KEGG   Xiphophorus hellerii (green swordtail): 116732788
Entry
116732788         CDS       T07363                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116732788
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xhe01009]
    116732788
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xhe03021]
    116732788
Protein phosphatases and associated proteins [BR:xhe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116732788
Transcription machinery [BR:xhe03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     116732788
    Little elongation complex (LEC)
     116732788
SSDB
Motif
Pfam: ELL Occludin_ELL DUF4028
Other DBs
NCBI-GeneID: 116732788
NCBI-ProteinID: XP_032439157
LinkDB
Position
2:10336783..10367653
AA seq 602 aa
MAALRQEHRYGLSCGKINKNNPSQSLYHVKLTDTAIRTLEAFQNLKASLSNQPVICFKGS
QGYIKIPAPTTESPDGFRVFSFYLSSDSKDKPQSSFDCIHQFISGEGRDHLESQGSIQDK
ITVCATDDSYQTTRERMSQVEKDIWSRTAIEIKPGPSKCVKVQRKQGLVSSSDSSNKHSP
SNKRPLLPSPVAHRPLRDRIIHLLALKPYRKPDMLLWLERERASPKDKADLTSVLEEVGK
LNPKDSSYSLKDELYKLVQRDWPGYLEEEKQLIHRLLIRKLQPLHNNQSRSPQSNHSLHK
SLGDSPSRLSPAKNLSVKRSLVLDASNIQTPKKQRLSEHCLPLQSPSHTDCGTNGARNSS
SHGNACAATKTEFDITNNHPQGNPVGLYSPHKLSMPCAISKLDKTEPAPTLPSPKPRHNG
TSICTAQQLANGQHKKKRSKKHKDKERDRLKPDWIETSPDLKQNQENVKATDHERDKTPV
NRAATEELPDYFIKYSTVTTLEQRQQYHDDFCAEYDEYRALHDRIGAITEMFVQLGSKIN
TLTPGTQEYKLMEDQILQKYRKYKKKFPGYREEKKRCEYLHKKLSHIKGLIAEYDRTQGL
VS
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtggaaaaattaacaaaaac
aacccgagtcaaagtctttaccacgtcaaactcactgacacggccatccggaccctggaa
gccttccagaacctgaaggcttcactatcaaaccagccagtaatttgcttcaagggaagc
caggggtacataaagatcccagcaccgaccactgaatctccagatggattcagagtcttc
tcattttacctttccagtgacagcaaagacaagcctcagtccagctttgactgcattcac
cagtttatctcaggggagggcagggatcacttggaaagtcaggggagcattcaagacaag
atcactgtttgtgccacagacgactcttaccagaccacacgcgagcgcatgtcacaggtg
gagaaggacatctggagccgcactgcgattgagatcaagccaggaccaagtaagtgtgtg
aaggtgcaaaggaaacagggcctggtctccagctctgacagcagtaacaagcactccccc
agcaacaagaggcccctgctccccagcccggtggcacatcggcccttaagggatcgcatc
attcatctcctggccctaaagccctacaggaagcctgatatgctactatggctagagagg
gagagggccagcccaaaggacaaggctgatctgacctctgtactagaggaggttggtaag
ctgaatcctaaggatagcagctactctctaaaggatgaactttacaaacttgtccaaaga
gactggcctggatatctggaagaggaaaagcaacttatccacaggcttctcatcaggaaa
cttcagccactgcacaataaccaatcaaggagtccccagtccaaccattcgttgcacaaa
agtcttggggattctccctcacggctcagtcctgccaaaaatctctcagtgaaacggtca
ctggttttggacgcttccaacatccaaacccccaaaaaacaaaggctgtcggaacactgt
ctccccctgcagtcgccctctcacacagactgtggcaccaatggggctcgtaactcctcc
agtcacggaaacgcttgtgcggcgacaaaaacagagtttgacataaccaataatcatcct
cagggaaacccagttggtttgtattcgccacacaagctcagcatgccgtgtgctatttcc
aaactagacaagacggaaccggctcccactttacccagtcccaagcctcgacacaatggc
acctctatatgcactgcacagcagctcgccaatggccagcacaaaaagaaaaggtccaag
aaacacaaagacaaggagcgagatcgcttaaagccagactggattgagactagtccagac
ctgaagcagaaccaagaaaatgttaaagctacagaccacgaacgagacaaaacacctgtt
aaccgagccgcaactgaagaactgcccgactatttcataaaatacagcactgtaacaaca
ctggagcagcggcaacagtaccacgatgacttttgtgccgagtacgatgaatatagagct
cttcatgacagaattggggccatcacggagatgtttgttcagttgggctcaaagatcaac
actctcacaccgggaacacaggaatataagctcatggaggaccaaatactacaaaaatat
cgaaaatataagaaaaagtttcctggataccgggaagaaaagaaacggtgcgagtacctc
cacaaaaaactgtcgcatatcaaaggcctgatcgcagaatatgaccgaacacagggatta
gtttcctag

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