Xiphophorus hellerii (green swordtail): 116732903
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Entry
116732903 CDS
T07363
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116732903
03012 Translation factors [BR:
xhe03012
]
116732903
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116732903
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116732903
mRNA cycle factors
Stress granule specific factors
116732903
Translation factors [BR:
xhe03012
]
Eukaryotic type
Initiation factors
eIF-4
116732903
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116732903
Exosomal proteins of bladder cancer cells
116732903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
CMS1
AAA_22
Flavi_DEAD
AAA_30
AAA
Motif
Other DBs
NCBI-GeneID:
116732903
NCBI-ProteinID:
XP_032439385
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All DBs
Position
14:complement(2237413..2244475)
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AA seq
404 aa
AA seq
DB search
MSADYDNRDNGPEGMEPDGIIESNWNQIVDSFDEMNLREALLRGIYAYGFEKPSAIQQRA
IIPCIKGYDVIAQAQSGTGKTATFAISILQQIDVEMKATQALVLAPTRELAQQIQKVVLA
LGDYMGASCYACIGGTNIRSEVQKLQAEAPHIVVGTPGRVFDMLTRKNLSSKNIKMFVLD
EADEMLSRGFKDQIYEIFQKLSSNIQVVLLSATMPADVLDVTKKFMREPIRILVKKEELT
LEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAL
HGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGR
GGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgactatgataacagggataatggcccagagggcatggagccagatggcatc
atcgagagcaactggaaccagatcgtggacagtttcgatgagatgaacttgcgcgaagct
ctgctcaggggaatttatgcctatggttttgagaagccatccgctattcagcaaagggct
attatcccttgtatcaagggttatgatgtgattgctcaggcccagtctggcactgggaag
actgccacctttgccatttccattctccagcagattgatgtggagatgaaagccacccag
gctctggttctggctcctaccagggagctggcgcagcagattcagaaagtggtgctagcc
ctgggcgactacatgggagccagttgctacgcctgcattggaggcaccaacatccgcagt
gaggtccagaagctgcaggctgaagccccccacattgtggtgggaacccccggccgagtc
tttgacatgctgactcgtaaaaatctctcgtccaaaaacatcaagatgtttgtgcttgat
gaggccgatgagatgctgagtcgaggattcaaggaccaaatctatgagatcttccagaaa
ttgtccagcaacatccaggtcgtcctcctgtcagccacaatgccagctgatgttttggac
gtcacaaagaaattcatgcgggaacccatccggatcctggtgaagaaggaggagctgacc
ctggagggcattcgccagttctacatcaatgtggagaaagaggagtggaagctggacaca
ctgtgcgacttgtatgaaaccctgacgatcacacaagcagtcatcttcatcaacaccagg
aggaaagtagactggctgactgagaagatgcatgccagagacttcaccgtctctgctctg
cacggcgacatggaccagaaggagagagacttgatcatgagggagtttcgctctggttcc
agtagagttctgatcaccactgacctgctggccagagggattgatgttcagcaggtgtcc
ctggttatcaactatgacctgccaaccaacagagaaaactacattcacaggattggtcgt
ggcggtcgctttggcaggaaaggagtagccatcaacatggtgactgaagacgacaaacga
accctgagggatattgaaacattctacaacaccaccgtggaagagatgcccatgaatgtg
gctgacctcatctag
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