Xiphophorus hellerii (green swordtail): 116732127
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Entry
116732127 CDS
T07363
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
xhe03015
mRNA surveillance pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116732127
09122 Translation
03013 Nucleocytoplasmic transport
116732127
03015 mRNA surveillance pathway
116732127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116732127
03041 Spliceosome [BR:
xhe03041
]
116732127
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116732127
Spliceosome [BR:
xhe03041
]
Complex C
Other components
EJC/TREX
116732127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
116732127
NCBI-ProteinID:
XP_032438002
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All DBs
Position
14:11225980..11251143
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AA seq
1192 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQRSSSSHS
GLQPNSQIGEEMCQNSFIKQYLAQQQELLRQRLAREAKKEEEADESATGPEEDEDHSEDN
DSPSFVRKHPGTLDQPSAPEAGGENLVIGHRPAAASHHRESTEAPRARTQRSSFQQGHKE
PAAASPPRAVASFSLRVLGQPDSQGHPATAPPGQEKAATSLSSPRTAQPALNLSRSARGS
ADNHVQNDSDEDDDDDSDDDEDWGPSSGGARKRKAAVPSKQQVAASMSSSAAARSKRKLQ
PPQHIPPPQVHDTPMQLRHPTPPPSPPPNLFPLPDTPKQSPPDDQERDGVRDPGMGSFPP
PAMQRQDSDSSSGSSSPEPPAKRHSGPLSLLMHRMESEEATSSPGFSGETAHSTATCSSE
SPLQSVETKMQQETREMEDEKQLKKEKESLKAQEREREKKRLEEEREKERKRLEEEKKQR
LKEEQEKEKRHQEEENEKKRREEEKRRETSLKEEEEEKKVKNDRRAAAEEKDSGSSSDSD
SKSESSSRSSSSSSSSSSSRDKIQPASQLKKADQEQEPEVHKKTEFRKDSEKPNLSKREV
SEPSTAAVTEAEPDSESSMAQQPASGAEPESSESRMEESTTPKAFAARKISLSSSKVSPA
STDGGAGESETGSAAGRKRRWGSSTAVTVKKPSISITTDSLKSLIPDIKVNQEAVMDLHP
EELQMSGDEENSDAGRSDPDKGLKIRRTVTQVVPSESQENGQTNVEEEMEKSEDEKQHKT
SRDTKKSSLSDETSEPQMSVKLEGEPKKVSPSDSLVRRSISQQKSGVSVTIDDPVRATRQ
PSPPRGKVSNIIHVINLVRPFTLLQLKELLNRTGSVVEEGFWIDKIKSHCYVTYTTTEEA
VATRTALHGVKWPPSNPKVLGVDFCEQDELDYHKGIRKPEKDQDHAAPAAPPQPRLPPLM
PVRDRDKDQDRDRDRERDRERDRDRGVRDLLAERQREMERRERARGEREWDRDKVREFAR
PGEEGRRSRSRERERRRRERAKSKEKKTDKKEKGDEPPAKLLDDLFLKTKAAPCIYWLPL
TEEQANQRVSDRVERQKERERKRKELEEEDKKRDEEKKERLKGREKEGGGGGGGAAASSG
VPGRGGDAEKERGRDREGDKRRDSNHRSRRPSPGPASARRSRSRSNPRDRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctttacagtcgctccgagttgctgat
ttgaaagctgctctggagcaaaggaacctaccgaaaagcgggcagaaaaacacactcata
aagagacttaaaggggctctgatgctggaaaacctccagaggtcatcgtcttctcacagt
gggctgcagcctaactctcagataggagaagagatgtgtcagaacagtttcattaaacag
tacctggcccagcagcaagagctcctacgtcagagacttgcgagagaggctaaaaaggaa
gaggaggctgacgaaagcgcaaccggaccagaagaggatgaagaccactcggaagacaat
gacagcccttcctttgtcaggaagcatccaggcaccctggaccagccctcggctcctgag
gccggaggagaaaatttggtgattggtcaccgacctgccgctgcgtcccaccaccgagag
tccaccgaagctccaagagccaggacgcagcggtcctccttccagcagggacacaaggag
ccagcggccgcctcccctcctcgagccgttgcctccttctcgctgcgtgtcctgggacaa
ccggacagccagggacaccctgccacggcgccccccggccaggagaaggccgctacctcc
ctaagctctcccagaacggcccagcctgcactcaatctcagccgatccgcccgtggttcg
gctgacaaccacgtccagaacgacagcgacgaagacgacgacgatgacagcgacgacgac
gaggactgggggcccagttctggaggggctcggaagagaaaggcggcggttccctcgaag
cagcaggtggctgccagtatgtcgtcatcagctgcggcgagatccaaacgcaagctccag
cctcctcagcacatcccacctccacaggtccacgacactcccatgcagctacgccacccc
acacctcctccatctccacctccgaacctgttccccctgcccgacactccaaagcaaagc
ccccccgacgatcaggaacgagacggtgtacgtgacccaggaatggggtccttcccacct
cccgccatgcagaggcaggactccgactccagctccggctccagcagccccgaaccgccg
gcgaagcgtcactccggcccgctgtcactgctcatgcacaggatggagtcagaggaagca
acctcatcccccgggttctccggagaaacggcacactcgactgccacgtgttccagcgaa
tccccccttcaatcagtggaaaccaaaatgcaacaggaaaccagagagatggaggatgag
aaacagctgaagaaggagaaggagagtcttaaagcacaggaacgagaaagggagaagaaa
cgcttggaggaggagagggagaaggagagaaaacggctggaagaggagaagaagcagcgg
ctgaaagaggaacaggaaaaggagaaaagacaccaggaagaggaaaacgaaaagaaacgc
agggaggaggagaagagacgagagacgagcctgaaagaggaggaagaagagaaaaaagtg
aagaacgaccggagagcagcagctgaggaaaaagattcaggttcctcctctgattccgac
tccaaatcagagtcctcctcacgctcatcatcgtcatcctcctcgtcttcctcctccagg
gataaaattcaacctgccagtcagctgaagaaagcagaccaagagcaagagcctgaggtt
cataaaaagaccgaattcagaaaagactcagagaaacctaacctttcaaaaagggaggtg
tctgaaccgagcacagccgctgttacggaagcagaaccggactctgagagctccatggcc
cagcagccagcttctggggctgagccagagagcagcgagagccgcatggaggagagcacc
actcctaaggcttttgctgctcgcaagatctccctgtccagcagcaaggtgtctccggcc
agcacagatggaggggcgggagagtccgaaacaggaagtgcagcagggaggaagaggcgg
tggggctccagcacagcagtcacggttaagaagccatcgatcagcattaccacagactcc
ctgaagtctttgattccagacatcaaggtgaaccaggaagcagtgatggaccttcacccc
gaggagctgcagatgtccggagacgaggagaactccgacgccggtcggagcgacccagac
aaaggtctcaagattcgacgcaccgtcacgcaggttgttcccagtgaaagccaggaaaac
ggccagactaacgtagaagaagaaatggagaaatcagaggacgaaaaacaacacaagact
tctagagacacaaagaagagcagtctctctgatgaaacgtccgaaccacagatgtctgtc
aaactagaaggagagccaaagaaagtgtctcccagcgacagtctggtgcgacgctccatc
agtcagcagaagtctggcgtttccgtcaccatcgacgaccccgtgcgcgccaccaggcag
ccgtcgccgcctcgggggaaagtttctaacatcatccatgttataaacctggtccgaccg
ttcactctgctccaactcaaagagctgctgaaccgaacggggagcgtggtggaggaaggc
ttctggatcgacaagatcaagtctcactgctacgtcacgtacacgacgacagaggaagca
gtcgccaccaggacggctcttcatggagtcaaatggccgcctagcaaccccaaggtgctg
ggtgtggacttctgtgagcaagatgagctggattatcacaaaggcatccggaagccggag
aaagaccaggatcacgctgccccggctgcccctcctcagccccgactgccccctctgatg
cctgtgcgagacagggacaaagaccaggacagggacagagaccgcgagcgggacagggag
cgggacagggacagaggtgtgcgggacctgctggcagagcgacagagggagatggagcgg
cgggagcgggcgcgaggagagcgggaatgggaccgggacaaggtgcgggaatttgcgaga
cccggagaggagggccggcgatcgcgatccagggagagggagcgcaggaggagggagcga
gccaagagtaaagaaaagaagaccgacaagaaggaaaaaggagatgagcctcctgctaaa
ctgctagatgacttgttcctcaagaccaaagcagctccctgtatatactggctccccctc
actgaggagcaggcgaaccagagggtttcagaccgcgtggaacggcagaaggagcgcgag
cgaaagcgcaaggagctggaggaggaggacaaaaaacgtgacgaggagaaaaaagagagg
ctcaagggccgggagaaggagggcggaggaggcggcggcggggccgcagcgagcagcggg
gtgcctgggagaggaggcgatgccgagaaggagcggggccgagacagagagggggacaag
aggagggacagcaaccaccgatccaggcgaccctcgccggggcccgccagcgcccggcgt
tcccgtagccgcagcaacccccgggacaggcgccgctga
DBGET
integrated database retrieval system
