Xiphophorus hellerii (green swordtail): 116732482
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Entry
116732482 CDS
T07363
Name
(RefSeq) basement membrane-specific heparan sulfate proteoglycan core protein-like isoform X1
KO
K06727
Fc receptor-like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xhe04090
]
116732482
CD molecules [BR:
xhe04090
]
Proteins
116732482
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
V-set
I-set
Ig_4
Ig_5
Ig_C19orf38
Collectrin
Mid2
MLANA
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
116732482
NCBI-ProteinID:
XP_032438590
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Position
14:complement(9252163..9272594)
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AA seq
903 aa
AA seq
DB search
MKPALLCMLGFFLLSSLLHGRAYEIKATLAADETTIPPGGSVTLTCSVGRYAGLTFELFR
KPQPTYQTRVSPRSDGVFIITEGGIYTCRGFKTEHNFMTTMSDEVIIQETEIKANLKADN
TTIPPGGSVTLTCSVDKPADLTFELFRGSSSTYQTRVSPRSDVVFIITEGGIYTCIGFKL
GTNFVTSMSDEVTINKRVSNRVSVTSQPNRSLIYRGEKVTLRCEIQDDGRNWWTYEWKPT
NRNFPSSSEYMINSATDADSGEYSCKGRRGYEFTGWSEAIRLTVSSDKPRATLKAEKRII
PAGGSVTLTCSVEGSTGWEFYWIRNGQYYSVVGSSRNTEPDGTIRVSEGGEYSCRGRRGD
SSFESETSKEVTIEETAPNKPSLILQPNWSQIYIGEKVTLRCEIQGGTEWTYEWRSTNRN
FPSSSEYSIISATESHSGKYSCRGKRGFSFTPWSNVVKITVSPKPHPVLSVSPSWPNPGA
SVTLSCEGLEHQSAGWRFFWYKAVPDTSKQNYLPSYSYELLPGSTNGTEQNSFIINGPTH
TAGYKCRAEREEPKFYTDYSEPKFFWSADPRPAASLSVNPDRVQHFRSDSVSLSCEGNSA
EWRVRRFIERDGLSDFTCSYWGTMTGSTCTFKPYYYMDGVFWCESKSGEFSNAVNITVQN
DNYDGVILVSPVHPVTEGDPVTLSCRDKKQNLLSNVFFYHNDKLINNDSREELKISAVSK
SDEGFYKCQHSGKESPRSWMSVRVTVSSPVSSSFPVMLIVGPVVGIVVIILIILLILLWR
CRRSKDLCCIRSKGSEVRGQSSTTNQPEGPEYKSLSHGNVHLYEMIGSAEASGHAADEAP
EVTYSLIEMKSFRKDRRQGGPEEGAVYSEVKTGAAGKSGPAAAEASVYSEIRKAPAVENS
AAM
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgctctgctctgcatgctgggctttttcttgctcagttctttgcttcatgga
cgtgcttatgaaatcaaggcaactctggctgcagacgaaacaaccataccaccagggggc
agtgtgacattaacctgttctgtgggcagatatgctggtttaacatttgagctcttcaga
aaacctcaacccacctatcagaccagagtttctcctcgatcagatggagttttcatcatc
actgaaggaggaatttacacctgcagaggatttaaaaccgaacataactttatgacaact
atgagtgatgaagttattatacaggaaactgaaatcaaggcaaatttgaaagcagacaac
acaaccataccaccagggggcagtgtgacattaacttgttctgtggacaaacctgctgat
ttaacatttgagctcttcagaggatcttcatccacctatcagaccagagtttctcctcga
tcagatgtagttttcatcatcacagaaggaggaatttacacctgcataggatttaaactt
gggacaaactttgtgacatctatgagtgatgaagtcaccattaataagagagtttccaac
agagtttcagtcacttcacaaccaaaccgatctctgatatacagaggagagaaagtcact
ctgagatgtgagatccaggatgatggaagaaattggtggacgtatgaatggaaaccaacc
aatagaaactttccatcatccagtgaatatatgatcaactcagctactgatgctgacagt
ggagaatacagctgtaagggtagaagaggctacgagtttacaggatggagtgaagccatc
agactgacagtgtcatctgataaacccagagccaccctgaaggcagagaaaagaatcata
ccagcagggggcagtgttacactgacctgctctgttgaaggatctactggctgggagttt
tactggatcagaaatggacaatattattctgtagttggatcctccagaaacacagaacca
gatggaaccatcagagtctcagagggaggagagtacagctgcagaggaagaagaggagac
tcatcttttgaatcagaaaccagtaaagaggtcaccattgaggaaactgctcccaataaa
cccagtttgattctgcaacccaactggtctcagatctacataggagagaaagtcactctg
agatgtgagatccagggaggaactgagtggacgtatgaatggagatcaaccaatagaaac
tttccatcatccagtgaatacagcatcatatcagctactgagtcccacagtggaaaatac
agctgcagaggaaaaagagggttttcctttacaccatggagtaatgttgttaaaataact
gtatcacccaaacctcatcctgtcctctctgtgtctccatcatggccgaatcctggagcc
tcagtgactctgagctgtgagggtttggagcatcaatcagcaggatggaggttcttctgg
tataaagctgttcctgacacatccaagcaaaactatctaccatcctacagctatgagctg
ctgcctggcagcaccaatgggactgagcagaactccttcatcattaatggaccgactcac
acagcaggatacaagtgcagagcagaaagagaagaaccaaagttttacactgattacagt
gaaccaaagtttttctggtctgcagatcctcgtccagcagcttctctctcagtgaatcct
gacagagttcaacacttcagatctgactctgtgtctctgagctgtgagggaaactctgct
gagtggagagtgaggaggtttatagaaagagatggactgtcagactttacctgctcctac
tgggggacaatgactggatctacatgcacctttaaaccatactattatatggatggagtg
ttctggtgtgagtcaaaatctggagagtttagcaacgcagtaaacatcactgtacagaat
gataattatgatggtgttatcctggtgagccctgttcatcctgtgactgaaggagatcct
gttactctgagctgcagagataaaaaacaaaatcttctctccaatgtgtttttctatcac
aatgataaactcatcaataatgacagcagagaggagctgaagatctctgcagtgtcaaag
tcagatgaaggtttctacaaatgtcaacattcaggaaaagagtcaccaaggagctggatg
tctgttagagtaactgtatccagtcctgtcagttcttcatttcctgtcatgttgatcgtt
ggaccagttgttggaatcgttgtcattattctcattattctcctgatcttgttgtggcgc
tgcagacggtccaaagatctttgctgcataaggtcaaagggctcagaggtcagaggtcag
agctccaccacaaaccagcctgaaggtcctgaatataaatctctttctcatggtaatgtt
catctctatgagatgatcggctcggctgaagcttctggacatgcagcagatgaagcccca
gaggttacatactctctcattgaaatgaaatcctttaggaaagacaggagacaaggtgga
ccagaagagggcgctgtttactctgaggtgaaaacaggagctgcagggaagtcgggtcct
gcagcagcggaggcatcagtttattctgaaatcagaaaagcaccagctgtggaaaacagt
gctgccatgtag
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