Xiphophorus hellerii (green swordtail): 116732870
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Entry
116732870 CDS
T07363
Name
(RefSeq) fibrinogen alpha chain-like
KO
K03903
fibrinogen alpha chain
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04517
IgSF CAM signaling
xhe04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116732870
04518 Integrin signaling
116732870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116732870
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116732870
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116732870
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116732870
Hyaluronan
Extracellular matrix or blood plasma proteins
116732870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
CSNKA2IP
DUF4407
UPF0242
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
116732870
NCBI-ProteinID:
XP_032439316
LinkDB
All DBs
Position
14:complement(26675934..26683213)
Genome browser
AA seq
677 aa
AA seq
DB search
MKKLSLLLCLVSVAITQATLLDPRGARPVEPATRDQKCATQREWPFCTDDDWYSKCPSGC
RIQGLMDKNDHELLKKIAKIRSLLDQHKARHRSVDLVSKQTYDILTEKLTLDTGNDNMYY
NLAQTLRQRITEMKVRIDRQHKALAALKARVKDQVVEMQKLEIDIDIKLRSCKGSCGAHT
VYQVDRDSYVALDKQVNQLDAQVAQSVDTVGTLYVMKSRPLQDVIVDSRFKSKDVAAQRT
ADLFPQVNTVQFILEEEGSSSSPATVSKVPGTSHSTSPSSSSSSSSSSSSSSGSPSKSIT
ELSGRGDGDFFSDFDGTGLQGQPSVSMSTKTVSCTKTIRRTVVHTKDGPVERVEEVGGGP
GCDGMGGLTKGGLGSLFPTLTGSSSSSSSSSSSSFHSGGSKGSILADSKSGMNPFGADFG
AFMTDNAEDDIPDFHARSVKSTVVERQADFVGTDCVDAYQKHLKGEANGLFRIKPAGSAA
AVEVYCHQEGIMGGWLLVQQRESGSISFNRTWAEYRDGFGSVDALGKGEFWLGNQNLHLL
TNQGETMLKVELEDWEGGVATAEYTVRVGTEDEGFPLQASGYTGDAGDALASHSGVKFST
FDKDNDGSGENCAEAYGGGWWYNSCQAANLNGIYYKGTYDPETNTPYKTANGVVWPTFKP
ATYSLKAARMFLRPASF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctcagtttgctgctctgcctggtttctgtggccataacacaggctacgttg
ttggacccaagaggagcccgtccggtggaaccggccaccagagaccagaaatgtgccacc
cagagagagtggcctttctgcacggacgacgactggtactcaaaatgcccgtcaggctgc
aggattcagggcctgatggataaaaacgaccatgagcttctgaagaagatcgcaaagatc
cgcagcctgctggatcagcacaaggcccgacatcgctccgtggacctggtgtccaagcag
acctacgacatcctgacggagaaactcaccctggacaccggaaatgacaacatgtactac
aacctggcccagacgctgcgtcagcggatcactgaaatgaaggtccggatcgacaggcag
cacaaagcgctggccgcgctgaaggctcgggtcaaagaccaggtggtggaaatgcagaaa
ctggagatcgatattgacattaagctgcgctcctgcaagggatcctgcggcgctcacacc
gtgtaccaggtggaccgggacagctacgtggctctggacaaacaggtgaaccagctggac
gcccaggtggcccagagcgtggacacggtggggacgctgtacgtcatgaagagccggccg
ctgcaggacgtgattgtcgactccaggttcaaatccaaggatgtggcggctcagcggacg
gcggacttgttcccccaggtgaatactgttcagttcatcctggaggaggaaggctccagc
tcatctccggccaccgtctccaaggtcccaggtacttcccactcaacgtctccctcctca
tcctcatcctcatcctcatcctcatcctcctcttctggatcaccgtctaaatccatcacg
gagctctcaggacgcggcgacggcgattttttcagcgacttcgacggcacaggactccag
ggccagcccagcgtcagcatgagcaccaaaaccgtcagctgcaccaaaaccatcaggagg
acggtcgtccacaccaaagacgggccggtggagcgggtggaggaagtgggcggcggaccc
ggatgtgacgggatgggtggcttgacaaagggtggcctgggctccttgttcccaacgctc
accggctcatcctcctcatcctcctcatcctcctcttcatccttccactccggtggatcc
aagggaagcatattggcagattctaaatccgggatgaacccgttcggagccgacttcggc
gcgttcatgaccgacaacgcagaggacgacattcctgatttccatgctcgcagtgtgaag
agcacggttgtggaacggcaggcggactttgtaggaacagattgcgtcgacgcctaccag
aagcacctgaaaggtgaagcgaacggtctttttaggatcaaacctgccggctccgcggcg
gccgtggaagtctactgccaccaggagggcataatgggcgggtggttgttagtccagcag
agagaaagcggctccatcagcttcaaccgcacctgggccgagtaccgtgacggcttcggc
tcggtggatgctctggggaagggggagttctggctgggcaaccagaacctccacctgctg
accaaccagggggagaccatgctgaaggtggagctggaggattgggaggggggcgtagcc
acggctgagtacacggttagggtgggcaccgaggacgagggcttccccctgcaggcgtcc
gggtacaccggagacgccggggacgctctggcgtcccacagcggcgtcaagttcagcacc
ttcgacaaagacaacgacgggtcgggggagaactgtgcggaggcgtacggcggcgggtgg
tggtacaacagctgccaggcggcgaacttaaacgggatttattacaaaggaacatacgac
ccagaaacaaacacaccttacaaaactgcgaatggcgtagtgtggcccacttttaaaccg
gccacttacagcctgaaggcggcgcggatgttcctccgaccagcctccttttga
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