Xiphophorus hellerii (green swordtail): 116731979
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Entry
116731979 CDS
T07363
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhe03032
]
116731979 (recql4)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116731979 (recql4)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116731979 (recql4)
DNA replication proteins [BR:
xhe03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
116731979 (recql4)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
116731979 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
zf-CCHC_5
ResIII
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
116731979
NCBI-ProteinID:
XP_032437813
LinkDB
All DBs
Position
13:12978167..12997569
Genome browser
AA seq
1506 aa
AA seq
DB search
MDRYNEVKLLLKSWERGFLQQHQRKPSKEDIDQAPEETRRLYKEYRSLKQAKVNDASSGH
REITAEINPTNKQESDCWGAHLNRKAMPLPAPRLTSQEKHSLLASSQYYGLKLKNNLSAL
SQEKPVSLKKSLRTGRVPLNSLKDDQPIQNNRLGLSIGSAKNSSEDEHQEILSPRLIKPP
FGSVTSPSPHAAEPEERFEPEPVEAAISNSVDDDHRIGANSQFQIAKASFANRSSSLLSP
PSPQFAPTSTGKENEDAGGKEENSHSGSPAGSVDLGASAGFNRSPTFLVGSGGSLAKRAS
VANRLSVVDRNWLERCQVFGEMEAEEIPGGGNQEIKVKKRQEKEVKGGKAEGDLEGERNE
SVDLGQEEKLADPDPNCAQEDSGKSKRERAGKTERGKSSRLPDDDSEDGLKSKGTKKKRQ
RDGDDVEETAKKRRKNPKKKEERSSLSPDSTDGGEKKKQKSKRKDGDEEETTKGAKTTPQ
ENLLGEIQEEFRTNRVYQRQPVRTRGTKGVEGNFVKINLKKKSHVKGYALRGVGLRKQLY
MQKFQLKGERFGGGGGFFGRGRRGGFRGAPSRQSDTCYRCGGSGHWAVDCTGPAPPPPVS
EDQPAEEEPFELPTLEDVARATGTLQPQPLAASSCVNAEKRQQETGADSRRTDEMLLNVI
HPDYERPAPPPPMDPLYRLTEDGKVQDTPAEVFAALRELGYQSFRPGQEKAIMRILAGLS
TLVVLSTGMGKSLCYQLPAFLYAQRSKCITLVISPLVSLMDDQLSGLPTKLKAACIHSNM
TMKQREAAIEKVKSGQVCVLLLSPEALVGGGGSGPGCLPSAQELPPVAFACIDEAHCVSE
WSHNFRPCYLRLCKVLRERLGVKCLLGLTATATLSTALDIAQHLDISDKDGIAVRSAAVP
PNLNLSVSTDGEKDQALVSLLKGDRFGCLDSIIVYCTRREETVRVAALLRTCLQGVVLRE
NTQISSSNQTEDNPVGQKKKELARKKIRKPLKWQAEAYHAGLSGSERRRVQNNFMCGELR
IVVATVAFGMGLDKSDVRGIVHYNMPKSFESYVQEIGRAGRDGLPAHCHLFLDPEGGDLH
ELRRHIYADTVDYYIIKKLVQRVFPACKCQKMHQKQQELWKDVGDADLLEMMDVCDENKL
GEKQEFTGSEAPDLDSAEHSEEGSVKKERGESKEGKDEGADWQSDQKTESCDWPEERLCH
THERAIPIQETVEALDVTEEGVETLLCYLELHPQRFVELLHPTLSVCKVRCYDGPRQLQK
ITKICPPVAVALARKRMRGERVERFDQVEFDVVEVADTMGWQLPLVKRGLRQLQWSTDRG
GGRSGVLVEFSSPSFYFRSYGDLSDEEMDKVCQFLYNRVQDQEKTQLYQLTTCFKAFKSV
AFQTVTSCLDDLDENRSLQLKNLLSEYFDKRRDRDHSLQPEDLEELDKYKLLDWESQIRV
DIRGFLANRSDEKFSGRAVARILHGIGSPCYPAQIYGKDRRFWRKYIHFDFNQLIRLATQ
EILHFK
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctacaacgaggtgaaactgctgctgaaaagctgggaacggggttttctccag
cagcaccagaggaaacccagtaaggaggacattgaccaggctccagaggagaccaggagg
ctgtataaggagtacaggagtttaaaacaagctaaagtaaacgatgcatccagcggccat
agagagatcacagcagagatcaacccaacaaataagcaggaatcagattgttggggagcc
catctcaatcgtaaagcaatgccgctacctgctccaaggctgacgtctcaggaaaaacac
agtctcctggcttcatcgcagtattacggcctgaagcttaaaaacaacctttctgcactc
agtcaggagaaaccagtttctctgaagaaatcccttcgtactggtcgagttcctctcaat
tccttaaaagatgatcaaccaatacagaacaacagactcggcttatcaattggttctgct
aaaaattcatctgaggatgaacaccaggagattctctccccaagattgataaagcctcca
tttgggtcagtgacctctccgtctccccatgcagctgagcctgaagagcgatttgaacca
gaaccagtagaagctgctatcagtaattctgtcgatgatgatcatagaatcggtgctaat
tcccagtttcagatcgctaaagcttcttttgcaaacagatcctcctctcttttatcacct
ccatcccctcaatttgctcctacaagcacaggaaaggaaaatgaagacgcaggagggaaa
gaagaaaattcccactcaggaagtccagctgggagtgtcgatctcggcgcttcggctggt
tttaatcgaagcccgacttttctcgtcgggtcaggagggagtttagctaaacgagcctct
gttgccaatagactgagcgtcgttgacaggaactggttggagagatgtcaggtgtttggg
gagatggaagctgaggagattcccggaggaggaaatcaggaaattaaagtgaaaaaacga
caggagaaggaagtcaagggaggaaaagctgaaggagatttagagggtgaaagaaatgag
tcagtagatttggggcaagaagaaaagttagcagatccagatccaaattgtgctcaagaa
gattctggaaaaagcaaaagggagagagctgggaaaacagaaagaggaaagtcgtctcgt
ttaccagatgatgacagtgaagatggtctgaaatcaaaagggacgaagaaaaagaggcag
agagacggagacgacgtggaagaaacggcaaaaaagaggcgaaaaaatcctaaaaagaaa
gaggagagatcgagtttaagccctgattcaactgatggaggagaaaagaagaagcagaaa
agcaaaagaaaagacggggatgaggaggaaacgaccaaaggagcaaaaacgacgccccag
gagaaccttttaggagaaattcaggaggagttcagaacaaatcgggtttatcagaggcag
ccagtcagaaccagaggaacaaaaggcgtagagggaaactttgtgaagataaacctgaag
aagaaatctcacgtgaaaggatacgcgttgaggggagttggtttgcgcaaacagctgtac
atgcagaagtttcagctgaaaggagagcggttcggcggaggcggaggattcttcggcaga
ggacggaggggcgggttcagaggggcgccgagtcggcagagcgacacctgctacaggtgt
ggaggaagcggacactgggctgtggactgcacaggaccagcccctccaccacctgtttct
gaggatcagcctgcagaagaggaaccgtttgaactgcccaccctggaagacgttgccagg
gcaacgggaacgttgcagcctcagcctctggcagcgtcttcctgtgtcaacgcagaaaaa
cggcaacaggaaaccggagcggacagcaggcggaccgatgagatgctgctcaacgtcatt
catcccgactacgagcggcccgctccgccaccgccgatggatccgctttatcgtctcaca
gaagacgggaaagtccaggacactcctgctgaagtgtttgcagctctgagagaactgggc
taccagtcattcagacctgggcaggaaaaggccatcatgaggatcctggcagggctctcc
accctggtggtgctgtccactggaatgggtaaatctctctgctatcagctaccagctttt
ctgtacgcacagaggtcaaagtgcatcactctggtcatttcccctctagtttctctaatg
gatgatcagctttcggggttgcccaccaagctaaaggcagcctgcatccactccaacatg
acgatgaaacagagagaagctgctatagaaaaggtgaagtccggccaggtgtgtgtgctg
cttctctctccagaggctttggtcggtggaggaggttcaggtccaggatgtctgccctct
gctcaggagctccctccggtggctttcgcctgtatagacgaggctcactgcgtgtctgag
tggtcacacaacttcagaccctgctacttaaggctttgtaaggtgcttcgggaacgcctc
ggagtcaagtgtttgctgggactcacggctacggccactttgtccacggcgctggacatc
gctcagcatctggacatcagcgataaagacggaatagctgtgcggtctgcagccgtgccc
ccgaacctcaacctgtccgtgtccacagatggagagaaagaccaggctttggtttctctg
ttgaaaggcgatcgttttggctgtttggactccatcatagtctactgcaccagacgagag
gagactgtccgagtggctgcactgctgcggacctgcctgcagggggtggtgttaagagaa
aatacccaaataagcagcagcaaccagacagaggacaacccagtggggcagaagaagaag
gaactggctcgtaagaaaatccgtaaacccttgaaatggcaggctgaggcgtaccatgcc
ggcctgtcgggttcggagcgccgccgggtccagaacaacttcatgtgtggggaactccgg
atcgtagtggccactgtggcgtttggcatggggctggacaaatccgacgttcgtggaatc
gtccactacaacatgccaaagagttttgagagctacgttcaggaaattgggagggctgga
agggatggacttccagcacactgccacctcttcctggacccggagggtggcgacctccat
gagctccgccgccacatctacgcagacactgtggactactacataatcaagaaactggtg
cagagggtttttcctgcatgtaaatgtcagaagatgcaccagaagcagcaggaactctgg
aaggatgttggagacgctgatctgctggagatgatggatgtctgtgatgaaaataaactc
ggagaaaagcaagaattcactggctcagaggcgcctgacctcgattcagctgagcacagc
gaggaaggaagcgtaaaaaaggagcggggcgagtcaaaagaaggtaaagacgagggagcg
gattggcagagtgaccagaaaacggagagctgtgattggccggaggagcgtctgtgtcac
acccatgaaagagcgattcccatccaggaaactgtggaggctctggacgtcacagaggaa
ggtgttgaaacgctgctttgctacctggagctgcatccacagcggtttgttgagcttctc
catccgactctgtccgtgtgtaaagtcaggtgctacgatggacccagacagctccaaaaa
atcacaaaaatttgcccgccggttgccgtggcgttggccaggaagagaatgaggggcgag
cgcgtggagcggttcgatcaggtggagtttgatgtcgttgaggtggcggacacgatggga
tggcagcttcccctggtgaagaggggcctgagacagctgcagtggagcacagacagaggt
ggtggacgaagcggtgtcttggttgaattttcttccccgtctttttatttccgatcgtat
ggcgacctgagcgacgaggagatggacaaagtttgtcaattcctttataatcgagtccag
gaccaagaaaaaacacaactttaccaactcacaacctgcttcaaagccttcaagagtgtt
gctttccaaactgtgacgtcctgtctggacgacttggatgagaatcgcagcttgcagctg
aaaaacctcctttcagaatactttgacaagcggcgagacagagatcactcgctgcaaccg
gaggacctggaagagctcgacaaatacaagcttttggactgggagagtcagatcagagtc
gacatcagaggttttcttgccaacagaagtgatgagaagttttcagggagagctgttgca
agaattttgcacggtataggcagtccttgttatccggctcagatatatggcaaagatcga
cgtttttggaggaaatacatccactttgacttcaaccaactcatccgactcgctactcag
gagattcttcacttcaagtga
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