Xiphophorus hellerii (green swordtail): 116732720
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Entry
116732720 CDS
T07363
Name
(RefSeq) trichohyalin-like isoform X1
Organism
xhe
Xiphophorus hellerii (green swordtail)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIG1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
116732720
NCBI-ProteinID:
XP_032438951
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Position
14:10570619..10579212
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AA seq
2089 aa
AA seq
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MDSADENCSAAAEANGAYPVRCTEEVLLPFFTDESLPAAMNVQRPPVSPGTPPALQELRV
VLLGRKGAGKSAAGNTLLGGVGGFESGKPTEECVKRRADVVGRKVTVVDTPGWEWYYPLN
STPNWVRRETLRSVTLCPPGPHAVLLVVRSCASITDSYIQEIEEHLEPLGREVWEHTLVL
FTRGDELGLTTMEQRIQTSGSGLQRLLQKCSSRYHIVNNYSKGDGTQVKELIRKLEVMVD
RKKGGRSHLELDNGVLLGLEADGKRRARERRKKQRQMEAQMQRGTIKAALMSDGPQGSEL
DAHQSFSKAPRRLPEVRLVLLGERETGKSCAGNAILGKTGFFEAGAVTEECVRQQAEVAR
VMVTVVDTPGWEAGVAGATPERVKREIMCSVALCPPGPHALLLTLRVDTLVRAGHVREHL
ELLGEGVWRHTILLFTHGDQLREGVDIKQHVQSGGRDLQWLLEKCRGRYHVIGSGDGGGR
GSGGSAKVTELLEKVEKMATMNRCEAFSCVVQEVRDLSLQRNEKFNQRMKEIVDKMVRQE
AELKNLRDREVKSIRWFFDRKKKVKSPGKADVQREEEGDEDRRVGEIRNDFGDLEERMRW
LTEDREREIQDLSLENERIRVTLNQRQQEKHEAELNLELKEREIEELKERTDEQQLKLLD
LERTYVESEHERKRREDEIRAERQEWRKKLDEKEETVAVLEKEREEWIERFEALQVKMEQ
IETHYTDSLRKEGEKIRAMAEREEKLVKEMENQDKQLEGLRGKAAEEKQMMLENFNMLEK
STEELKLQHQKEMEEKETQIKDIKLRHEEEMTRKATESERIIETMRVQQKQEVHKTLKEK
TNDIELLKQLHEEGIKNMKQEQDKQVAQLNDKFAKEKSELLETKKRELAELKQAHLTQME
AKGQEGEKNKEMIQLQHKKELELHVQEKNTELEALKLKHQEEMATKINEMVKLMEEREVD
RKKEVGEIVKEKEEEVKRVRQEYTEILSKLEGERQREREELKQQIDEGEQEKQRWIKELK
EKFAAQTEETRRERASMTQDLQHSQRETEDVKCELIKQVEGRAAEKERHKKEFLQKEREV
EEMKEKFKELRETIQQKEEREKELFSEIEIRETDKERCKKESEQQIEEMKEKLNETKEKM
QQADERLKVLSNDMKAMEQQLKKKEDETEEMKLTVKEMKEEIREKEEKELVYLERKKDSE
QKLERTEQEAEKMKEQIKELEEDLQQAMEQREKDGLSKKKMQQTLEQNGRVIEKLQQHIK
DIDEILQRKDKEGGEIILNQKKEAEQRLQDTERRMEEMKQELLEDMESKLKEKEVENESI
KQQADSREARWREELKKTEERGANEINKLLEIIEKKTKEITQAERRLAEKEGEVDELKRL
CSNHCKDIDELRESNEKYTLRIAEMQQRHAEEEKKIEAQMMEKLQEKEEELKRLLQKDKD
NEKELVQLRLTIEQTKSELKELTERMEKEMTSMIREYEKEVKEKTENIEAVAKERESHEQ
SVRVVTEKYEESQKRVEELQEHNEKMRKETENLSIKCEEMRKKSEKEVREHLATCEAKIK
SIEAVLMERDAEVKALQEANDKLQGEVEVIKAREDRSKIQINELMEKQKEQAKKYDEECL
NREKLAEDRERAVRREEEELSKRRDDLSAKQEELVEMEIKLKNQESELQKLQANLEIREK
EAEEMDNQMTELNSRKQVIRKKERDLDTLLGALEGKQRELSSHGQDLQKKVRGLKDQGKE
LKDRECYLKNEEQELLNWKSELLVQNEYVNCTTQELDEIRRDMALLKEELRTRETKLKES
LKDMNKWELNLRKREEALVRGEQRSDDSIDETGSFHLLAEDNLPLMDQEVKDGRAKGRGK
ESAVEDTTSPTETNKCHFETLLETKQTEENKKISILRSLPNHKDPGCDLRVMVLGETWSS
RSPTGVTILGGEASKFSGSGFRPWRGQIAGRRLAVAEPLGLKWRDGPDATDSAQRKSILE
SVSWCRPGAHVVLLLVPAFLTCTRKYRRAMEEHVGLLGEDVWRRTLVLFTWGEILGESVD
QHILRNGELMGLIERCGGRYHVLTSKQNNSKIKALFEKMEDIADLSLEM
NT seq
6270 nt
NT seq
+upstream
nt +downstream
nt
atggactcggcagatgagaactgcagtgcagccgcagaggcaaacggagcttatccggta
cgatgcactgaggaagtacttctccctttcttcacagatgagagtttgccggctgccatg
aacgtccaacgccctccggtctccccgggcaccccgcccgccctccaagaactcagagtg
gtcctgctgggcagaaagggagccggcaagagtgccgcagggaacaccctgctgggagga
gtgggcggcttcgagagcgggaagcccacggaggagtgcgtgaaaaggcgagcggatgtc
gttggcaggaaagtcacagtggtggacacacctggctgggagtggtactacccactcaac
agtacccccaactgggtgaggagggagactctgaggagtgtgaccctgtgccctcctgga
ccccatgccgtgctcctggtagttcgctcctgcgcttccatcacagacagctacatccag
gagatagaggagcacctggagccgctgggaagggaggtgtgggagcacaccttggtgctt
ttcaccaggggagacgaactgggtctgaccaccatggagcagcgcatccagaccagcggt
tctggactccaaagactcctccagaagtgcagcagcaggtaccacatcgtgaacaactac
agcaaaggagacggtacgcaagtgaaggaactgataaggaagctggaggtgatggtggac
agaaagaagggaggaaggagtcatctggagctggataacggagtcctgctggggctggag
gcggacgggaagaggagagccagggagaggaggaagaagcagaggcagatggaggcgcag
atgcagagagggaccatcaaagccgctctcatgagtgatggaccccagggttcggagctg
gatgcacaccagtccttctccaaggctcctcggcggctgcccgaggtcagactggttcta
ctgggagagcgcgagactgggaagagctgtgccgggaacgccatccttgggaaaacaggc
ttcttcgaagcaggagcggtgacggaggagtgtgtccgccagcaggcggaggtggccagg
gtgatggtgaccgtggtggacacgccgggctgggaggcaggagtggccggtgccacgccg
gagcgggtcaaacgggagatcatgtgcagcgtggccctgtgccctccggggcctcacgcc
ctgctgctgactctgagggtggacactctggtgagggcgggacatgtcagggagcacctg
gagcttctcggagagggtgtgtggagacacacaatcctgctgttcacccacggcgaccag
ctccgcgagggcgtggacatcaagcagcacgtccagagcggaggcagggacctgcagtgg
ctgctggagaaatgcaggggtcggtaccacgtgatcggcagcggagacggaggaggacga
ggcagcggggggtccgcaaaggtgacggagctcctggagaaagtggagaagatggcgacg
atgaacagatgcgaagctttttcctgcgtggtgcaggaagttagggatttgagcctccag
aggaacgaaaagttcaaccagcggatgaaggagatcgtggacaagatggttcgtcaggag
gctgagttgaagaacttgagggacagggaggtgaagagcatcaggtggttctttgacagg
aagaagaaggtgaagtcgccgggaaaggccgatgttcaaagagaagaggagggcgacgag
gacagacgggttggtgaaataagaaacgactttggcgacctggaggagaggatgagatgg
ctgacggaggacagagagagggaaattcaggatctcagccttgaaaacgagaggatccga
gtcacactaaaccaacgtcaacaagagaaacacgaagcggagctgaacctggagctcaaa
gagagggagatcgaggaactgaaggaaaggactgacgagcagcagctgaagctcctcgat
ctcgaacgcacctacgttgagtccgaacacgagaggaagcgaagggaggatgaaatcaga
gcagagagacaggaatggaggaaaaaacttgatgagaaggaggaaactgtggcggtgctt
gaaaaggagagagaagagtggattgaacggtttgaagctttacaagtaaaaatggagcag
attgaaacacactatactgattctctaagaaaagaaggggagaaaatcagggcgatggca
gagagggaggaaaaactggtgaaagagatggaaaatcaagacaagcagctggaaggacta
agagggaaagctgcagaggaaaagcagatgatgcttgaaaactttaacatgttggaaaaa
agcacggaggagctgaaactacaacaccaaaaagaaatggaggagaaagaaactcagata
aaagatataaaactgcggcatgaagaagagatgaccagaaaagccactgagagcgaaaga
atcatagagacaatgagagttcagcagaaacaagaagttcataagacactaaaagaaaaa
acaaatgacattgagctactcaagcaactgcacgaggagggaattaaaaacatgaagcaa
gaacaagacaaacaagtagcacagttaaatgacaagtttgcaaaagagaaaagtgaactt
ttggagacaaaaaagagagagttagcagaactaaaacaagcacatcttactcagatggaa
gcaaaagggcaagaaggtgagaaaaacaaagagatgattcaactacagcacaaaaaagag
ctggaattacatgttcaagagaaaaacacagagctggaggccttgaagctgaaacaccaa
gaagaaatggctacaaaaataaatgagatggttaaactcatggaggaaagagaagttgac
cgcaagaaggaagtcggtgagatagtcaaagagaaggaagaggaagtcaaaagggttaga
caggaatacacagaaatactaagcaagctggagggagagagacagagagaaagagaggag
ctgaagcagcaaatagatgaaggagagcaagaaaaacagagatggataaaagagttaaaa
gaaaagtttgctgcccaaacagaagaaactaggcgagaacgggcaagcatgacgcaagat
ctgcagcacagtcaaagagaaaccgaagacgtcaaatgtgaactgataaagcaagttgaa
ggcagggcagcagagaaagaaaggcacaagaaagagtttctgcaaaaggagagagaggtt
gaggaaatgaaagagaaatttaaagaattgagagagacaatccaacagaaagaagaaaga
gagaaggagcttttcagtgaaattgaaatcagagaaacggacaaagaaagatgcaagaaa
gagtcggagcaacagatagaggaaatgaaggagaagctcaacgaaacgaaagagaagatg
cagcaagcagacgaaaggctgaaagtcctttcaaacgatatgaaagcaatggagcaacaa
ctaaaaaagaaagaggacgaaacagaggagatgaaattaactgttaaggaaatgaaggaa
gaaatcagagaaaaggaagagaaagaactcgtttacctggagcgtaaaaaagactcggag
cagaaactggagagaacagaacaagaagctgaaaagatgaaggagcaaataaaagagctc
gaggaagacttgcagcaggcaatggagcaaagagagaaagacggcttgagcaagaagaag
atgcagcaaactctggaacaaaacggcagagtgatagaaaagttgcaacagcacataaag
gacatcgacgagattctgcagagaaaggacaaggaggggggcgaaatcatcctgaaccag
aagaaggaggccgagcaacgcctgcaggacacagagcgaaggatggaggagatgaagcaa
gagcttctggaagacatggagagcaaactgaaagagaaggaggtggagaacgaaagcatc
aaacagcaggctgactccagggaggcaagatggagggaagagctgaagaagacggaggag
agaggggcaaacgagataaacaagcttctggagattatcgagaagaagacaaaagaaata
acacaagcagaaagacgtctcgcagagaaagagggagaggtcgacgagctgaaaagactg
tgctcaaaccactgcaaagacattgacgagttgagagagagcaatgaaaagtatacactt
cgtatagctgagatgcagcaacgccatgcagaggaagagaagaaaattgaggcacaaatg
atggaaaagctgcaggagaaagaagaagagctcaaacgtctgctgcaaaaggacaaagac
aacgagaaggagctcgtccagctgaggctgaccatcgagcagaccaaatcagagctgaag
gagctcaccgagagaatggagaaggagatgacgagcatgattcgggagtacgagaaagag
gtcaaagaaaaaacggagaacatagaggccgtcgcgaaggagagggagagtcacgagcaa
agcgttcgggtcgtcacagagaaatacgaggagagccaaaagagagtggaggagctgcaa
gagcacaacgaaaagatgagaaaagagacagaaaatctcagcatcaagtgtgaggagatg
aggaagaagagtgagaaagaggttagggagcatctagcaacatgtgaggcgaaaataaag
agcatagaagctgtccttatggagagagatgcagaggtgaaagcattacaagaagccaac
gataaacttcaaggagaggtggaagtgattaaagcaagggaagacaggagcaagattcag
ataaatgagctgatggagaaacaaaaagagcaggcaaagaagtatgacgaagaatgtcta
aacagagagaaattagccgaggacagagagcgagctgtgaggagagaggaagaagagttg
agcaaaagaagagacgacctcagtgcaaaacaggaggaacttgttgaaatggagataaag
ttgaaaaatcaagaatctgagcttcaaaaactccaagctaatctagagataagagaaaaa
gaagcagaggaaatggataatcaaatgacagagttgaactcaaggaagcaggttatcagg
aagaaggaaagggatctggacactttgcttggagcgctggagggcaagcagagagaactg
agctctcacggtcaagacctccagaagaaggtcagaggtctgaaggatcaagggaaggag
ctgaaggacagagagtgctacctaaagaatgaggagcaggagctgctcaactggaagtca
gaactgctggtgcaaaacgagtatgtcaactgcacaacgcaggagctggacgagattcgc
cgggatatggctttgctgaaggaggagctccgcaccagggagacaaagctaaaggagtcg
ctcaaagacatgaacaaatgggagctgaatctcagaaaacgagaggaagcgttggtcagg
ggggagcaaaggtccgatgacagcattgacgaaacgggttctttccatctactggctgaa
gataacttacctttgatggaccaagaagtcaaggatgggagggcaaagggaagagggaaa
gagtcagctgtagaagatactactagccccacagagacaaataaatgtcactttgaaaca
cttttagaaactaaacaaactgaagaaaacaagaagatcagcattttaaggtccctaccg
aaccacaaagacccagggtgtgacttgagagtgatggtcctgggagagacgtggtcttct
cgctccccaaccggagtcaccatcttaggcggagaggcgtctaagttcagcggatccggc
ttcaggccctggagaggtcagatagccgggaggcgcctggcggttgcagaaccgctgggt
ctgaagtggcgagacggacccgatgcgaccgattcggcgcaacggaagagcatcctagaa
agtgtctcctggtgccgcccgggcgctcatgtcgtcctcctgctcgtgcccgccttcctg
acctgcacgcggaagtacaggagggccatggaggagcacgtgggcttgctcggggaggac
gtctggaggcgtacgttggtgcttttcacctggggggagattctgggagagagcgtggat
cagcacatcctgaggaacggggaactgatggggctcatagagaggtgtgggggcagatac
catgtgctgacgagcaaacagaacaactcaaagatcaaggcgttatttgaaaaaatggaa
gatatagcagatttatctttagaaatgtga
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integrated database retrieval system