Xiphophorus hellerii (green swordtail): 116732933
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Entry
116732933 CDS
T07363
Symbol
cnga1
Name
(RefSeq) LOW QUALITY PROTEIN: cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
116732933 (cnga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116732933 (cnga1)
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116732933 (cnga1)
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF3043
PFF1_TM
Sec62
NPR3
CDC45
Piezo_TM1-24
Tim54
ADI
CAF1A_acidic
Serinc
MDM10
DUF2126
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
116732933
NCBI-ProteinID:
XP_032439435
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All DBs
Position
14:28710864..28722441
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AA seq
663 aa
AA seq
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MAKVAPLIPGPSSGLNPPSIVLQDLEEGAEPGDITEGLRRSQRAGAGALFNVNNSNNNEE
EEEEEKKRKKKEKKEKKEKREKEKQEKKERKEQKQKEKEEKEKEKQKEKEKLEKEKKAKE
EAAKEITVIDPAGNTYYNWLFIITIPVMYNWTLIIARACFEELQTDYLIMWFIVDFICDV
IYIMDMVFRTRTGYLEQGLLVKDEQKLRERYMKTFQFKLDLVSMIPTDILYLILGTTYPE
IRLNKLLRFNRMMEFFQRTETRTNYPNALRISNLVMYILIIIHWNACLYYSFSKAIGFGS
DRFVYPDPTDPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIF
ATIVGNVGSMITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVD
EREVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVFSPGDYICKK
GDIGREMYIIKEGKLAVVADDGITQFVVLSEGSYFGEISILAIKGSKAGNRRTANIRSIG
YSDLFCLSKDDLMEALTEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEMEEKVDR
MTSNLDTLQTQYARLLAEHDATHSKLKHRVTRLEKKLAPPREDAPGDAPPPPTPETTKEE
EKK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggtagcgccactaatccccggcccttcatctgggttaaaccctcccagcatc
gtactgcaggacctggaggagggggcggagccaggtgacatcacagaggggctcagaaga
tcccaaagagccggagctggagctctgttcaacgtcaacaacagcaacaacaacgaggaa
gaggaggaggaggagaagaagaggaaaaagaaagaaaagaaagagaaaaaggagaaaaga
gaaaaggaaaagcaggagaaaaaggaaaggaaggagcagaaacagaaggagaaggaagag
aaagagaaggagaaacagaaagagaaggagaagctggagaaagagaagaaagccaaagag
gaggcggcgaaagagatcacagtgatcgatccagctgggaacacgtactacaactggctc
ttcatcatcaccatcccagtcatgtacaactggaccctgatcatagccagggcttgtttt
gaggagcttcagactgactacctgatcatgtggttcatcgtggactttatctgtgacgtc
atttatatcatggacatggttttcagaaccaggacaggttacctggagcagggtttactg
gtgaaagacgagcagaaactacgtgaacgttacatgaaaactttccagtttaaactggat
ttggtctccatgattcccactgacatcctgtacctgattcttggtaccacctaccctgag
atccgcctcaacaagcttctaagattcaacaggatgatggagttcttccagcgcactgag
accagaaccaattaccccaatgctctacgtatctccaaccttgtcatgtacattctcatc
atcatccactggaatgcctgcctctactattccttctccaaagccatcggttttggttct
gacaggttcgtgtatcccgacccaacagatcctgagtttggccgtctggtgaggaagtac
gcctacagtatgtactggtccacgctaacgctcaccaccattggagaaacgccgccccct
gtggagaactcggagtacttcttcgttgtgacggacttcctggtgggtgtgctgattttt
gccaccattgtcggtaacgttggctcgatgatcactaacatgaacgctgccagagccgac
ttccaggcccggatcgacgccatcaagcagtacatgagtttccggaaggtaactaaagac
ctggaaaagcgagtgattaagtggtttgacttcctgtggaccaataagaaggctgtggat
gagagagaggttctgaagtaccttcctgacaagctaagggctgagatcgccatcaacgta
catctggacaccctgaagaaggtccggatctttgcggactgcgaggctggtctgttggtg
gagctggtgctgaagctgcagccgcaggtcttcagtccaggagattacatctgcaagaag
ggcgacatcggcagggagatgtacatcatcaaggaagggaaactggctgtggttgctgat
gatggcatcacgcagtttgttgttctaagtgaaggaagttactttggggagatcagtatc
ctggctatcaaaggtagtaaggcaggaaacaggaggacagctaacatcaggagcatcggg
tactccgacctcttctgtctttccaaagacgacctgatggaggcgctgacagagtatcct
gatgctaaagctctgctggaggagaagggacggcagattctgatgaaggatggcctgctg
gatctggaggtggcagcccagggcccagaccccaaagagatggaggagaaggtggacagg
atgacgagcaacctggacacgctgcagacccagtacgcccggctgctggcagaacacgat
gcgactcacagcaaactcaaacaccgagtcacccgactggagaagaagctggcgccgcca
cgggaggatgcacctggtgatgctccaccccctcccacacctgagaccaccaaagaagaa
gagaagaaataa
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