Xiphophorus hellerii (green swordtail): 116732885
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Entry
116732885 CDS
T07363
Symbol
nwd2
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116732885 (nwd2)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
116732885 (nwd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_NWD2_C
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WHD_NWD1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
NPHP3_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_ACSF4
AAA_16
AAA_22
Beta-prop_TEP1_2nd
NACHT
Tricorn_2nd
PQQ_2
AAA
AAA_28
Beta-prop_Aladin
NPHP3
TniB
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
116732885
NCBI-ProteinID:
XP_032439348
LinkDB
All DBs
Position
14:13042816..13087092
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AA seq
1744 aa
AA seq
DB search
MKRMNPRWKSPPMWPSGVGSRQPCPRESALRRAAISGNINALPPHHVPTGRSVRVFICAN
PDDTEAERNALKEHVYPKLRDFCRENYGIEFQVVDLYWGVDPEEWDNPDLQRLRMKLLEE
CLKTSAGPCFVGLVGEKYGSIRVPGEVESAEFEMILDAAVEAGLDTHILEEWYCRDENSV
PPAYYLKPKAQMLKNYQNSMESSSAAKTKNDKAWRNVSEEIKRIFRTAVLQLQEKGTMKS
ADANKFLCSALEDELDFALGKQTPAFLRKCVCYIRKISNFDRFAKLPEMTRYMDIVVSAD
RVMRNQEAYERLLKVRDEFIPTIVAASNLRVYSSVTHCDMKLGYSQEVESHYVEGLCKQF
YEDMVDIIQATVQQNFDTETDPLYDEILQHLSLCKTYATLYKYKSETLDYVQEYLMPSKG
SRMSPLVVYGGPCTGKTLLLSEVAKQAYTWLQKEMGPETDPVVIVRFIGSSQLSTDLRTL
LQSICEQIAINYRCLIHFLPNKIQEMRELLINLLGESSFHRPLVIILDAMEQLSDADEAR
KLWWLPVHLPRTVRIVVSTLPNKHGILQKLRHLIHDETYYVELIQRDRKVCSQMLKQQLL
GVKRKVTSGQQIYVNEALAKCTLPMFVNLIYREVVHWRSHKDVDDKSLCSTVHESIEQLF
YSVENKLGQRFVFRALGYVTMAKAGLTEVELEDILSLDNIVLGDVIVPSYLKNPLRISYD
LLAKLKEELEGYLVERQVRNVTLMVWANRHLHLIAQKLYLSNEEDVHQMHSLLAEYFLGA
WSGGRKKIFTYDNNHFTSLNISHHKNPHHQQSHEKTSSDKYSYDRQTPEQPWVFQCNLLE
PDIFFVNHRKMTELVYHLTRSGRTDDLMFGVIMNFSWLYTMIKIGQFDKAITDIDLAYTC
SQEKELKFLATTLRSIKVKVLKNPASLSAELQQRLLPVVTSLPKLRHLLLECDKDGPKYC
SIVPLHSSMDVTYSPERLPLCSSYIQIVEILPTLAPNIVLVALEDGSISTWDVESRQLLR
QIDTARSVVLGIRLTTDEKYLVVATTKNTLLIYDNHKSCLLSEVEIKGSKHSGVAGGVAF
INGFTLSTHHALAWLEASKDVSVIDLVYGWPLYQFHCWYEVTCVQCSPDGMYAFCGQYLN
TTSVFHLGNGEKLSTVTSEFSGGFVKSILVLDTLNQMVMIDNEGSLSVWNTKEITNPKLM
EDYDCRGDESEVVGIELSEDQRSILICKASSIEVLDTKVWKMLEKFKAKRSERFVAAVLS
KNGQSIVASMENTSSIFVWRRDSGQCMASLIEISGAIVKLIKSAHHNLLLSVASSGVLSV
WDIDIITAMSNIDKTGKKIQTLQLTGREDYVFTMDGSEAVHKWNFSTGFIETVFKHEGMV
ENCVLTSSGDLMVTSDDKSSQYIWQTNTGENIFRINGQRISQLLITHNDQFVVSLCEQNA
SRVWRLATGHKVCNILVSLQNALITTANTFLVGTSKNKLLAVSLWSGSVSKKFVCDDGIT
IVNFKLIPDCPDCAVFITSTETVFIWSVADESVCRRVQLPANFLKNLEDFQISPNGKLGI
VSKGDENINVLDLHSGKLRLVHAAGIIWRQKLSRDGRYLVYVCFRNCDEDDEAGVVSNLI
VMRLADGKSIGTCSLYKTPTFLSLSQRALNIIIGFEDGSIGTYTVVDRVDAALKIKIATS
NSRQIVNNASQKVRPKCGNHSFKTVADCIWRESTEVFSRDSPINVSDSGEGESTTPTKKT
ELLQ
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaatgaacccacgctggaagtcgcctcccatgtggccatcgggagtggggagc
aggcagccgtgcccgcgggagtcggcgctgcgcagggcggccatcagcggcaacatcaac
gccctgccgccgcaccatgtccccaccggccgcagcgtccgggtcttcatctgcgccaac
cccgatgacacagaagcagagaggaatgcactgaaagagcacgtctaccctaaactgcga
gacttctgcagggagaactacgggattgaattccaggtggtggacctgtactggggagtt
gatccagaggagtgggacaatccagacctgcagagactccgaatgaaacttctggaagaa
tgtctgaagacatcagccgggccatgctttgttggtctggtgggtgaaaagtacggcagc
atccgagtgccgggcgaggtggagtcggcggagtttgagatgatcctggacgcggctgtg
gaggcggggctggacacccacattttggaggagtggtactgcagggatgaaaactctgtg
ccacccgcatactacctcaaacccaaagcccaaatgctcaagaactaccagaactctatg
gagtcgagcagcgcagcaaagaccaagaatgacaaggcctggaggaatgtgtcagaggag
atcaagaggatcttccggacggcggtgctgcagctgcaagagaaaggaaccatgaagagt
gcggacgccaacaaattcctttgctctgctttggaggatgaattggactttgccctcggg
aaacaaacacccgccttcctcaggaaatgcgtctgctacatacgcaagatctctaacttc
gaccgcttcgccaagctccctgagatgacccgctacatggacatcgtggtgagcgccgac
cgtgtcatgcgcaaccaggaggcctacgagcgcctcttgaaggtgcgcgacgagttcatc
cccaccatcgtggccgcctccaacctccgcgtctactcttcggtcactcactgcgacatg
aagctgggctactcccaggaggtggagagccactacgtggaaggtctctgcaagcagttc
tacgaggacatggtggacatcatccaggccaccgtgcagcagaactttgacacagagacc
gacccactgtatgatgagattttgcagcacctgtccctgtgtaagacctacgcgaccctc
tataagtacaagtcagagactctggattacgtgcaggagtacctcatgccgtctaaaggg
agcaggatgagccctctggtggtgtacggagggccctgcaccggaaagacgctgctgctg
tccgaagtggccaagcaggcctacacatggcttcaaaaagagatgggtccagaaacagat
ccagtggtcatcgtccgatttattggctccagccagctctccactgatctacgaactctt
ctccagagcatctgtgagcagattgcaataaactaccgctgcctgattcacttcttgcct
aacaagattcaggagatgagggagcttctaatcaacctccttggggagtcatccttccac
aggcccctggtcattatcctggatgccatggagcaactttctgatgctgacgaggcgcgt
aagctgtggtggcttcccgtacacctgcctcgcaccgtccgcatagttgtatcaacactg
cccaacaaacatggtattctgcagaagctgcgtcatctcattcatgatgagacgtactat
gtggagttaatacagcgagaccgaaaggtctgcagccaaatgttaaaacagcagctgctt
ggggtgaagaggaaagtaacatcaggccaacagatctatgtgaatgaggcacttgccaag
tgtactttgcccatgtttgtcaacctcatctacagagaagtagttcattggaggtctcac
aaagatgtcgacgataaatccctgtgctcaacagtacacgaaagcattgagcaactcttc
tactctgtggagaacaagctaggccaacgatttgtcttcagggcattaggatatgtcacc
atggcaaaggcagggctaacggaggttgagttagaagacatcctatctcttgataacatt
gttcttggagacgtcatagtaccaagttaccttaaaaatccactaaggatttcctacgac
ctacttgctaaactcaaagaagagctggaaggctatctggttgagcggcaggtaagaaac
gtcacactgatggtctgggccaacaggcacctacatctcatcgcccagaagctctacctc
agcaatgaggaggatgtacatcaaatgcacagcctcttggctgagtacttccttggagca
tggtcaggaggcaggaaaaagatctttacctatgacaataaccatttcacttccctgaat
atttcacatcacaaaaaccctcatcatcaacagtcacatgaaaaaacatcctctgataaa
tactcatacgacagacagactcctgaacagccttgggtgttccagtgcaacctgctggag
cctgacatcttcttcgtcaatcacagaaagatgacagagctggtgtaccacctgaccagg
agtggccggacagacgatctcatgtttggtgtcattatgaacttcagctggctttacaca
atgatcaagattggtcagtttgataaagctataacagatattgatcttgcttatacttgc
agccaagaaaaggagttaaaatttctggccaccactcttcgtagcattaaggtaaaagta
ctaaagaatcctgcatcactgtctgcagaactgcagcaaaggcttctgccagttgtcacc
tccctgcctaaactcagacaccttctcctggagtgtgacaaagatggtcccaagtactgc
tctattgtgcctctccactcctccatggacgtaacctacagtccagagagacttcctctt
tgctccagctacatacagattgtggagattttacccactctagccccaaacatagtcctt
gtagcactggaagatggatctatcagcacctgggatgtagaaagcaggcagctccttcgg
cagattgacacagccagatctgttgtgctgggaatcaggctaaccaccgatgagaagtac
ctggtggttgccacaaccaaaaatactctgctcatctatgataatcacaaatcctgcctc
ttatcagaggttgaaattaaagggtcaaagcacagtggtgttgctggaggagttgctttc
ataaacggttttactctttctacccaccatgcacttgcatggcttgaggctagtaaggat
gtcagtgttattgaccttgtgtacggctggcccctctaccagttccattgctggtatgaa
gtaacctgtgtccaatgctcaccagatggcatgtatgccttttgtggccagtacctgaac
acaacatcagtctttcatctaggaaatggagaaaagttgtccactgtgacatcagagttc
tctggggggtttgtcaagtctatcctagtactggacactcttaaccaaatggtaatgatt
gacaatgagggaagtctgtcagtgtggaacaccaaagagataaccaacccgaagctgatg
gaggattatgattgcaggggggatgaaagtgaagttgtgggtattgaattatctgaagat
cagcgttccattctcatttgcaaggccagtagtattgaggttctggatacaaaagtatgg
aaaatgctggagaaattcaaagctaaacgtagtgagcgatttgttgctgctgttctctcc
aaaaatggacaaagcattgttgcctcaatggagaatacttcatctatttttgtctggagg
agagacagcgggcagtgcatggccagcctgattgagatctcaggagctattgtgaaactc
atcaaatcagcccaccacaacctgcttctttctgtagccagcagtggcgttttgtctgtc
tgggacattgatataatcacagccatgtctaacatcgataaaacaggcaagaagatccag
acattacagctgactgggcgagaggactatgtattcaccatggacggctcagaggcagtc
cacaagtggaactttagcaccgggtttattgagacggtcttcaaacacgagggcatggtg
gagaactgtgtcctaacctcctcaggggatctcatggtgacttcggacgacaagtccagt
cagtatatctggcaaaccaacaccggagaaaacatcttccgcataaacggacagagaatc
tcacagctgctgatcacccacaatgaccagtttgtggtttctctctgtgagcagaatgcc
tcaagagtctggagactggctactgggcacaaagtctgcaacattttagtcagcctccag
aatgcacttatcactacagcaaacacttttctggtgggcacttccaagaataaactgctt
gctgtgagtctgtggtcaggcagcgtatccaagaaatttgtctgcgatgatggcattacc
attgtcaacttcaagctcattccagactgtccagattgtgcggtctttatcacgtccaca
gaaacggtcttcatctggagtgtggcggatgagtcagtctgcaggagagtccagttgccg
gccaacttccttaaaaatctcgaagattttcaaatctcacccaatggaaagttaggaata
gtctccaaaggtgatgagaacattaatgtcctggatcttcacagtggaaagctaaggctt
gtccatgcagctggtattatctggcgtcagaaattatcaagagatggccgttaccttgtg
tatgtttgtttccgcaactgtgatgaggatgatgaggccggagtggtgtctaatttgatc
gtaatgcgtcttgctgacggcaagagcatcggcacatgctcactttacaaaactcccacc
ttcctgtccctgtcccaacgtgcactaaacatcatcattggctttgaggacggtagcatt
ggcacatacacggttgtggaccgcgtggacgccgcccttaagataaagatagccacctcc
aacagccgacagattgtcaacaatgcttcacagaaggtgcgccccaaatgtggcaaccat
tcattcaagactgttgccgactgcatctggagggaatcgacggaagtcttctcaagggac
agccccattaacgtgtcggactcaggagaaggggagtcgaccacacctacaaagaagact
gaactgctgcagtga
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