Xiphophorus hellerii (green swordtail): 116732703
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Entry
116732703 CDS
T07363
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116732703 (dennd4c)
Membrane trafficking [BR:
xhe04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116732703 (dennd4c)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR_long
PPR_3
PPR
CBP_BcsO
Motif
Other DBs
NCBI-GeneID:
116732703
NCBI-ProteinID:
XP_032438933
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Position
14:19277738..19321789
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AA seq
1908 aa
AA seq
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MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSGGPKAPITDLAVINRSAGETAPEGFT
CIETTYSGQPANLNHGSLKSPELFLCYKRVRGKPPLIDIGVLYEGKDRLIQGCEVIQATP
YGRCANVNNSSANSQRIFVTLRRAPPVQPQNSLAVTDICVIITSKGETPPHTFCKVDRNL
NCGMWGSNVFLCYKKSVSASNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGSKIEC
WAPNTRDPLPVFSTFVLTISSGEKVYGSAIQFYEPYSVDLLSEKQNIQLGLLTAVEKKMI
PNRSVNTNKCICLLSRWPFFESFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYGTLLMNLGAENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKKHSNWKYLPKKPCKSLINSLSNLHHQLVTVAVRQTPHEDSAL
DLTPIDADFTWHKKKMSLEMEIQEAFLRFMASILKGYRSYLKPITQAPSEKATAADSLYD
LQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPFDKIND
KSTKVEGDSSEDTKLLELDESQKSEHTVFVMPPEPLADNGSEPAPQYTYKGFPRLQLSLF
DRPRELRPALSTRAAGASLSSSPALLAKRTKQEIKLAYKLAKRFYSNPPQWARCLFSHCY
SMWFICLPAGVRLAKSKSRAMQQAYNVLLKMRATEVEILDEVCYRVVMQLCGVWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNIVRGVAQFKQIQN
HTSSKKKTPTITTTAAPGEESGATDADNLSHGSAHSSNEVNGEEHNEDTADGCNTGRQSD
QGYGSKDELHQELAEPSPTEEHSAGQRNSDEKTLNGGDIAGSVDSAVAEPLSPVDVPSPV
PSIVRLSTGSFDGGRETKPGKLFRNLSKTDSVSLPDPDASLAVGDAPPPSQHQRQKAFLE
RSCSFSAETRAGMLLEKGVDHMASQMGADARILAAALSGTQSPPPHSKSKALFEDLEEES
GDDKNPSKEEARGEVKDEETKVKVTEIKKEKRERKQTESHEDESGARGATLERADVKAGA
DPLSLMVSENEESASISSQDPPRSVPTVVSRNLAEEIEMYMSLRSPLGSKSSSMELQQGQ
GDAPDVNQPEKPLERRPSLPVHPVKSAGSSPADTPKRSPKTVTRSKTFAVKMKTSASATA
SPAPKSSSLTALVKSSQAGSLGSVINTFSGIKMDSLLSGAKIDVLKSSMKHAANVGSKMW
GAMASAFTYSDDEDEQPQGAGGFPGGLDEHMLSSHDLAESPEKRTVSGLVANGLNQSSTS
LGSSSGSSDTGRGTQQTHVTPGRAGRGPDSEQSSSHHASSSSIYQNCALEVLMSSCSQCH
SCEALVYDEEIMAGWTADDSNLNTNCPFCRTAFLPLLHVEFHDLRMTPDFYMNPSASGES
IHSNTAQPTASSLADIKTPDLITFSEETKETPDNRPAVHKSLVPEPVQSDPLGLLVHPAA
GKQEKSSGTSLTRSNSVGGPLQSLDYTLRPGHGVSTTSLPCSLHEVSDVIGKKRPNPKPV
SVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPSHLPGLIL
TSEHCNNGVQLPLTSLSQDSKHVFVQLLWDNINLHQEPEEPLYLLWRTFLEKKGTLAPTD
HQEIRTLLNTIVRNIQTNDVYGPINLLLREIKRRPDGVKRQRSIYREILFLSLVALGREN
IDIEAFDREYRQAYDQLSPEQLKSLHRMDRPPSASIQWCLKCFGAPFI
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggcgggcctgactgac
aagtccacgcccctggagcaggacctgtcggaaaccaagtccggcgggccaaaggcgccc
atcaccgacctggctgtcattaacaggtccgccggtgaaactgccccggagggcttcacc
tgcatcgagaccacctacagtggccagccggccaacctcaaccatggcagcctcaagagt
ccagagctcttcctgtgctacaaaagggttcgggggaaaccgccgctcattgacatagga
gtgctgtatgaaggcaaggaccgtctgatccagggctgcgaggtcatccaggccacgccg
tacggacgctgcgccaacgtcaacaacagctccgccaactcgcagcgcatcttcgtcact
ttgcgccgagcccctccggtccagcctcagaattccctggcagtgacggacatctgcgtg
atcatcaccagcaagggcgagacaccgccacacaccttctgcaaagtggacaggaacctg
aactgtggcatgtggggttccaatgtgttcctgtgttacaagaaatcggtatcggcgtcc
aactctataagttacaaagcaggtttaatctttcgttaccctgaagaggactatgaatct
tttcctctgtcggagtctgtacctcttttctgtttgccaatgggttccaagatcgaatgc
tgggcgccgaacacccgcgaccctctgccggtcttctctacgtttgtcctaaccatctct
tctggtgaaaaggtttacggatcagccatccagttctacgaaccgtactctgttgatctt
ctgagcgagaagcagaatatccagctgggtctgctcaccgctgtagagaagaagatgatc
cccaaccgctccgtaaacaccaacaaatgcatctgtctgctgtcccgctggcccttcttc
gaatcgttccgcaagttcctgatgtttatctacaagctctcggtctcaggcccacatcca
ctgcccattgaaaagcacatctcgcacttcatgcacaatgtgtcatttccttcccctcaa
aggcccagaatccttgtccagctctcagcacatgacactttgatactgtctcagcccgtg
tgtactcccttacccctcagtggggcagattacggcactctgctgatgaatctgggtgca
gaaaactgcgccacgctgctgcactttgtcctgctggagagcaagattctgctgcactcg
ctgaggcccgccgtgctcaccggagtggctgaggctgtggtagctatgatcttccccttc
cagtggcagtgcccctacatcccgctgtgccccctgtctctggcaggcgtcctcaacgcg
ccatgtcctttcattgtgggcgtcgactcgcgctactttgacctgtacgaccccccgcca
gatgttgtctgtgtggacctggacaccaacaccatctatctgtcggatgaaaagaaacac
agcaactggaagtacctcccaaagaagccctgcaagagtctgatcaactcgctgagcaac
ttgcaccaccagctggtcacagtggcagttcgccaaactccacacgaggactcggctttg
gacctgacccccatcgacgcggacttcacgtggcacaagaagaagatgtccctggagatg
gagatccaggaagccttcctgcggttcatggcctccatcctgaagggctaccgctcctac
ctcaaacccatcacccaggcgccctctgagaaggccacggccgcggactccctttacgac
ctgcaaggtttcctaaaaagcagagaccgcgcccatcagaagttttactcccagctcaca
aagacccagatattcatccgttttatcgaggaatgcaccttcgtcagcgacaaagacacc
ggcctggcctttttcgatgactgtgtggagaagctttttccctttgataaaatcaacgac
aagagtaccaaggttgaaggagattcatctgaggacaccaaactgctggagctggatgag
tctcagaagagcgagcacacggttttcgtaatgcctccagagcctctggccgacaacgga
tctgaacccgcccctcaatacacatataaaggtttccccagactgcagctgagtctgttt
gaccggcccagagagttgcgtcctgcgctgagcaccagagcagcgggggccagtctgtcc
agcagccctgcactgctggctaagagaaccaagcaggagattaagctggcctacaagctg
gcgaagcgtttctactccaacccgccgcagtgggcgcgctgcctgttcagccactgctac
agcatgtggttcatctgcctgcctgcaggtgtgcgactggccaagtccaagagccgagcc
atgcagcaggcctacaacgtgctgctgaagatgagggccactgaggtggagattctggac
gaggtgtgctacagagtggtgatgcagctctgcggtgtgtggggtctccctgttatggct
gtgcgagtcctggtagagatgaaaaaagccggagttcatccgaacgccatcacatacgga
tactataacaaggccgtcctggaaagcccctggccgagtcgaaaccgcagcggcctcttc
atgtggaccaagctgcgtaacatcgttcgtggagtggcccagttcaagcaaatccaaaat
cacacatcgtccaagaagaagacgcccacgataacgaccacagctgcaccaggagaagag
tccggagccacagatgctgataatctgagccacggaagcgctcacagctccaatgaagtg
aacggcgaggagcacaacgaggacacagcagacggctgcaacacaggaagacagtctgac
caaggatacggttctaaggatgagctgcaccaggagctggcagagccttcacctacagaa
gagcattcagccggccagagaaactctgatgaaaagacccttaatggtggcgacattgca
ggctcagtggacagcgcagtggcagagccccttagtcctgttgatgtcccttcacccgtc
cccagcattgttaggctctccactggaagctttgatggtggcagggaaaccaaacctggg
aagctgttccggaatctcagtaagacggatagcgtgtcgctgccggatcccgacgcctcg
ctggcagtgggggacgccccgccaccgtcccagcatcagcggcagaaagccttcttggag
cgtagctgcagcttcagcgccgaaacccgtgctgggatgctcctggagaaaggtgtggac
cacatggccagccagatgggcgcagacgcccgcatcctggccgcagcgctctcggggact
cagagtccgccgccacacagcaagtccaaagcacttttcgaagacctggaggaagagtca
ggggacgataaaaacccttcaaaggaggaggctagaggagaagttaaagatgaggagaca
aaggtgaaggtcactgagatcaagaaggagaaaagagagaggaagcagacggagtcgcat
gaggatgagtccggagcgcgaggagccacactggagagggccgatgtgaaggcgggggcc
gacccgctctccctcatggtgtcggagaatgaagaatcagcgtccattagcagccaggat
cccccgcgctctgtgcctaccgttgtatcccgcaacctggccgaggaaatcgaaatgtac
atgagtctgaggagcccactggggtcgaagtcctccagcatggagctgcagcagggccag
ggagacgcccccgacgtaaatcagcccgaaaagcctctggagcggaggcccagcctcccc
gttcatccggtcaaaagcgccggcagctcgccggccgacacgcccaaacgcagcccgaaa
accgtcactcgctccaagacttttgctgtgaagatgaaaacatctgcgagcgctacagcg
agccccgcccctaaatcctcctcgctcacggcgctggttaagtcctcgcaggcgggatcg
ctgggatccgtcatcaacaccttttcaggcatcaaaatggactcattgctgtcaggagcc
aaaatcgatgtgctgaagtcgagcatgaagcacgcggcgaatgtgggcagtaaaatgtgg
ggggccatggcatcagcctttacttactcagatgacgaggatgagcagcctcagggcgcg
ggcggtttccctggcggtctggatgaacacatgttgtcttcacatgatttggccgagagt
cctgagaaaagaaccgtctccggtttggtcgctaatggccttaaccagagcagcaccagc
ttgggcagcagcagcggcagcagcgatacgggccgagggacgcagcagacgcatgtaact
ccagggcgcgcgggccggggccccgactctgagcaaagctcctcccaccacgcctcctcc
tccagcatctaccagaactgcgctctggaggtgctgatgtccagctgctcccagtgccac
tcctgcgaggctctggtgtacgacgaggagatcatggcaggctggacggcggacgactcc
aacctgaacaccaactgtccgttctgccggacagccttccttccgctgctgcatgtggaa
tttcacgacctccgcatgacccccgatttttatatgaatccgagtgcgtctggagaaagc
attcacagcaacaccgctcagcccacagccagcagcttggccgacataaagacacccgac
ctcatcactttctcagaggagacgaaggagacgccagacaatcgtcctgcagttcataag
agtctggttccggagccggtccagtcggaccccctgggcctcctggtgcacccggcagca
gggaagcaggagaaaagcagcgggacgtcgctgacgcgcagcaacagcgtcgggggtccg
ctgcagagcctggactacaccctgagacccggacacggcgtctccaccaccagcctgccc
tgcagcctgcacgaagtgtcggatgtcattggcaaaaaacgtccaaatcccaagccagtg
tccgtcccgtacctgagccctctggtcctgcgcaaggagctggagaccctgttggagaac
gaaggagaccaggtcatctacacccacaagttcctcagtcagcatccaattattttctgg
aacctagtgtggtacttccgccgcctggacctcccgtctcacctgccgggcctcatcctg
acttctgaacactgcaacaacggagtccagctccccctgacgtcgctgtctcaggatagt
aagcacgtcttcgtccagctgctgtgggacaacatcaacctgcatcaggaacccgaggaa
ccgctctacctcctctggaggaccttcttggagaaaaaggggactttagctccaacagat
catcaggagatccgaacccttctcaacaccatcgttagaaacatccagaccaacgacgtc
tacggtcccatcaacctgctgctgcgggagatcaaacgccgtccagacggcgtcaaacgg
caaaggagtatttacagagaaattctgtttctctcactggtggctttgggacgagagaac
attgacatagaggccttcgacagggagtaccggcaggcctacgaccagctgagcccggag
cagctcaagtctctgcaccgcatggaccgcccgcccagcgccagcatccagtggtgtctg
aaatgttttggcgcccctttcatttga
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