Xiphophorus hellerii (green swordtail): 116732367
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Entry
116732367 CDS
T07363
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116732367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116732367
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
L1 family
116732367
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
BiPBP_C
Ig_ADGRF3
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
116732367
NCBI-ProteinID:
XP_032438409
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Position
1:24362753..24379588
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AA seq
1178 aa
AA seq
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MRTLVGPGLLLFLWQSVWALDVPLETRQPPTIIKQSLQEHIVDPKETMVMECEAKGNPHP
IFSWRRNGKYFNVARDSQVSMRRRSGTLDIYAKHNPEQYEAEYQCIASNLYGSAYTHKIR
LRLYRPPVWPREILEPVIISAGLPLVLPCDAPPGPPKPETYWMSSCSYARPFNWPVQTAF
PTMQAVRQDRRVSMGVNGDLYFSNVLVNDSTTDYCCSARFPYKNMIQQKMPVVVKVLTTR
TVAEAAPTWLSPKGSSSSILVLQGEELLLECIAGGMPTPRITWTKDGEDLPVTSRMKVKN
FNKMIQIPKASFEDAGEYMCAATNRIGYIEHTITVRVRAAPFWLERPTNLILAPEENGQL
VCRSDGAPRPTISWSINGEPIETSTPQSNRQVSGETITFRSVSTENTAVYQCNASNEHGY
LLANAFVNVLHATPRIIGPRNELIKTIEGHRAFLDCRFFGSPVPELRWSRYGQGNLEGNR
FRIHRNGTLEIKRIQIEDQGTYLCVISNIAGRDENQVRVEVKEPIIIVTKPQSMKVLRGS
DVRLECGVKPDTAASITTAWMKNKKQAALSWRVSMDGSNLVITNVNRDDEGNYTCVIQND
LEQKSASAHLMVMDRPSPPTDLELSDPYERSVRLSWVPGDSNHSPITEYLVQYDDDDWIP
GKWKNLSTYPGSLNSVMLHLSPFTYYEFRVIANNEIGSSRPSRPSKRFQTSGAPPDVIPK
NLKGVGTWRNNMEISWEPLTWREWNGPHLKYLVWWRRRDSREEWKNATTKWLKYYIYDAD
TFTPYEIKVQAVNDFGLGPESPVVTGYSGEDRPIAAPLNLRVSDIESTQVTLHWDPVTRE
SIMGELKEYKVYYWRDSSQLRWHRVNRGMRSKVFPNSDPEPSGVVTDLIPYSNYKMYIVV
TNSQYEGPPSNHIHFSTPEGVPSAPKSFRIQQRHLDSIYVDWDLPEEPNGVITGYSLKYQ
TVNASREELKVEEFPPNVTSFSIRRYDRYTRYRFSVAAHTRIGLGEWHTEESPHYTTEIY
AQDQVDISTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVRNKKDISLELVDDKDQE
GTFDYRSLERIARVSTLPYPRREEERGLQRAQPSVAAILKRSDSDDSLVEYGEGGEIQFN
EDGSFIGQYTGTRRDVRDLDFGGNLELHSPMNTIYSLA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaggacactggttggaccagggctgctgctgtttctgtggcagagtgtttgggctttg
gacgtgcctcttgaaaccagacaacctccaaccatcataaagcagtcgttacaggagcac
attgtggatcccaaagaaacaatggtcatggagtgtgaagccaaaggcaaccctcatcct
attttctcatggaggcgtaacgggaagtacttcaatgtggcccgtgactcccaggtgtca
atgcgcaggcgctcagggactctagacatctatgccaaacacaatcctgaacagtacgaa
gcagagtatcagtgcattgcctccaatctgtatgggtccgcatacacacacaagatcaga
ctacggctgtacagacctcctgtgtggccacgggagattctggagcctgttataatcagc
gctggccttcctctggtcctgccctgcgacgctccaccaggcccccctaaacctgaaacc
tactggatgtccagctgttcgtatgcaagacctttcaactggcctgttcagacagctttt
cccaccatgcaggctgtgcggcaggatcgcagagtttccatgggggtcaatggagatttg
tatttctctaatgtgctggttaatgactccaccactgattactgctgtagcgctcgattt
ccttataagaatatgattcagcaaaagatgcctgtggttgtgaaggtgcttacaactcga
acagtggccgaggccgcccccacctggctgtctcccaaaggctcatccagctccattctt
gtgcttcaaggggaagagctgcttctcgagtgcatagctggagggatgccgactcctcgc
atcacctggactaaggacggcgaggacctgccagtgacatcacgtatgaaagtgaaaaac
ttcaacaaaatgattcaaattccaaaggcgtcttttgaagatgctggagagtacatgtgt
gcggctaccaacaggatcgggtatattgagcacacaataacagtcagggtcagagcggct
ccattctggttggaaaggcctacaaatttgatcttggctcctgaggaaaacggacagctg
gtgtgccgctctgatggggcccctcgaccgacaataagctggtccataaacggggaacca
attgagacgtctacaccacagtctaacaggcaggtgtctggagaaacgataacctttcgc
agtgtgtccacagaaaacactgctgtctatcagtgcaatgcctccaatgagcatgggtac
ctattggccaatgcatttgtcaatgtgctacatgcaacgcctcgtattattgggcccagg
aatgagctcataaagacgatagagggacatcgtgcctttttagactgtcgcttctttggc
tctcccgttcctgaactgcgatggtccagatacggacaaggaaatcttgagggaaatcgt
ttcaggatccataggaacgggactctggagatcaaacgcatccagatagaagaccagggt
acctatctgtgtgtgatcagcaacattgcagggagagatgagaatcaagtccgagtagag
gtcaaagagcccataataattgtgaccaaaccacagagtatgaaagtcctgcgtggaagt
gatgtgcgcctggagtgtggcgtaaaaccagacaccgctgcatcaatcacaacagcatgg
atgaaaaacaaaaagcaagctgctctcagttggagagtctctatggatggatcaaatctg
gtcattactaatgtaaatagagatgatgaagggaattacacatgtgtcatccaaaatgac
ctggaacagaagtctgcatcagcacacctaatggtgatggaccgaccaagtcctccgact
gacttggaactgtcagatccatatgagcgcagtgtgcgactcagttgggttcctggagac
agcaaccacagccccattactgagtatttagtgcagtatgatgatgatgactggatacca
ggaaagtggaaaaacctatcaacatacccaggaagtctcaactctgtcatgctgcatctg
tcacctttcacctactatgagttcagggttattgctaacaatgaaattggatcgagtcgt
cccagtcggccatctaagcgcttccagaccagcggcgcacctcctgatgtcattccaaag
aatctgaaaggggtgggtacatggagaaataacatggaaatcagctgggagcctctgaca
tggcgagagtggaatggaccacacttgaagtatctggtttggtggagaagaagagattcc
agagaggagtggaaaaatgcaactacaaagtggctgaagtattacatttatgacgcagac
acattcaccccctacgagatcaaagtccaggcagtcaatgactttgggcttggacctgag
tcgcccgtggtcactggttactctggtgaagaccgtccgatagcggcccccctgaacttg
agagtgtctgacatcgagagcactcaggttacattacattgggacccagtgacacgtgaa
tctattatgggagagctcaaggaatacaaggtctactactggagagacagcagccagctg
aggtggcacagggtcaacagaggcatgaggtcgaaagtgtttccaaacagcgatccagaa
ccttcaggcgttgtcactgacctcattccttatagcaattacaagatgtacatagtagtg
acaaacagccagtatgaaggaccgccaagtaatcacatccacttctccacaccggaagga
gtaccatctgctccaaaatccttcaggatccaacagcgacatctggacagcatttatgtt
gactgggacctaccagaagagcctaatggtgttatcactggttacagcctgaaataccag
acagtgaatgcaagcagagaagagctgaaagtggaggaattcccaccaaatgtgacaagc
ttctctattcggcgatacgaccgctacactcgctacagattctctgtggctgcacacact
cggatcgggctgggagaatggcatacggaggagtctccccactacaccacagagatatat
gctcaggaccaggtggacatttccactcaggggtggtttattggcatcatgtgtgctgtg
gctctcatcgtgctcatcctcctcatagtgtgtttcatcaagaggagccgaggaggaaaa
tatccagtgcgcaacaaaaaagacatttcattggaactggtggatgataaagatcaggag
ggaacatttgattacaggtcccttgaaaggatagcacgtgtctcaactttgccctatcct
cggcgagaggaggaaagagggctccagagagctcagccatctgtggcggcgatactgaag
agatcagacagtgatgacagcctggttgaatatggagaaggaggagaaatccagttcaat
gaggacggatcgttcatcggccagtatacaggaacaaggagagatgtcagggacttggac
tttggtggaaatctagagctccactctccgatgaataccatctactctctggcatga
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