Xiphophorus hellerii (green swordtail): 116732314
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Entry
116732314 CDS
T07363
Symbol
arhgef11
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
116732314 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116732314 (arhgef11)
Membrane trafficking [BR:
xhe04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116732314 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
116732314
NCBI-ProteinID:
XP_032438280
LinkDB
All DBs
Position
14:7172356..7196942
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AA seq
1462 aa
AA seq
DB search
MSLRQPTSTLDSPFAAWLNSLTAGDSERRAPASQQREVTIDESSSPGLVHRCVVVQKDQL
GFGFTVCGERVKLVQNVRPGGAAVKAGVHEGDRIIKVNGSPVSTMTHQEVVKLIKSGPYV
ALTLQGPPPSATSVPLEPLPSDPTPNQRSSLTGEGPPPPPPPLPSGLGSTPSQRITGPKP
LQDPEVQKHASQILRKMLEQEEAELQGLMEEWLKNPSPSLEERIESAKRRAHQVRVKIQN
QEGTGSESVTNYIQAGEGRCYRSSCSLTGRLSIDSSEGDLEAFESPSSSPSLPFRTPYHR
RQNSDTHTLSDTGVKAQIISPEDEDEEGDGYAFNEMDGPFQDIELLKSRPAHMTVFMRYV
FTQLLDPNPLLFYLSVEAYLGSTPKDARALAPQICSHFLDPDAPLKIKVREEFLTEIENR
LHAQEDIRGPLSELQQQVLPDIQDQIQDYRNKQMIGLGSLFGEGDLHQLDGDPLKEKHVV
DRQVAALWEILSKHEEDRSSPLASAVLLYLRHSGIKLRDSKVFLGLSTEKDKWLAFLKPK
KPSSVKKEKDGEDKKRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVKNIIQQFENHTE
LPGEEDGDAVDPQRLSSSSLGEEGMDSPTVSVRLGRSGSLKAQGEDRRRGTVSSGDSVPR
SRSDVDMEDCEEREQPGLRLLQHSASSSASSSSARSLENPTPPYTPRSRRRSVDSQLALL
PDAAVLEDEVCDGQNWRDTVPPELLATLGPREVERQAVIYELFTTEVSHLRTLRVLDKVF
YRKMRSVLNSEELACIFPNLPQVYELHASLCEEMKKRRESPIVQNIGDVMLAKVEGAAGN
EFQEQASQLCCQQTQALELIKNKKRKDQRFAQIIQECEASPQCRRLQLKDLLVSEMLRLT
KYPLLLDKIIKYTEGGSSDLPSLQRAQACCRGILKAVNEDVRETEHRQRLSQYQRRLDAA
PQFKSLDLTTKRMIHEGPLVWKIGKDKQIEIQALLLSDCLVLLQKGPDDRLLLRYPFRWM
GGGGGVIADTKTSFSPLVKLDSLLVRSVATDKKALYIISTKETQIYELAAGSPSEKDTWK
DLLEKTIKASAPQSNHGSLPASSPSLRSISPALTEVHPEEEQSEFIGSHASTDDGMLGDR
PTDQPEANSSDEDHAVGVAEAALHDVETLRRLLLPDAVEDRRSHDTDSTPTNTMSNGNAD
GRRQDSLETVLDLCLSEPEPGQPEAPPPESRQPSAKVVRRAMVAGAPPPPSSPFAPDGTA
GDVSLPSDLSSHSRGEADTQGNFFYLVMPLDQGESVTDDLPDPPTPTASHFPQPPQDVSS
SQTQPEEKEEEEEVAACCAEFIQSDSETMQMEVELEEDDNDNDGEGDETDPPPATQQSHV
IRNADEIFLTIEGLMSKLHKLKEIEKAHHKLLESLRDPSLSQESEDQPCHSATVSRTPSM
DRSSGDGKEGNPGDPRILSTGF
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccgccagcccacatccaccctggacagcccttttgctgcttggctcaacagt
ctgacagccggcgattcggagcgcagagcccctgccagccaacagagagaggtgacgata
gatgagagttcaagtcctggtctggtccacaggtgtgtagtggtgcagaaggaccagctc
ggtttcggcttcactgtctgtggagagagagtcaagcttgtgcagaacgtccgaccaggt
ggcgctgcagtcaaagctggggtacatgagggggaccggatcattaaggtgaacggctca
ccggtctccaccatgactcaccaggaagtggtaaagctcataaaatccggaccgtacgtc
gccctaacactacaaggaccgcccccgtccgccacctccgtgcccttggaacccctccct
tcagaccctacgcccaatcagaggtcttctctgaccggggagggtccaccccctccgcct
ccgcccttgccctccggactgggcagcaccccatcccaaagaatcactggacccaaaccg
ctacaagatccagaagtgcaaaaacatgcaagtcagatactcaggaaaatgttggagcag
gaagaggctgaactccagggcttgatggaggaatggttgaagaacccgtcgccgtcgctg
gaggagcgcatcgagagcgccaagaggagagctcaccaagtcagggtcaagattcagaat
caggagggaacgggatcagaatctgtcacaaactacatccaagcaggagaaggacgttgt
tacagatcttcctgttctctcacaggacggctgtcgatagactccagtgaaggagacttg
gaggcctttgagagtcccagctcctccccctcattacccttcaggaccccctatcaccga
cgccagaactcggacacacacaccctgtctgacacgggtgtcaaagcccagatcatcagc
cctgaggatgaagatgaagaaggtgatggctatgcctttaatgagatggacggtcccttc
caggacatcgagttgttgaagtcacggccggcacacatgacggtgttcatgagatacgtc
ttcacccagctgctggacccaaaccctctgctgttctacctgtctgtagaagcgtattta
ggctccacccctaaagacgcccgcgcactcgctcctcagatctgctcccacttcctggat
ccagatgctcccttgaaaatcaaagtgcgcgaggaatttctgacagaaatagagaaccgc
cttcacgcccaggaggacatccgagggcctctgtccgagctgcagcagcaggttctgcct
gacatccaggatcagattcaagactacaggaacaagcagatgattggtctgggctctctg
ttcggagaaggagacctgcatcagctggacggagaccccctgaaggagaagcatgtggtg
gacagacaggtcgccgctctctgggagattctatcaaagcatgaagaggacagaagctct
cctctggcctcagctgtgctcctctacctgcgacactccggcatcaagctcagagactcc
aaggtcttcctcggcctgagcacggagaaggacaagtggctggcttttctgaaacccaaa
aagccgagcagcgtgaagaaagagaaagatggagaggataagaagagaaaccccatcctg
aagtacatcggcaaaccccggagcacatctcagtccacattccacgtcccgttgtcgccc
acagaagtgcgtcccggcagcgtgaagaacatcattcagcagttcgagaaccacacagag
ctcccaggagaggaggacggggatgctgtggacccccagaggctctcctccagcagcttg
ggagaggaaggcatggacagtcccacggtctcggtgcgtctggggcgcagcgggtcgttg
aaggctcagggggaagaccgccggcggggcactgtctccagcggggactcggtgccccgc
tctcgcagcgacgtggacatggaggactgcgaggagagggagcaaccgggcctccggctg
ctccagcacagcgcctcgtcgtccgcgtccagcagctccgctaggtcccttgagaaccct
acacccccatacacccctcggtccagacgcaggagtgtggactcacagctggccctgctg
ccagacgccgcggtgctggaggacgaggtgtgtgacggtcagaactggagggacacggtt
ccccctgagctcctggcgaccctcggccccagggaagtggagcggcaagccgtcatttac
gagctgttcaccactgaggtgtcccaccttcggaccttacgggttcttgacaaggtgttt
taccggaagatgagatctgtgctgaactcggaggagctggcctgcatcttcccaaacctg
cctcaggtctacgaactccacgcaagtctttgtgaggagatgaagaagcgacgagagagc
cccatcgttcagaacatcggagacgtcatgctggccaaggttgagggcgcagctggaaac
gagtttcaggagcaggcgtcgcagctgtgctgccagcagactcaggctctggagctcatc
aagaacaaaaaacggaaagatcaacgctttgcccaaatcatccaggagtgtgaggcgagt
cctcagtgtcggaggctgcagctcaaggacctgctggtgtccgagatgctgagactcacc
aagtatcctctgctgctcgacaagatcatcaaatacacagagggcgggtcatcggacctc
ccgtcgctgcagcgcgcccaggcttgttgccgaggcattctgaaggcggtcaacgaggac
gtgagggagacggagcaccggcagcgcctcagtcagtaccagcgccggctggacgccgcg
cctcagttcaagagtctggacctcaccacgaagagaatgattcacgaaggtcctctagtc
tggaagatcggcaaagacaagcagatagagatccaagcgctgctgctgtcggactgcctg
gtcctcctccagaaaggccccgacgaccggctgctgcttcgttatccgttccgctggatg
ggtggaggaggaggggtcattgcggacaccaagacctccttcagtcccctggtgaagctg
gactcgctgctcgtccgctccgtagctacagacaaaaaagcgctgtacatcatcagcacc
aaagagacgcagatttacgagctggcggcggggtcgccatctgagaaagacacctggaag
gatttacttgaaaagaccattaaagcttcagctccacagagcaatcacggatcacttcct
gcatcttctcccagcctccgcagcatttcacctgccttaactgaagtccatcctgaggag
gagcagtcggagtttatcgggagccacgcctccactgacgacggcatgctgggtgaccgt
cccaccgaccaacctgaagccaacagcagcgatgaggaccatgcagtgggcgtggccgaa
gcggctctgcacgacgtggaaacgctgcggaggctcctattgccggacgcggtcgaggac
cggaggagccacgatacggacagcacccccaccaacaccatgagcaacgggaacgccgac
ggacgacggcaggactccctggagaccgtcctggacctctgcctgagcgagccggagccc
gggcagccggaggccccgcccccagaaagcaggcagcccagcgccaaggtggtgcggaga
gctatggttgcgggtgctcctcctcctccttcttctccttttgcccctgacggcaccgcc
ggcgatgttagcctcccctccgatctgtcgtcgcattctagaggcgaggccgacacgcag
gggaacttcttctacctggtgatgccgttagaccaaggagagagcgtcaccgacgacctc
cccgaccctcctacacccaccgccagccacttccctcaacctccacaggacgtgtcatca
tcacagactcaaccggaggagaaagaagaagaagaagaagtagcggcctgctgcgcggag
ttcatccaatcagattcagaaactatgcaaatggaagtagagttagaggaagacgataat
gacaatgacggtgagggtgatgaaacggacccgcctccagctacacaacagagtcacgtg
atcagaaacgcggatgagatttttctcaccatcgagggcctgatgagcaagttgcacaag
ctgaaggaaatcgagaaggcccatcacaagctgctagaatctctcagagatccctccctc
agccaggagtcggaggaccagccgtgtcactcagcaaccgtctccaggacgccgtccatg
gaccgcagctcaggagacggtaaggagggaaacccgggagatcccagaatcctctcaacc
ggattctga
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integrated database retrieval system
