Xiphophorus hellerii (green swordtail): 116732842
Help
Entry
116732842 CDS
T07363
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116732842 (sorcs2)
Membrane trafficking [BR:
xhe04131
]
Protein recycling
Others
Others
116732842 (sorcs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
BiPBP_C
DUF2769
Motif
Other DBs
NCBI-GeneID:
116732842
NCBI-ProteinID:
XP_032439256
LinkDB
All DBs
Position
14:5179202..5487372
Genome browser
AA seq
1111 aa
AA seq
DB search
MGTLRPERAAAASLCIFLLTAAAVWTALPGAVQGDSGSFSRRGGSGEDRTSDAGGGGGGE
PRARRAVSWDKRMSLLSSSFVLKGDATHNQAMVHWTGENSSVILILTKYYHADSTKVLES
SLWRSTDYGTTYTKLNLIPGTTIVVTSFYICPTNKKKVVMVGSSINERDQMLFISTDEGS
SFQRQAVAFTPETVIFHPKEEDKLLAYCKDGRLFASTDLGRKWTLLQERVTKDRIFWSVS
GVDLDPDLVHMEMQDSSGGHLYVTCLIQNCSDKMLTAQFLGRIDHNSLLVQDDYIFVKVT
TGNRTKHYVSYRRNEFVQMRFPKYALPKDVQIVSTDESQVFLALQEWYQSDTYNLYQSDS
QGVYYSMILENVRSTKQPEESVLIDILEVRGVKGVFLANQKVDGKVTTLITFNKGRTWEP
LAPPATDMNGKPVSCKVPDCHLHLHLRWADNPYVSGTVHTKDSAPGLIMGAGNLGSKLVE
YKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILKFSIDEGRTWNIH
NFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQSFPRQCTELDYESWQL
TDLQGEKCIMGRERTFRKRKDSAFCMKGKSYTSALTATPCQCTDSDFICDYGFERSYTEG
DRCFPDFWFDPESPPESCHLGQNYQSSTGYRKVISNSCEGGLDKQQSAKQHSCPLLPPKG
LKVSIKGQMLAVAPGDDITFIVHQEQGDTSSTRYQVDLGDGVRTIYQNLTVTDEPIQHRY
EKPGVYKVTVKAENIAGHDEATMYIQVTEPLQEVHLEAVPIARRNHVVNLTAIVLPTTAN
LTVFYWWLGDGPKPKLTLQNSLLTRFPESGEVSVTVQASNGRSMVQDTKIVRVYDNFQVI
PLSFSRNLDRFNPNIPEWRDDVGQVVTKLLAKTTGVPQDSLVTVVNPGLPTTADLYVLPL
DSKPAKGSVLVDKRIPAVVQAVSDKNISFMVRGGLRVLVMLADPNAGYHGAAGGPGVWAL
AVIFLISVVGTGSFILYKFKRKLPGNRNIYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEF
IDDDLDSQTLGNHSGVILSINSRELHGYLSS
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgggaactctgcgcccggaacgagcggccgccgcgagcctctgcatcttcctgctgacc
gccgcggcggtgtggacggcgctgcccggagccgtgcagggggacagcgggtcttttagc
cggcgcggcggtagcggggaggatcggacgtctgacgcgggcggcggcggtggcggggag
ccccgcgccaggagagccgtgtcctgggataaacggatgtccctgctcagcagctcgttt
gtgctgaaaggagatgcgacgcacaaccaggcgatggtccactggacgggagagaacagc
agcgtcatcctgatcctgaccaagtattaccatgccgactcaaccaaggtgttggagagt
tcgttgtggaggtccactgattatgggacgacctacaccaaactcaacctgatcccaggg
acaaccatcgtggtgaccagtttctacatctgtccaaccaacaagaagaaggtggtcatg
gtgggctcgtccatcaacgaacgagatcagatgctcttcatcagcacagacgagggctcc
tccttccaacggcaggcggtcgccttcacaccagagaccgtcatcttccacccaaaggag
gaagacaagctgctggcgtactgcaaggacggacggctcttcgcttcaaccgatctgggc
cgcaagtggactttacttcaagagagggtgaccaaggacagaatattctggtctgtgtct
ggtgtggatttggaccctgatctggtgcacatggaaatgcaagattcaagtggaggccac
ctctacgttacctgcctcatccagaactgttcggacaaaatgctgaccgcccagtttctg
ggtagaattgatcacaattcgctgctggtgcaagacgactacatatttgtaaaggtcaca
acaggtaaccgcaccaagcactatgtgtcctatcggcgcaatgagttcgtccagatgagg
tttcccaagtatgccctgccgaaggatgttcagatagtgagcacagacgagagccaggtg
ttcctggccctccaggagtggtaccagtcggacacgtacaacctgtaccagtcggactcg
cagggcgtctactactccatgatcctggagaacgtccgcagcaccaagcagccggaggag
agcgtcctcatcgacatcctggaggtgcgtggggtgaaaggcgtcttccttgccaatcag
aaggtcgacggaaaagtgacgactctcatcaccttcaacaaggggcggacctgggaaccc
ctggccccgcccgccacggacatgaacggcaagccagtcagctgcaaagtaccggattgc
cacctccacctccacctgcgctgggccgacaatccctacgtctctggcaccgtccacact
aaagactcggctccgggcctcatcatgggcgctggtaaccttggctccaaactcgtagag
tataaggaggagatgtacatcacttcagactgtgggaagacatggagacaggtgtttgaa
gaggagcatcacatcctgtatctggaccatggtggagtcattgttgccatcaaggacact
tctattcccctcaagatactgaagttcagcattgatgaaggcagaacctggaacattcac
aacttcaccagcacgtctgtgttcgtcgacggactcctgagcgaaccaggagacgaaact
ctggttatgactgtgtttggccacatcagctacaggtcggactgggagctggtcaaagtg
gacttcaggcagtctttcccccgtcagtgcactgagttggattatgagtcctggcagctc
acagacctgcagggggaaaagtgcattatgggacgagagcggaccttcaggaagcggaag
gacagcgcgttctgcatgaaaggaaagagctacacctcggctctcaccgccacgccctgc
cagtgcaccgacagcgacttcatctgtgattacggctttgagcgctcctacacggagggc
gatcgatgcttcccggacttctggtttgatcccgaatctcccccagagagctgccacctc
ggacaaaactaccagtctagcactggctacaggaaggtgatatcgaactcttgcgaggga
ggcctcgacaaacagcagagcgccaaacagcacagctgtcctctgctgccccctaaaggt
ctgaaggtcagcattaaaggccagatgctggccgtggcccctggcgatgacatcacgttc
atcgtccaccaggagcagggcgacacgagcagcaccaggtatcaggtggacctcggcgac
ggcgttcgaacaatttaccagaacctgacggtgaccgacgagcccatccagcaccgctac
gaaaagcccggcgtttacaaggtgacggtgaaggcggagaacattgcgggacatgacgag
gccaccatgtacatccaggtcacagagcctctgcaggaagttcacctggaagcggttccc
attgccaggagaaaccatgtagtcaacctgacggccatagttcttcccactacagccaac
ctgaccgtcttctactggtggctcggcgacggccctaagcccaaactgaccctccagaac
agccttttgacccgtttccccgagagcggagaggtttccgtcaccgtccaggcgtccaac
ggccgatccatggtgcaggacacaaagatcgtcagagtctatgacaacttccaagtcatc
ccgctgagcttcagcaggaacctggaccgtttcaaccccaacatcccggagtggagggac
gacgtcggccaggtggtcaccaagctcctagccaagaccacaggcgtacctcaggactct
ctggttaccgtggtgaacccaggcctccccacgacggccgacctgtacgtgttgccgctg
gactccaaaccagccaagggcagcgtattagtagataagcgtatcccagcggtggttcaa
gcggtcagcgacaagaacatcagcttcatggtccgaggcggtctgcgggtgttggtgatg
ttggccgacccgaacgcaggctaccacggagcagccggaggtccaggtgtctgggcgctg
gctgtcatattcctaataagcgtcgttggcactggctcgttcattctgtacaagtttaaa
agaaagctccccggcaaccgcaacatctacgcccagatgcacaacgagaaggagcaggag
atgaccagccccgtcaaccacagcgaggacacgcagcacatcatccagggcgaggagttc
atcgacgacgacctggactcgcagactctaggcaaccactcgggtgtgatcctgagcatc
aactccagagaattacacggttacctgagcagctga
DBGET
integrated database retrieval system
