Xiphophorus hellerii (green swordtail): 116732833
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Entry
116732833 CDS
T07363
Symbol
chd2
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116732833 (chd2)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116732833 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
116732833
NCBI-ProteinID:
XP_032439237
LinkDB
All DBs
Position
2:10500241..10530493
Genome browser
AA seq
1813 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNRSASESGSQSESEHGSVRRRSHNSESNSSSE
SESRSESESESVGSKSQQATSEAKDKPVRKKERLADVKKMWEEHPDVYGVRRSNRSRQEP
ARLNIGAEGSSDSESESPKRKSSRTKKKENIWKDDDSIDEEEEEEKEETSDSSDSEQEEK
KVRSRRLPARRPQTKSSKKQQSQKGRKLRKQESSAEDDDDDDDDDDDDDEDDTPKRQTRR
RGATKIKSYKEDQHDFETDSDDLIEMTGDAGEEQQDDDSETIERVLDCRTGSKGATGAST
TVYAVEENGDPCEGFDPEKDEGETQYLIKWKGWSYIHNTWESIDSLTQQKVKGLKKLDNF
KKKNDELNSWLSKASPEDVEFHNCQQELTSDLTKQFQVVERVIATKTGKTPGSSDFPSHS
HKTPSSNEPEYLCKWMGLPYSECSWEDGALVRKKFQHCIDGFMSRNSSKTIPSKDCKVLK
QRPRFVALKKQPSYIGDENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISF
LSYLFHQHQLYGPFLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKTIRDYEWVNH
QTKRIRFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKSLMEFRSNHRL
LITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVK
KDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCC
NHSFLIKLPEEGDGETQLESLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDI
LAEYLTKKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTV
VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQR
MDTTGRTVLDNNSGNSNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIEEILRLA
ETRETDQGSSATDELLSQFKVANFSSMEDTTPEFEEKPIREWDDIIPEEQRRKIEEAEKQ
REMEDIFMLPRSRSSNKRAQANDSDSDVGSKLKQRSSGSDSETDDSDDDKKPKKRGRPRA
RKNNVEGFTDAEIRRFIKAYKKFGSPLERLEAIARDSELVDKSIADLKRLGELIHSSCVT
AVQEHEEQLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKVVPLNPAER
NKFILTCRVKVAHFDVEWDLQDDTQLLLGIYEHGFGNWDLIKTDPDLQLADKILPDDPNK
KPQGKQLQARAEYLLKLLKKEQDNAILSKSGEEVKVKKRKPRAKKEAKVLKDEQGNEISS
PRLSDNPSEEGEVKEEGAEKSPVKKRQKKKDNKENKEKQGTPKKEKDGDKEKKTAKPRKE
KAKAAKGKKTQGPVHITAGSEPVPIEGKEDDELDQETFSICKERMRPVKKALKQLDKPDE
GLSDQEQLQHTRTCLLKIGDRITECLKAYSDPEHVKIWRRNLWIFVSKFTEFSARKLHKL
YKMAQKKRSHDEEKEHKKKDDSSGRIKSFRPEPSGSSRDSTGMPSSKPAPLPSQSGTHGH
HREPYNAANKRHFGNNDRGDWPRDRKYGYQGNSNQPWQGDRHHPYDPHRYKDHYGDRRPH
GDAYRSSGGYRNNTSPRKRPYEQYGNDRDHRGHRPYYFRHPDNKRRRPDEFHPSYHQGRD
GPPQDFRRMPDHRAQGPPGPEHYNRPFHPDKPLPLMDPRSPQAQKSPQDSRSPLERPMDP
GLMADPNWNSRKT
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataaaaataaaaaacaagaggacgaaggatcgacccagagtaatgcttca
agcaattcagcttcagaggagtccaaccgttcggcgtccgagtctggaagtcagtcagaa
agcgagcatggcagtgtgaggaggcgatcgcacaactctgagtcaaacagctcctctgag
tcagagagccgctcagagtcagagagcgagtccgtcgggtccaaatcgcagcaagccact
tctgaggccaaagacaaaccagtcagaaagaaggaacgcctggctgatgtgaagaagatg
tgggaagaacacccagatgtgtacggcgtcaggaggtcgaatcggagcagacaggagcca
gctcgtctcaacatcggagctgagggcagcagtgactcggagagcgagagccctaaaaga
aaatcttctcgaacaaagaaaaaggaaaatatctggaaagatgatgactcaattgatgaa
gaggaggaggaggagaaggaggagacatccgacagttcagacagtgagcaggaagagaaa
aaagttagatccagacgacttcctgctagaaggcctcagaccaaatcatcaaaaaagcag
cagtctcaaaaaggaagaaagttgagaaaacaggaatcgtcagctgaagacgacgatgat
gacgacgacgacgatgacgacgacgatgaagacgatactccaaagagacagactcgaaga
agaggggccacaaaaattaagagctataaagaagatcagcatgacttcgaaaccgactct
gatgacctgatcgaaatgactggagatgctggtgaggagcagcaggacgacgacagcgaa
accatcgagagggttctcgattgcaggaccggcagcaaaggagccactggagcttccacc
actgtgtacgccgtggaggagaacggggacccgtgtgaaggtttcgatcccgagaaagat
gaaggagagactcagtatctgatcaagtggaagggctggtcctacatccacaacacctgg
gagagcatcgactcgctaacgcagcagaaggtcaaggggttgaagaaactggacaacttt
aagaagaaaaatgatgagttgaattcttggttaagtaaagcatctcctgaggatgtggag
tttcataactgccaacaggagctcacatctgacttgacgaagcagtttcaagttgtggag
cgagttattgcaacaaaaacaggaaagaccccaggttcctctgattttccctcccacagt
cacaagactccatcctcgaacgagccggagtacctgtgcaagtggatgggcttgccgtac
tctgagtgcagctgggaggacggcgccttggtcaggaagaagtttcagcactgcatcgac
ggcttcatgagccgaaactccagtaaaaccatcccgtctaaggactgcaaggtattaaag
caaaggccgaggtttgtcgccttaaagaaacagccatcatatattggtgatgagaacctt
gagctaagagattaccagctggacgggttgaactggctggctcactcctggtgcaggtgc
aacagcgtcatcctggccgatgagatggggctggggaagaccatccagaccatctccttc
ctgtcctacctgttccaccagcatcagctctacggaccctttctggtggtggtgcctctg
tccacgttgacctcctggcagagggagtttgacacctgggctccggacatgaacgtggtg
gtctacttgggcgacgtcatgagcaggaaaacgatccgtgactacgagtgggtgaaccat
cagaccaaaagaatccgtttcaacgccctcttaactacctatgagattctgcttaaagac
aagggcgtcctggggaatattaactgggccttcctgggtgtggatgaagctcacaggctg
aagaatgatgactccctgctctacaaatccttaatggagttcagatccaaccatagactc
ctcattaccggcactccgctacagaactccctcaaggagctctggtctctgttacacttc
ctaatgcccgacaagtttgactcctgggaggattttgaggatgaacatggaaaaggaagg
gacaacggttatcagagtctccacaaagtcctggagccattcctgctccgaagggtcaag
aaagacgtagagaaatctctacctgccaaagtggagcaaatcctccgcgttgacatgtcg
gcgcagcagaagcagttctacaagtggattttaacaagaaattacaaagccctttccaaa
ggcacccgtggcagctccagtggcttcctaaacattgtgatggagcttaaaaagtgctgc
aaccatagtttcctcattaagctgccagaggagggagacggagaaacgcagctggaaagc
ctccaggctttggtgaggggcagtggaaagctggtcctgctggacaaactgctgacccga
ctccgcgaacgaggcaacagagtcctgatcttctcccagatggtcaggatgttggacata
ctggccgaatatctcacaaagaagcgatacccttttcagcggctggacggttcaataaag
ggagaaatccgaaagcaggcactggaccactttaatgcagagggatcagaggacttctgc
ttcctgttgtccaccagagctggaggtttgggtattaacttggcctcggcagacactgtc
gtcatattcgactcagactggaaccctcagaacgacctgcaggcccaggccagagcccac
aggatcggacagaagaagcaggtgaatatatatcggctcgtcactaaaggaacagtggaa
gaggacatcatcgagagggcaaagaagaagatggttttggaccatctggtcattcagaga
atggacacgacaggtcgaacggttctggataacaactcaggaaactcaaattcaaacccc
ttcaataaggaagaactgactgctattctcaagtttggtgctgaagatctgttcaaagag
gcagagggagaggagtccgagccacaggagatggatatagaagagatcctgaggttggca
gaaacaagagaaacagatcaaggctccagcgctacagatgagcttctatcacagtttaag
gtcgccaacttctccagtatggaagacaccactccggagtttgaggagaagcccatacgg
gaatgggacgacatcattcctgaggagcagcggcgtaaaattgaggaggcggagaagcag
cgggagatggaagacatcttcatgctgcccaggagcaggagctccaacaagagggctcaa
gccaatgacagcgacagcgatgtgggctcgaagctgaagcagcgctcatctggctcagac
agcgagacggatgacagcgacgacgacaagaagccaaagaaaagaggcagacctcgagct
cgcaaaaacaacgtggagggcttcaccgatgcagaaatccgcagattcattaaagcctat
aagaagtttggatcgccactggagagactggaagccatcgcccgagactctgagttggtg
gacaaatccatcgcagacctcaagaggctgggcgaactgattcactccagctgcgtgacg
gccgtgcaggaacacgaggaacagctcaaagagaacccagttgaagccaaaggtcctggg
aaacgcagaggaatcaacattaagatttcaggagttcaggtcaatgccaagtcaatcatc
cagcacgaggaggagtttgagccgcttcacaaagtcgtgccccttaaccccgctgagagg
aacaagttcatactgacttgcagggttaaagtcgcccacttcgatgtggagtgggatctg
caggacgacactcagcttctactgggcatctacgagcacggctttggaaactgggatctg
ataaagacagatcccgacctgcaactggctgataagattcttccagacgacccaaacaag
aagcctcagggcaagcagttgcaggcgagagctgagtatttgctcaagctgcttaagaaa
gagcaagacaacgcgattctgtctaaatccggagaggaggttaaggtgaagaagaggaag
ccccgagctaagaaggaagccaaggttctcaaagacgagcagggcaacgagatctcgtcc
cctcggctgtccgataacccgtcagaggaaggagaggtcaaggaagagggagcggagaag
tctcctgtgaagaagaggcaaaagaaaaaagataacaaggaaaacaaagaaaaacaggga
acacctaaaaaagagaaagatggagacaaggaaaagaaaaccgccaagcccagaaaggag
aaggctaaggcagccaaagggaagaagactcaaggtccagttcacatcacggccggttcc
gagcccgttcccatcgaaggaaaggaggacgacgagctcgaccaggaaacctttagtatt
tgtaaggagcgcatgcggccggtgaagaaggccctcaagcaactggacaaacccgatgaa
ggactgtccgaccaggagcagctccagcacacacgcacatgcctgctgaagatcggagac
cgaatcacagagtgccttaaagcgtacagcgaccccgaacatgtcaaaatatggcgcagg
aatctctggatttttgtctcaaagtttacagagttcagtgccagaaagctgcacaagctt
tacaaaatggctcaaaagaagcgatcgcatgatgaagagaaggagcacaagaagaaggac
gattcctcagggaggataaaatccttcagaccagaaccttcggggtccagtcgagactcc
accggcatgccgtcctccaaacccgctcctctcccgagccaatcaggaacacacggacac
cacagggaaccatacaacgctgctaacaaacgacactttggcaacaacgatcgaggagac
tggccgagggaccgtaaatacggttaccaaggaaacagcaatcagccttggcagggagac
cgccaccatccatacgaccctcatcgttacaaggatcactacggagatcgacgtccccac
ggagacgcgtatcgaagctcaggaggttaccgtaacaacacctctcctcgaaaaaggccg
tatgagcagtacggcaacgacagggaccacaggggacatcggccctattatttcaggcac
ccggacaacaaacggagacgccccgatgagttccaccccagttaccaccagggcagggac
ggccctcctcaggacttcaggaggatgccggatcacagagcacagggtccgccggggccg
gagcattacaaccggcccttccacccagacaaacccctcccgctgatggacccccgctcc
ccgcaggctcagaagtctccgcaggactcccgctccccgctggaacgccccatggatccc
ggccttatggcggatccaaactggaacagcaggaaaacatag
DBGET
integrated database retrieval system
