggacttcatcaag
aacatgatcactggtacctcccaggctgactgcgccgtcctgatcgttgctgctggtgtt
ggtgagtttgaggctggtatctccaagaacggtcagacccgtgagcacgccctgctggcc
ttcaccctgggtgtgaagcagctcatcgttggtgtcaacaagatggactccactgagccc
ccttacagccaggcccgttttgaggaaatccaaaaggaagtgagcacctacatcaagaag
atcggctacaaccctgccgctgttgccttcgtccccatctctggatggcacggagacaac
atgctggaggccagtaccaagatgaactggttcaaaggatggaaggttgagcgcaaggat
ggcaatgccaacggaaccactctcctggatgccttggatgccatcctgccaccttcccgt
cccacagacaagccccttcgtctgcccctgcaggacgtctacaagattggcggcattgga
actgtcccagtcggtcgtgttgagaccggtgtcctgaagcccggcatggtcgtcaccttc
gctccccctaacctgaccactgaagtgaaatccgtggagatgcaccacgagtctctaact
gaagccgtgcccggtgacaatgttggcttcaacgtcaagaacgtctcagtcaaggaaatc
cgtcgtggatacgtcgctggagacagcaagaacgacccacccaaggccgccgacagcttc
aatgctcaggtcatcatcctgaaccacccaggtcagatcaacgagggttatgcccccgtt
ctggactgccacaccgctcacattgcctgcaagttcaaggagctgattgagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaagttcgtcaagtctggtgacgccgcc
atcgtcaagctgatcccccagaagcccatggtggtggagcccttctccaactaccctccc
cttggtcgttttgccgtgcgtgacatgaggcagactgtggctgtcggagtcatcaaggcc
gtcgacaccaaggaagtttccggaaagacgaccaaggctgcagagaaggcccagaagaag
aaatga
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