KEGG   Xiphophorus hellerii (green swordtail): 116731930
Entry
116731930         CDS       T07363                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116731930 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xhe03041]
    116731930 (sf3b4)
Spliceosome [BR:xhe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116731930 (sf3b4)
 Complex B
    116731930 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    116731930 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 116731930
NCBI-ProteinID: XP_032437712
LinkDB
Position
13:complement(14852377..14855559)
AA seq 391 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPTPVLTAMGTGIPIPGLPPP
GAFPPVPPPGTMPPAMPPSMGMPPTAGGVPPGSAGGPPPGPPPFPPGNMPPGMPQMPMPP
PAPPGMVPPPPAPPGSAQRAPLPPNMPPPPMGMPPRAPYPMAPPVPPGMRGPPPPMPPPG
YGAAHPRPPPFGFQRAPPMPPRPPGAPPRVP
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcagcgggaccaatttcggaaagaaatcaagatgcgactgtgtatgttggaggcttg
gatgagaaagtgtcggagccgttactgtgggagctgttcctgcaggccggtcctgtggtc
aacacacacatgcccaaagaccgggtcactggtcaacatcaaggttatggctttgtggag
tttcttagtgaggaggatgctgattatgccataaaaatcatgaatatgataaaactctat
ggcaaaccaattagggtcaataaggcctcagcacacaacaaaaacctggacgttggtgca
aacatcttcatcggtaatttggacccggagattgatgaaaaacttctctacgacacgttc
agtgcgtttggtgtgatcctccaaacaccaaagatcatgcgagaccccgacacaggcaac
tctaagggttacgctttcatcaattttgccagctttgacgcttcggacgcggctatcgag
gccatgaacggccagtacctctgcaacagacccattacggtgtcgtacgcatttaaaaag
gattccaaaggggaacgccacggttcggccgcagagcgactgctggctgcacagaacccg
ctctcccaggccgacaggccgcaccagctgttcgcagatgctccgcccccgccgtctgca
ccaacaccagtcctcactgcgatgggaacaggaattcccattccaggtctcccgcctcct
ggtgcgtttcctcctgttccccctcctggaacgatgcccccagcaatgccgccttctatg
ggcatgcctccaacagcaggaggtgttccgccagggtctgccggtggacctccacctgga
ccaccaccgttccctcctggcaacatgcctccaggtatgcctcagatgcccatgccacct
cctgctcctcctggcatggtgcccccacctcctgctcctccaggatcggctcagagggct
ccgctgccccccaacatgccgccaccaccaatgggcatgcctcccagggcaccatacccc
atggctcctcctgtgcctccaggtatgcgagggcctcctcctcccatgcctccgcctggc
tacggcgcggctcatcctcgtccgcctccttttggttttcagagagctcctccgatgcca
cccaggcccccaggtgcccctcctcgggtgccttaa

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