Xiphophorus hellerii (green swordtail): 116732957
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Entry
116732957 CDS
T07363
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116732957
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116732957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116732957
NCBI-ProteinID:
XP_032439464
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All DBs
Position
14:2271705..2276600
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AA seq
304 aa
AA seq
DB search
MYSLMEHELKPNGQPQTHQTTGMSPITGNLTGSMGTNGNSLPKTACPPGGDPMDKVKRPM
NAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKEY
PDYKYKPRRKTKPLLKKDAQVGKYPLSAGNLLTAAAQNQGGSPRMEGYGWAPTGGYTGMQ
NEALSYTQQLHRYDLSALQYPPAMTAAQTYMSGANSYSPMSYSSSPQQLSPVNMPMVKAE
PVAHSPSTGTPNHHRGALQGDLRDMISMYIPGPGGDSSDPATAQRGYTSVQQHYLSGTVP
LTHI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcttgatggaacacgagctgaaaccaaacggccagcctcagactcatcagacc
accgggatgtcaccgatcaccggcaacctcaccgggagtatggggaccaatgggaactct
ctcccgaaaacggcttgtccacctggaggcgaccccatggataaagtcaagaggcccatg
aacgcttttatggtgtggtcaagaggacagaggcggaagatggcccaggagaaccccaag
atgcacaactccgagatcagtaagcgactgggagccgagtggaaacttctgaccgatgct
gagaagcggccgttcatcgacgaggccaagagactccgggccgtccacatgaaggagtac
cccgactacaaatacaaaccccgccgcaaaaccaagccgctgctgaagaaggacgcgcag
gtgggcaaatatccgctgtcagcagggaacctactgacggcagcggcccagaaccaaggc
ggcagtccccggatggagggctacggctgggctcccaccgggggctacactggcatgcag
aacgaggcgctcagctacacgcagcagctgcaccggtacgacctgtccgccctccagtac
ccgcccgcgatgacggcggcgcagacgtacatgagcggagccaactcctacagtcccatg
tcatacagcagcagtccgcagcagctgagcccggtgaacatgcccatggtgaaggcagaa
ccggtggcccattcgccctcaacaggaacgccgaaccaccaccgaggggctttgcagggg
gatctcagggacatgatcagcatgtacattcctggacctggaggggattcctccgatcct
gcgactgcacagaggggctacaccagtgtccagcagcactatctcagtggaacggtgcca
cttacgcacatttag
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integrated database retrieval system
