Xiphophorus hellerii (green swordtail): 116732770
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Entry
116732770 CDS
T07363
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116732770 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116732770 (taf6l)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116732770 (taf6l)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116732770 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
116732770 (taf6l)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116732770 (taf6l)
STAGA complex
116732770 (taf6l)
TFTC complex
116732770 (taf6l)
SAGA complex
116732770 (taf6l)
SLIK complex
116732770 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
116732770
NCBI-ProteinID:
XP_032439116
LinkDB
All DBs
Position
14:complement(1911074..1917892)
Genome browser
AA seq
639 aa
AA seq
DB search
MADREERRFAEVSRDSVKLMAESTGVDLADDVAALLAEDVCYRLREAAQTSSQFMRHAKR
RKLTVEDLNRALRWSRVEAVCGYGAQDALPFRSVKEGELFFVEDREINLIELALATNIPK
GCAETMVRVNVAYLDGKGNVEPQGTVPTAVQTLSDDLLKYYQQITRAILGDDPHLMKMAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKAVSLSQSAEGGSSCQLGSGAGSAGYRVGSPGLSPPSEPLSEAVLGIA
SHLQAGGAGCPWEEWSPVPLPAMYSELYSFFGDSLAVRFSTGPGFGSYPPCASACFREAR
KEQLGPAANTDTARKMPQLTANLNISPREDGSPRTDPPPPSLAATGAGRSLARSSSVQRS
RSSSSRSGQRSAGVSRDVFPKARFISPQSGPPAFSFVIGGRQMGRRCQGRRPFQTTFSLS
SSLPANPPRAYAHKLPVIGRVGKPVRRWTCSHYSLYLPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccgcgaggagcggcgctttgctgaggtttcccgggactccgtcaagctcatg
gcagagagcaccggcgtggatcttgctgatgatgtagcggctcttcttgctgaagatgtg
tgttaccgcctcagggaggcagcgcagacaagttcccagttcatgagacatgccaagagg
aggaagctgactgtggaggacttgaacagagccctgcgatggagccgtgtggaggccgtc
tgtggttatggggcgcaggacgctctgcctttccgatccgtcaaagagggagagctgttc
tttgtcgaggaccgtgaaattaacctgatagagctggccctggccaccaacattcccaaa
ggttgtgctgagaccatggtgagagttaatgtggcgtatctggatggcaaaggcaacgta
gagcctcaggggacagttcccaccgctgtgcagactctgtcagatgacctgctcaagtac
taccagcagatcaccagggccatcctgggagatgacccccacctcatgaagatggctctg
ctcgatcttcagtccaactcaaagattgctgctctgctgccatactttgtctatgtcatc
agtggagtcaaatcagtaagccacgacctggagcagctcaacaggctcctgcacatggtg
aagagcctggtccagaacccgtacctgtacctgggctcatacgtccgcagcctggtctcc
agcgtcatgtactgcatcctggagccactcgccgcctccatcaacccactcaatgaccac
tggaccctccgggactacgcagccctgctgctcagccacatcttctggactcacggtgat
ctagtgagtggtctctaccaccagatcctgctctctctccagaaggttctctctgaccca
gtcaggccactctgctcccattacggagcggttgtgggccttcacgctctgggttggaag
gctgtggaaagagttcttttcccacacctccctgcttactgggccaacctgcaggctgtg
ctggacgactactcagtgtccaacgcacaggtcaaagcagatggacacaaagtctatgga
gccatcctggtggcagtggagcgtctgctgaagatgaaggctgtgtctctgtcccagtca
gcagagggcggatccagctgccagctaggttctggagccgggtctgcagggtacagggtg
ggctccccaggcctcagtcctccgtcagagcctttgtcagaggccgttctggggattgcc
agccaccttcaagcaggcggcgcgggctgcccctgggaggagtggtccccagtccctctt
ccggcgatgtacagtgagctttactctttctttggggacagtctggccgtcaggtttagc
acaggaccagggtttgggagctatcccccctgcgcttcggcctgtttcagggaagcccgg
aaggagcagctaggcccagcagcaaacaccgacaccgcccggaaaatgccgcagctgacc
gccaacctcaacatcagcccacgagaggatgggagccctcgcaccgaccctccccctccg
agcctcgcagccacaggagcaggacggtctctggctcgctcctcctccgtgcagcgctcc
aggtcatcctcatcacgttcgggccaacgctctgccggtgtttctcgggatgttttcccc
aaggctcgtttcatttcgccacagtcaggacctccagcgttctcctttgtcattggtgga
cggcaaatgggtcgacggtgccagggccgccggccctttcagaccacgttttccttgtcc
tcctctctgcctgccaacccgccccgcgcctacgcccataagcttccagtaattggccgg
gtggggaaaccggtgcgtcgctggacgtgttcacattactcgctttacctgcctctgtag
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