Xiphophorus hellerii (green swordtail): 116732420
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Entry
116732420 CDS
T07363
Name
(RefSeq) uncharacterized protein LOC116732420
KO
K06252
tenascin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116732420
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116732420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116732420
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116732420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
D8C_UMOD
MtxA_IG-like
Lectin_C
PixA
Motif
Other DBs
NCBI-GeneID:
116732420
NCBI-ProteinID:
XP_032438459
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All DBs
Position
14:19930820..19982535
Genome browser
AA seq
2260 aa
AA seq
DB search
MDFRLILFGLTGALLSVACGQSHQYYFVNTSLNWTEAQSVCRRDYTDLVTIESSADVDDF
LSTTSNNTGKAWIGLYDDTINSWKWSLNDSSFYDPGEYSFRNWGPSQPDNNFGQQHCVRF
CGSSYLPVGQWDDIGCMETMQFVCYNGTVGGSPSYVLSNISLNWTEAQKFCRANYVDLAS
VRNQTENEIIRTLIGASNVWIGLYREKLWSDGSTSLFRNWADGEPNELSGDQCVAGSFSD
SGRWSDESCSLSLPFVCYKPIPPNAEGFTASAQNESSITLQWNKININTSFVLQFKGVET
FIRAPDGDGPVTHTVSSLTPGTNYTFTLFSVLDNVRSSGVSITAATGTDCITTNGVIECL
DPCDTYTVLNDTWRSTENTVYSSIHCDRYIAWSGWYRFYLGQTSAQIPEKCVAENRCGTA
APLWINGTHPVQLNEIVTRNVFGSWWGSCFSFASNAIQIKLCYGYYVYKLQQPSGCTLAY
CAEPQPFRVLTQDETSITLMWNKMNNNFSFVLQFNGTETNISAPDADGPVTYTVTSLTAG
TRYTFTLFYVFDNVRNSGEQLSAVTAPRNAKGFMKSGQDESSITLQWNKINNSTNFVLQY
DGTEIFIRAPDGDGPVIHTVSFLTAGTRYTFTLFSVLDNVRSSGVSITAFTGTDCITTNG
VVQCLDPCVNYTVLNDTWRSTENTVDYFSYIHCDWSISWSGWYRFYLGQTSAQIPEKCVA
ANRCGTSAPLWINGTHPVQLNEIVTRNVFGSRSGSCFYFAPNTIQIKLCYGYYVYKLQQP
SECYLAYCAEPQPFRVLTQDETSITLMWNKMNNNFSFVLQFNGTETNISAPDGDGPVTYT
VTSLTAGTRYTFTLFYVFDNVRSSGGQLTVVTVPENAKGFRASEQDESSITLRWNKVGSN
INFVLQYDGTETFIRAPDGDGPVTYTVASLTAGTRYTFTLFSVLDNVKSSGVSITAATGT
DCITTNGVVQCLDPCVNYTVLNDTWRSTENTVDYFSYIHCDWSISWSGWYRFYLGQTSAQ
IPEKCVAENRCGTAAPLWINGTHPVQLNEIVTRNVFGSWYGSCFSFASNAIQIKLCYGYY
VYKLQQPFGCNLAYCAEPQPFRVLTQDESSITLMWNKMNNSTSFVLQFKGTETNISAPDG
DGPVTYTVTSLTAGTRYTFTLFYVFENIRSSGGQLTAVTVPPNAEGFTASAQNESSITLQ
WNKININTSFVLQFDGVETFISAPDGDGPVIHTVSFLTAGTNYTFTLFSVLDNVRSSGVR
ITAATAPQNAEGFTSLTQDETSITLQWEIVNNNVSFILQYNETELNIAPPAGQQPLLLRV
SSLTAGTKYTFTLFSVFENVRSSGVSIAAVTAPENAEGFRAKEQNETSITLQWNKINNST
SFVLQFNGTETNISAPDGDGPVNHTVTSLTAGTKYTFILYHVFMNVRSSAVNITVATAPT
NAEGLRASEQDESSITLQWNKINNSTSFVLQFNGSETFITAPDGNGPVNYTVSSLTAGTK
YTFTLFSVFENVRSSGVQFEAVTAPQNAEGFTSLRQDETSITLQWEIVNNNVSFILQYNE
TELNIAPPAGQQPLLLRVSSLTAGTKYTFTLFSVFENVRSSGVSIAAVTAPENAEGFRAK
EQNETSITLQWNKINNSTSFVLQFNGTETNISAPDGDGPVNHTVTSLTAGTKYTFILYHV
FMNVRSSAVNITVATAPTNAEGLRASEQDESSITLQWNKINNSTSFVLQFNGSETFITAP
DGNGPVNYTVSSLTAGTKYTFTLFSVFENVRSSGVQFEAVTAPQNAEGFTSLRQDETSIT
LQWEIVNNNVSFILQYNETELNIAPPAGQQPLLLRVSSLTAGTKYTFTLFSVFENVRSSG
VSIAAVTAPENAEGFRAKEQNETSITLQWNKINNSTSFVLQFNGTETNISAPDGDGPVNH
TVTSLTAGTKYTFILYHVFMNVRSSAVNITVATAPANVGGFRQSDQDESSITLQWNKINI
NTNFVLQFNGTETFIRAADGNGPVTYTVSSLTAGTKYTFTLFSVFENVRSSGVQYEAATA
SKNAEGFRSSDQDESSITLQWNKINNNTSFVLQFNSMQTFIRAPDGVGPVTHTVSSLAAR
TRYTFTLFSVFENIKSSGVQLAAVTAPKNAEGFRPSEQEETSITLRWNKAGDNINFILQF
NGTETNIRAPDGDGPVNHTVTSLTPRTNYTFTLFSVFENVRSSGVSILAATGPNYVLGFN
LRLELPSTMTESEIEDALIELLRKYNLPPQLTLKIVSSKP
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaggctcatcctgtttgggctcacaggcgccctgctcagtgttgcctgtggc
caaagccatcagtactactttgtgaacacttcacttaattggacagaagctcagagcgtc
tgcagacgggactacactgatctggtcaccattgaaagctcagctgatgttgatgatttt
ctaagtaccacctccaataatacaggcaaggcctggataggtctttatgatgacacaata
aacagctggaaatggtccctaaatgacagcagcttctacgatcctggagaatattcattt
aggaactggggacctagccaacccgataataattttggacaacagcattgtgttagattt
tgcggttcaagttatctccctgtgggccaatgggatgatattgggtgcatggagacaatg
caatttgtgtgctataatggtacagtaggtggatcaccatcctatgttttgagtaacatt
tcactaaactggacagaagctcagaaattctgccgtgcgaattatgttgacctggccagt
gtacgaaatcagacagaaaatgaaatcatcagaaccctaataggtgccagcaatgtttgg
attggactgtatcgggaaaagctgtggtctgatggaagcacctctctgtttcgaaactgg
gcggatggcgaacccaatgagctctctggtgatcagtgtgttgctggatcatttagtgac
tctggaagatggtcggatgaaagttgcagcctgagtttgccatttgtctgctacaaacca
atcccaccaaatgcagaaggatttacagcttcagcacaaaatgagagcagcatcactctg
cagtggaataaaatcaacatcaacaccagttttgttctccagtttaaaggtgtggagaca
ttcatcagagcaccagatggagatggaccagtgactcacacagtctcatctctcactcct
ggaacaaactatacattcactctattctctgttcttgacaacgtcaggagcagtggagtc
agtattactgcagctactggcacagactgcatcaccaccaatggagttattgaatgtctt
gacccctgtgacacctacactgtactgaacgatacatggcgttcaacagagaatactgtc
tattcatctatacactgtgaccggtacattgcctggagtggttggtatcgcttttatttg
ggtcagaccagcgctcagataccagagaaatgtgtggcagaaaacagatgtggaactgct
gctcctttgtggataaacgggactcatccagtccaacttaatgaaattgtaacacgcaat
gtgtttggttcctggtggggttcctgcttctcttttgcctcaaacgccatccagatcaaa
ctttgttatggatactacgtctacaaacttcagcagccgtctggatgtacgctggcatat
tgtgcagaacctcaacccttcagagtattgacacaagatgagaccagcatcactctgatg
tggaacaagatgaacaacaactttagctttgttctccagtttaacggcacagagacaaac
atcagtgcaccagatgcagatggaccagtaacttacacagtcacatctctgactgctgga
actagatacacattcactcttttctatgtgtttgacaatgtgagaaacagtggagagcaa
ctgtcagctgtcactgctcctcgaaatgcaaaaggatttatgaagtcaggacaagatgag
agcagcatcactctgcagtggaataaaatcaacaacagcaccaactttgttctccagtat
gacggcacagagatattcatcagagcaccagatggagatggaccagtgatccacacagtc
tcttttctcactgctggaactagatacacattcactctcttctctgttcttgacaacgtc
aggagcagtggagtcagcattactgcatttactggcacagactgcatcaccaccaatgga
gttgttcaatgccttgacccctgtgtgaactacactgtactgaacgatacatggcgttca
acagagaatacagttgactacttttcatatatacactgtgactggtccatttcctggagt
ggttggtatcgcttttatttgggtcagaccagcgctcagataccagagaaatgtgtagca
gcaaacagatgtggaacttctgctcctttgtggataaacgggactcatccagtccaactt
aatgaaattgtaactcgcaatgtgtttggttcccggtcgggttcctgcttctattttgcc
ccaaacaccatccagatcaaactttgttatggatactacgtctacaaacttcagcagccg
tctgaatgttatctggcatattgtgcagaacctcaacccttcagagtattgacacaagat
gagaccagcatcactctgatgtggaacaagatgaacaacaactttagctttgttctccag
tttaacggcacagagacaaacatcagtgcaccagatggagatggaccagtaacttacaca
gtcacatctctgactgctggaactagatacacattcactctcttctatgtgtttgacaat
gtgagaagcagtggagggcaactgacagttgtcactgtgccagaaaatgcaaaaggcttc
agagcatcagaacaagatgagagcagcatcactctgcggtggaataaagtcggcagcaac
atcaactttgttctccagtatgacggcacagagacattcatcagagcaccagatggagat
ggaccagtgacctacactgtcgcatctctgactgctggaactagatacacattcactctt
ttctctgttcttgacaatgtcaagagcagtggagtcagtattactgcagctactggcaca
gactgcatcaccaccaatggagttgttcaatgccttgacccctgtgtgaactacactgta
ctgaacgatacatggcgttcaacagagaatacagttgactacttttcatatatacactgt
gactggtccatttcctggagtggttggtatcgcttttatttgggtcagaccagcgctcag
ataccagagaaatgtgtggcagaaaacagatgtggaactgctgctcctttgtggataaac
gggactcatccagtccaacttaatgaaatcgtaactcgcaacgtgtttggttcctggtat
ggttcctgcttctcttttgcctcaaacgccatccagatcaaactttgttatggatattac
gtctacaaacttcagcagccgtttggatgcaacctggcatattgtgcagaacctcaaccc
ttcagagtattgacacaagatgagagcagcatcactctgatgtggaacaagatgaacaac
agcaccagctttgttctccagtttaaaggcacagagacaaacatcagtgcaccagatgga
gatggaccagtaacttacacagtcacatctctgactgctggaactagatacacattcact
cttttctatgtgtttgagaacataagaagcagtggagggcaactgacagctgtcactgtc
ccaccaaatgcagaaggctttacagcttcagcacaaaatgagagcagcatcactctgcag
tggaataaaatcaacatcaacaccagctttgttctccagtttgatggtgtggagacattc
atcagtgcaccagatggagatggaccagtgatccacaccgtctcttttctcactgctgga
acaaactatacattcactctcttctctgttcttgacaacgtcaggagcagtggagtcagg
attactgcagctactgccccccaaaatgcagaaggcttcacatcactgacacaggatgag
accagtatcactctgcagtgggaaattgtcaataacaatgtcagcttcatcctccaatat
aatgaaacagagttgaatatagcaccacctgctggacaacaaccattacttctgagagtt
tcatctctcactgctggaaccaaatacacattcactctcttctctgtgtttgagaacgtc
agaagcagtggagtcagcattgctgcagtgactgctcctgaaaatgcagagggcttcaga
gcaaaagaacaaaatgagaccagcatcactctgcagtggaataaaatcaacaacagcacc
agctttgttctccagtttaacggcacagagacaaacatcagtgcaccagatggagatgga
ccagtgaaccatacagtcacatctctcactgctggaaccaaatatacattcatactctac
catgtgtttatgaatgttagaagcagtgctgtaaacatcacagttgctactgctcctaca
aatgcagaaggtttgagagcatcagaacaagatgagagcagcatcactctgcagtggaat
aaaatcaacaacagcaccagctttgttctccagtttaatggatcagagacattcatcaca
gcaccagatggaaatggaccagtgaactacacagtctcatctctcactgctggaaccaaa
tacacattcactctcttctctgtgtttgagaacgtcagaagcagtggagtacaatttgaa
gctgtcactgccccccaaaatgcagaaggcttcacatcactgagacaggatgagaccagt
atcactctgcagtgggaaattgtcaataacaatgtcagcttcatcctccaatataatgaa
acagagttgaatatagcaccacctgctggacaacaaccattacttctgagagtttcatct
ctcactgctggaaccaaatacacattcactctcttctctgtgtttgagaacgtcagaagc
agtggagtcagcattgctgcagtgactgctcctgaaaatgcagagggcttcagagcaaaa
gaacaaaatgagaccagcatcactctgcagtggaataaaatcaacaacagcaccagcttt
gttctccagtttaacggcacagagacaaacatcagtgcaccagatggagatggaccagtg
aaccatacagtcacatctctcactgctggaaccaaatatacattcatactctaccatgtg
tttatgaatgttagaagcagtgctgtaaacatcacagttgctactgctcctacaaatgca
gaaggtttgagagcatcagaacaagatgagagcagcatcactctgcagtggaataaaatc
aacaacagcaccagctttgttctccagtttaatggatcagagacattcatcacagcacca
gatggaaatggaccagtgaactacacagtctcatctctcactgctggaaccaaatacaca
ttcactctcttctctgtgtttgagaacgtcagaagcagtggagtacaatttgaagctgtc
actgccccccaaaatgcagaaggcttcacatcactgagacaggatgagaccagtatcact
ctgcagtgggaaattgtcaataacaatgtcagcttcatcctccaatataatgaaacagag
ttgaatatagcaccacctgctggacaacaaccattacttctgagagtttcatctctcact
gctggaaccaaatacacattcactctcttctctgtgtttgagaacgtcagaagcagtgga
gtcagcattgctgcagtgactgctcctgaaaatgcagagggcttcagagcaaaagaacaa
aatgagaccagcatcactctgcagtggaataaaatcaacaacagcaccagctttgttctc
cagtttaacggcacagagacaaacatcagtgcaccagatggagatggaccagtgaaccat
acagtcacatctctcactgctggaaccaaatatacattcatactctaccatgtgtttatg
aatgttagaagcagtgctgtaaacatcacagttgctactgctcccgcaaatgtagggggc
ttcaggcagtcagaccaagatgagagcagcatcactctgcagtggaataaaatcaacatc
aacaccaactttgttctccagtttaacggcacagagacattcatcagagcagcagatgga
aatggaccagtgacttacacagtctcatctctcactgctggaaccaaatacacattcact
ctcttctctgtgtttgagaacgtcagaagcagtggagtacaatatgaagctgcaactgca
tctaaaaatgcagaaggcttcaggtcatcagatcaagatgagagcagcatcactctgcag
tggaataaaatcaacaacaacaccagttttgttctccagtttaacagcatgcagacattc
atcagagcaccagatggagttggaccagtaactcacaccgtctcatctctagctgctaga
accagatacacattcactctcttctctgtgtttgagaacatcaaaagcagtggagtacaa
cttgctgctgtcactgcacctaaaaatgcagagggcttcagaccatcagaacaagaagag
accagcatcaccctgcggtggaataaagccggcgacaacatcaactttattctgcagttt
aacggcacagagacaaacatcagagcgccagatggagatggaccagtgaaccatacagtc
acatctctgacccctcgtacaaactacacattcactcttttctctgtgtttgaaaatgtc
agaagcagtggagtcagcatacttgcagctactggtccaaattatgttttgggatttaat
ctgaggttggagcttcccagcacaatgacagaatcagagatagaagatgctttgatagag
ctcctcagaaaatataatctgccgccacagcttactctgaaaatcgtttcttccaaacca
tga
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