Xiphophorus hellerii (green swordtail): 116732570
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Entry
116732570 CDS
T07363
Symbol
rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116732570 (rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116732570 (rora)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116732570 (rora)
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116732570 (rora)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116732570
NCBI-ProteinID:
XP_032438738
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Position
2:complement(9320431..9543804)
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AA seq
525 aa
AA seq
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MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRKQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSAVKCIPPDRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLR
ALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcgaaagcagacctgctcaagcaccaacagaggtatctcggtaacaaagaagacacac
acttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggtgtgataacatgtgaaggctgtaagggcttcttcaggaggagtcagcagagcaat
gcagcgtactcctgcccccgtcagaaaaactgcttgatcgaccgcaccagccgcaaccgc
tgccagcactgcaggctgcagaagtgcctggcagtgggaatgtcacgagatgcggtgaag
tttggccgcatgtcaaagaagcagcgagacagcctgtacgctgaggtccagaagcaccgg
ctgcagcagcagcagcgagaccaccaacagcagcccggagaggcagagccgctcacacct
agctacggcctctcagccaacggcctaacggagctacacgatgacctcagtggctacatg
gacggccacactcctgatggcagcaagcccgactcggcggtcagcagcttctacctagac
atccagccgtcccctgaccagtcgggcttagacatcaacggcatcaagccggagcccatc
tgcgactttgcccctggctctggcttttttccctactgctccttcaccaacggcgagacc
tcccccactgtttccatggctgaactagagcacctcgcccagaacatctcaaagtcacac
atggagacatgtcagtacctgagagaggagctgcagcagatgacctggcaggctttcctt
caggaagaggtggagagctaccagagcaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacagaggccattcagtatgtggtggagtttgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctctggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctatttcgatggaaaa
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctct
gcttttgtgttgatgtctgctgtgaaatgtattccaccagaccgatcctggcttcaggag
aaggtgaaagtggaaaaactccagcagaagatccaactggcccttcaacatgttctgcag
aagaaccacagagaggacggcattcttacaaagttgatatgcaaagtgtcgacactgcga
gcgctgtgcagtaggcatacagagaagctcacggctttcaaagcaatatacccagacatt
gtgcgtgcccacttcccccccttatataaggagctgttcggatcagactttgagcagtcc
atgcccgttgatgggtaa
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