Xiphophorus hellerii (green swordtail): 116732782
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Entry
116732782 CDS
T07363
Name
(RefSeq) structure-specific endonuclease subunit slx1-like isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116732782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116732782
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116732782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
zf-RING-like
PHD_NSD
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
116732782
NCBI-ProteinID:
XP_032439145
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Position
14:complement(1850523..1853386)
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AA seq
262 aa
AA seq
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MMVVEVESFFGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHKGGAKRTSGRGPWE
MVLIIHGFPSDIAALRFEWAWQHPHSSRRLSHVSRRSKRETSLQFHWRVVSNMLQVAPWS
RLPLTARWLRQEYRMDFDPGLQPPLHIPIAFGNVRAKKKQSLPSAGEDVMSVCFLCKAMV
KVSEKLSCFLPFCGMVSHVVCLARYFLRSEPSHLLPVEGQCPSCHGSVLWGSLIRHKHGC
LGDLEEIVSSTSQSHWADELQM
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgatggtagtggaggtggagagcttcttcggtgtgtacatgctttactgcactaaccca
aaatttaaaggccgtatctacatcggcttcacggtcaaccctgagcggcggattggacaa
cacaacgccgggaggcacaaagggggcgccaaaagaaccagtggcagggggccgtgggag
atggtactcattatccacggcttcccttcagatatagctgctctgaggtttgagtgggcg
tggcagcaccctcactcttccagacgactttcccacgtctcccgacgttccaaaagagaa
acgagcctgcagttccactggcgcgtcgtctccaacatgctgcaggtggcgccatggagc
aggctacctttgactgcccgctggctcagacaggagtataggatggactttgaccccggc
ctgcagcccccactgcacatccccatcgcctttggcaacgtgagggccaagaagaaacag
tcgctgccatctgcaggtgaagatgtgatgtctgtgtgtttcctttgcaaggcgatggta
aaggtgtcagagaagctgagctgtttccttccattctgtgggatggtcagtcatgtagtc
tgcctggccagatatttcctgaggtccgagccgtcccacctcctgcctgtagagggacag
tgtccttcctgccatggctcggtgttgtgggggagcctcattcgccataaacacggctgc
ctcggagacctggaggagatcgtttcctccacatcacagagccactgggcagatgaactg
cagatgtga
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