Xiphophorus hellerii (green swordtail): 116732489
Help
Entry
116732489 CDS
T07363
Name
(RefSeq) basement membrane-specific heparan sulfate proteoglycan core protein-like
KO
K06727
Fc receptor-like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xhe04090
]
116732489
CD molecules [BR:
xhe04090
]
Proteins
116732489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
V-set
ig
I-set
Ig_4
Ig_5
Ig-like_POM152
BCS1_N
Motif
Other DBs
NCBI-GeneID:
116732489
NCBI-ProteinID:
XP_032438600
LinkDB
All DBs
Position
14:complement(9487225..9494126)
Genome browser
AA seq
613 aa
AA seq
DB search
MNKGEDSDWEYKLSRNNKSYLSYIPHKSSTLFLHSGEYQCCRRRRSSNQTNCSNTVTVSA
DRPTATLTAGSTTIPVGGSVTLSCSVEPSAGWKYRWFRRTSDTPEAEITTNNEENREITV
TQGGIYRCDGKRGNKVFISHPSHDVTIKTTSPNKPSLILQPNWSQIYIGEKVTLRCEIQG
GTEWTYEWRSTNVNFPSSSEYSINYITESHSGDYSCRGNRNYELTEWSDAVRLTVISPKP
QPVLSVSPSWPNPGASVTLSCEGLELQSAGWRFFWYKTVPDPSSNSYSYELLSGSTNGTE
QNSFIINGPTHTAGFVCRAGRGEPEFYSYYSELKFIWSVDPRPAASLSVNPDRVQHFRSD
SVSLSCEGNSAEWRVMRFIERDGLSDCSYWGNMTGSTCTINPYYYRDGVFWCESKSGEFS
NAVNITVHDYNHDVIILVSPVHPVTEGDPVTLSCQDKKLKFLSNVFFYHNNKLINNDSRG
ELKISGVSKSDEGFYKCQHSGKESPRSWMSVRVTGSSPASSLFLVLLIIEPVVKILLVLL
LLLFLSCRRNNADKPRAPAYSQIELRNFRENYSTPIYANMNYQKKQKGKRSPAAADEVYS
EIRTRATVGNDIM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggagaagattctgactgggaatacaagctgagcaggaataataaatcatat
ctgtcctacataccacataaaagcagcacgttatttcttcatagtggtgaatatcagtgc
tgtcgtcgtaggaggagctcaaatcaaacaaactgcagtaatactgtcactgtttcagca
gacagacccacggccacattgacagcaggttcaacaaccataccagtagggggcagtgtg
acactgagctgctcagtggagccctctgctggatggaagtacagatggttcagacggacc
tcagacactcctgaagctgaaatcacaacaaataatgaagagaacagagaaatcactgtg
acacaaggaggaatctacaggtgtgatggaaagagaggaaataaagtcttcatcagccat
ccaagccatgacgttaccattaaaacaacctctcccaataaacccagtttgattctgcaa
cccaactggtctcagatctacataggagagaaagtcactctgagatgtgagatccaggga
ggaactgagtggacgtatgaatggagatcaaccaatgtaaactttccatcatccagtgaa
tacagcatcaactacattactgagtcccacagtggagattacagctgtagaggaaacaga
aactatgagctaacagagtggagtgatgctgtcagactgactgtgatatcacccaaacct
cagcctgtcctctctgtgtctccatcatggccgaatcctggagcctcagtgactctgagc
tgtgaaggtttggagcttcaatcagcaggatggaggttcttctggtataaaactgttcct
gatccatccagcaactcctacagctatgagctgctgtctggcagcaccaatgggactgag
cagaactccttcatcattaatggaccgactcacacagcaggatttgtgtgcagagcagga
agaggagaaccagagttttactcttattacagtgaactaaagtttatctggtctgtagat
cctcgtccagcagcttctctctcagtgaatcctgacagagttcaacacttcagatctgac
tctgtgtctctgagctgtgagggaaactctgctgagtggagagtgatgaggtttatagaa
cgagacggactgtcagactgctcctactgggggaacatgactggatctacatgtaccatt
aacccgtactattatagggatggagtgttctggtgcgagtcaaaatctggagagtttagc
aacgctgtcaacatcactgtacacgattataatcatgatgttattatcctggtgagccct
gttcatcctgtgactgagggagatcctgttactctgagctgccaagataaaaagctaaaa
tttctctccaatgtgtttttctatcataataataaactcatcaataatgacagcagaggg
gagctgaagatctctggagtgtcaaagtcagatgaaggtttctacaaatgtcaacattca
ggaaaagagtcaccaaggagctggatgtctgttagagtaactgggtccagtcctgccagc
tctttatttcttgtgctgttgatcatcgaaccagttgttaaaatccttctggttctcctc
ctgctcttgttcttgtcctgcagacggaacaacgcagacaaacccagagctcctgcatac
tcccagattgaactgagaaacttcagggaaaactactcaactccaatttatgctaacatg
aactatcagaaaaagcagaaaggaaagcgaagtcctgcagcagcagatgaagtttattct
gaaatcagaacaagagcaactgtgggtaacgatatcatgtag
DBGET
integrated database retrieval system
