Xiphophorus hellerii (green swordtail): 116732185
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Entry
116732185 CDS
T07363
Symbol
rbpj
Name
(RefSeq) recombining binding protein suppressor of hairless
KO
K06053
recombining binding protein suppressor of hairless
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116732185 (rbpj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116732185 (rbpj)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Other transcription factors
Others
116732185 (rbpj)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
116732185
NCBI-ProteinID:
XP_032438069
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Position
14:11702669..11752412
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AA seq
490 aa
AA seq
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MAPVVTGKFGERPQPQRLTREAMRNYLKERGDQTVMILHAKVAQKSYGNEKRFFCPPPCV
YLMGSGWKKKKEQMERDGCNEHESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDS
DKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCS
VTGMALPRLVIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPC
PKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVHSPVTPVPVVESLQLNGGGDVAMLEL
TGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDG
IIYSTTLTFTYTPEPGPRPHCSAAGAILRAGNASLHSNSSQEAAAPGVYGPNSAPGAGVT
SSSSAAAVVS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttgtgacagggaagtttggggagcgccctcagccacagcgcctaacaaga
gaagcgatgaggaattacctaaaggagcgaggcgaccaaaccgtcatgatcctgcacgca
aaagttgcacagaaatcctacggcaatgagaaaaggttcttctgccctcctccctgtgtc
tacctgatgggcagcggctggaagaaaaagaaggagcagatggagagagacggctgcaat
gagcacgagtcgcagccgtgtgccttcattggcatcggcaacagcgaccaagaaatgcaa
cagctcaacctagagggaaagaattattgcacagccaaaaccttgtacatatccgactcc
gacaagagaaagcacttcatgttgtccgtcaagatgttctacggcaacagcgcagacatt
ggcgtcttcctcagcaagaggatcaaagtcatctccaagccctccaaaaagaagcagtcc
ctcaaaaacgctgacctgtgcatcgcatcagggaccaaggtggcgctgttcaaccgactg
cgctcccaaacggtcagcacgcgctacctgcacgtggaggggggcaacttccacgccagt
tcccagcagtggggggctttttacatccacctgttggacgacgaggagtcagaaggagag
gagttcactgtgagagatggttacatccactacggccagacggtcaagctggtgtgctcg
gtcaccggcatggcgctgcccagactggtcattcgaaaagtcgacaagcagacggccctg
ctggacgccgacgacccagtttcccagctgcacaagtgtgccttctacctgaaggacacg
gagcgcatgtacctgtgcctttcccaagaaaggatcatccagtttcaagctactccatgc
ccaaaggaaccaaacaaggagatgatcaacgacggcgcctcctggacaatcatcagcacg
gacaaggcagagtacactttctacgagggcatgggccccgtccactcacccgtcacccct
gtgcctgtggtagagagcttacagcttaacggcggcggggatgttgccatgctggagctg
acggggcagaacttcacaccgaacctgcgggtttggttcggagacgtcgaggctgaaacc
atgtacaggtgtgcggagagcatgctgtgcgtggtgcccgacatctcggccttccgcgag
ggctggcgctgggtgcggcagcccgtccaggttcccgtcacgctggtgaggaacgacggc
atcatctactccaccacgctgaccttcacctacacgcccgagcccggcccgaggccgcac
tgcagcgccgccggcgccatcctgcgggccggcaacgccagcctgcacagcaacagcagc
caggaggccgccgcccccggcgtctacggccccaacagcgcccccggcgccggggtcacg
tcctcgtcctccgccgccgccgtggtgtcctaa
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