Xiphophorus hellerii (green swordtail): 116732982
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Entry
116732982 CDS
T07363
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe02010
ABC transporters
xhe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116732982
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116732982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116732982
Transporters [BR:
xhe02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116732982
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
ABC2_membrane_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
116732982
NCBI-ProteinID:
XP_032439490
LinkDB
All DBs
Position
14:complement(15020440..15209197)
Genome browser
AA seq
2251 aa
AA seq
DB search
MGLLTQFSLLLWKNFTLRKRQKVRLVVELLWPLFLFFILVGVRSTTKPIHKGQCHYPNKA
MPSAGVLPWLQGIICNIDNPCLDHPTPGETPGQVNNFNNSIIAGMLIELQSVLADRSVLS
KTQLLADDVDQWTSVLSKAEPGKGNLTVILRSILQDNETFSTHLTEGLSVPPDVVQSLMD
AKIQLLSTTGIPRPDNVRSILCKGTDLDDYVQFSSQAQREAFQNVSCSLGEQQLIKTQQV
LLQNVDVRKVLSEIPSAADLNPVDTEALMRKTSADALPLIENAVRLRNSMNFKATESLDF
REDMFGSVNMLLCGKQPNYNFTKMTFGFPSPTQMANNMSTSSMGNSSDAFCQILVDTLEG
TPGLRYIWSTFKPLLQGKILYAPDTPAARLLLKEANSTFNSLAMLKELADSWNELGPRVW
DFLQNSPQVNTLRVLVANPIFAAALNQRLIGTGWTAGLLENFLYNGAPEDRSPGMPPYNW
RDVYNSTTEILKLLSNFLNCLDLNKFEAAATETHLVNKALEHLKNDTFWAGVVFANLHPN
SSHIPPYVKYKIRMDIEEVERTNKLKSRSWSPGARDNSFNDLRYIWGGFAYLQDMIDHAV
IRLQTSKSQPLGVFVQQIPYPCFVDDAFIQSIGTILPMFLVLAFMYSVCMTIKSLVLEKE
LRLKEVLRAVGVQNGALWSSRFTENIVLLTVPCVLISIMLKYGKILQYSDPSVIFVFLLV
FCLATISQCFLISVFFSKANLAAACGGLIFFLLYLPHSLCYAWRDVMGFRAKVAVSLLSC
VAFGYGCENFSKYEEQGIGIQWHNIIRSPEEGDPYTFIVSIAMMLVDAVLYWVLTWYIEN
VFPGQYGIPKPWYFLFTSSYWCGMTPGAENNPDLLTDSGAHIEYFERPPPSVKAGVSIRN
LVKIYKTGKKLAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALIHGYD
IRTDIDSIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGLSRSEVDSEMDQMIKDVGLPH
KRKDLAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTI
ILSTHHMDEADILGDRIAIISQGKMQCCGSSLFLKKCFGSGYYLTLVRDGTEKITNQRKN
ITQNLSKEEQMETARPSRDSPDDGFGSQTLDNSDRTAGLAAVTQLVRRHVPEATFLESIG
QEITFILPYSGARDGTFATLFHKLDLAMADLGLTSYGISDTTLEEIFLKVAEETGVDTEM
PSAKEPLVRDWKRSSRESKRNSVASVRAKSEHNGMREVKEKFLNKVEDYKKSASLNGRGS
MVITGWKLIRTQFLALFIKRFHHARRSRKGLIAQVVLPAFFVCLSLIFSLIVPPFKEYPS
LELQPWMYSLPQTTFYSNDMSENLEVSKVTETLLNNPGFGTRCMHGEPIPGLPCLPTYSD
WTIPSVDQSIKDIFLNGNWSMANPSPSCQCSTPKRTIMLPDCPPGAGGLPPPQRVQNTTE
TLLDLTGRNMTDFLIKTFEDSGKKRYGGISVGAVNSQVRLSEAEVEDVFRDLKNLLSSSQ
DNVTDQTLQRAETVLKKLGTRDNVKVWFYNQAWHGMVSFLSVANNGILRGNLPKGEEPRH
HGISISNHPLNLTKEQLSSAAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKH
LQFVSGVNPAVYWLTNFVWDMCNYIVPCFIVIVIFLCFQQKAYVSPPNLPALILLLIFYG
WAITPMMYPASFIFSVPSTAYVVLTCLNLFIGINGSVATFIMELIEDDNISRINDIVKQV
LLIFPHFCLGRGLIDMAKNQATATLFINFGEDRFKNPLSWEMVGKNLLAMSIQGSVMFIT
TILIQYKFFCKPRLISPKQSATEEEDVDVARERQRVYEGRSQNDLLRISNLTKVYPGKST
PAVDQLCVGVPASECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRHVHQ
NMGYCPQFDAIDELLTGREHLEFYARLRGVPEEEVAMVAEWGIQKLGLIKYANKSAGTYS
GGNKRKLSTAMALIGCPPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEE
CEALCTRMAIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQLTFPDS
VLKEKHHNTLQYQLPYTQGALASIFSHFTSNQHRLGVEDYSVSQTTLDQVFVNFARHQHG
EDDSQAYSNPVDVTDELPMRSLRASREAENA
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttctctctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggttgtggagctgctctggcctctgtttctcttcttcatactggtg
ggggtgaggtctaccactaagccaattcacaaaggtcaatgccactacccaaacaaagcc
atgccatctgctggtgtactgccctggcttcaaggaataatatgtaacatcgacaatcca
tgtttggaccacccaacgccaggagagacaccaggccaagtgaataacttcaacaactcc
ataattgcagggatgttgattgagctgcagtctgtgctggcagacaggtctgttctcagt
aagacgcagttgctggcagatgatgttgaccagtggacttcagtactgtctaaagcggaa
cctggaaaagggaatctgactgtgatcctaagaagtattctacaagacaatgaaaccttc
agcacccatctgacagagggtttgtcagttccaccagatgtagttcaaagcctcatggat
gcgaagattcagcttctttcaacgacgggcatcccaaggcctgacaatgtgaggagcatc
ttgtgtaaggggacagatctggatgactatgtccaatttagcagccaagctcagagggag
gcttttcaaaatgtcagctgctccctcggtgaacagcagctgattaaaacccagcaagtc
cttctacaaaacgtggacgtgaggaaagtgctttcagagattccttcagctgcggacctg
aatccagtggacacagaggcactaatgagaaaaaccagtgcagatgcactgccattgatc
gagaatgcggtcaggctgcggaactccatgaactttaaggcaacagagtccctggatttc
cgggaggacatgtttggaagcgtcaacatgctgctctgtgggaagcagcctaactacaac
ttcaccaagatgaccttcggttttccttcacctacacagatggctaacaatatgtcaact
tccagcatgggcaacagttccgatgccttttgtcagattcttgtcgacaccctggagggc
acacctggtctgcgctacatttggagcaccttcaagccattattgcaagggaagatcctc
tacgcacctgatacacctgctgctcgcctcctgctgaaggaagcaaacagcactttcaac
tctctcgccatgttaaaggagctggcagattcttggaatgaacttggcccacgtgtctgg
gattttctgcagaatagccctcaagtcaacacgttgcgggttctggtggcaaatcccata
ttcgcagctgccctcaaccagcgtctcattgggacaggatggacagccgggctgctggag
aacttcctgtacaatggcgctccagaagaccgttcacccggcatgccaccctacaactgg
cgggatgtttacaactccaccactgaaatcctgaagctcctctccaatttcctgaattgt
cttgatctgaataagtttgaagcagctgcgacagaaacccatctggtgaacaaagccttg
gagcatctgaaaaatgacacattctgggctggagttgtctttgcgaacctccatccaaac
tcaagtcacatccctccttatgtgaagtacaaaattcggatggacattgaggaggtggag
cgcaccaacaagttgaaatcaaggtcatggtctcctggagccagggacaactcctttaac
gacctgcgctacatctggggaggctttgcttacctgcaggacatgatcgaccacgctgtt
atacgactgcaaacatcaaagtctcagccgcttggtgttttcgtccagcaaatcccatac
ccttgctttgttgatgatgcctttatccagagtattggaacaattctacccatgttcctg
gtgctggccttcatgtactctgtgtgcatgaccatcaaaagcctggtgctggagaaggag
ctgcggcttaaggaggtgctgcgggccgttggtgttcaaaatggcgcactctggtcctcc
aggttcacagagaacattgttctgctcacagttccatgtgtgctcataagtatcatgctc
aagtacggcaaaatcctgcagtacagcgacccctcagtaatctttgtcttcttgctggtc
ttctgtttggccaccatctcccagtgcttcctcattagcgtcttcttctctaaggccaat
ttagcggcggcgtgtggcggcctcatcttctttctcctctacctgccacacagcctctgt
tacgcctggagggacgtcatgggtttcagggccaaggtggctgtgagtttactgtcatgt
gttgcctttggttatgggtgcgagaacttttccaaatatgaggagcaaggcattggtata
cagtggcacaacattatcaggagtcccgaggagggggatccatacaccttcattgtctcc
atcgccatgatgctcgttgacgccgtcttatactgggtgctaacctggtacattgaaaat
gtcttcccaggtcaatatgggattcctaagccatggtacttcctgttcacttcctcttac
tggtgtgggatgacaccaggagctgaaaacaaccctgatctgctgacagactctggggcg
cacatcgaatattttgaaagaccacctcccagtgtgaaagcgggggtgtcaattcgcaat
cttgtcaaaatctacaagaccgggaagaaactggcggtggacggcctgagcgtggacttc
tacgagaatcagatcacatcatttttgggccacaatggagctggaaaaacaaccacaatg
tcaattctgaccgggctgttcccacctacatcaggaacagccctcatccatggatacgac
atccgcaccgacatagacagcattaggaagtatttgggaatgtgtccgcagcataatgtc
ctatttaatgagctcactgtggaggagcacatttacttctacgccaggttgaagggactt
agtcgcagtgaggttgactctgagatggaccagatgattaaagatgttggtttaccacac
aagcgtaaggatcttgctaagaacctatcaggtggcatgcagcgaaaactctctgtggca
atagcctttgttggcggttcaaagattgtcatcctagatgaaccaacagcaggagtagac
ccttacgctcgccgggggatttgggaactactgctaaagtacaaacaaggtcgcaccatt
attttgtcaacacaccacatggatgaggcagacatcttaggagaccgcatagccatcatc
tctcaaggaaagatgcaatgctgcggctcctcgctcttcctgaagaagtgtttcggcagt
ggctactacctgactctggtcagagatgggacggaaaaaattaccaatcagcgtaaaaat
atcacacaaaatctgtccaaggaggaacaaatggagacagcccgtccttccagggatagt
ccagatgacggcttcggcagtcaaacattggacaattctgaccgtacagcaggtcttgct
gctgtaactcagcttgtgcgccgccatgtaccagaagctacgtttttggagagcatcggt
caggagatcaccttcatccttccctacagtggagccagagacgggaccttcgccacactc
ttccacaagcttgatctcgctatggctgaccttggcctgaccagctatggcatctctgac
accacactggaggagatatttctgaaagtggcagaagaaaccggcgtggatacagaaatg
ccatcagcaaaggagccattggttagagactggaaaagaagctcccgcgaatctaaaagg
aatagcgttgccagcgtccgcgccaaatcagagcacaacgggatgagagaagttaaagaa
aaatttttgaataaagttgaagattataagaaaagtgccagcctgaatggaaggggatcc
atggtcatcaccggttggaaactgatcagaacgcagtttctggctctcttcatcaagcgc
ttccaccacgcccgaaggagccgcaagggactcattgcgcaggtggtcttgcctgctttc
ttcgtgtgcctttctctgatcttctccctcatcgttccaccattcaaagaatatccaagt
ctggagctgcagccatggatgtacagtcttccccaaaccacattttatagcaatgacatg
tctgaaaatttggaggtgtcaaaggtgacagaaactttattgaacaaccctggttttggg
acacgttgtatgcatggagagccaataccaggcttaccgtgtttgccaacttactctgat
tggaccattccatctgtggatcagtcaatcaaagacatcttcctcaacgggaactggagc
atggctaatccttcgccttcctgccaatgcagcactcctaaacggacgattatgttaccc
gactgtccaccaggagcgggaggtctccctccaccacagagagtacagaacacaacagaa
actctgctggatttaactggacggaacatgacagacttcttgatcaagacttttgaggac
tccggaaaaaaaaggtatggaggtatttctgtgggagcagtcaactcacaagtccgtcta
tctgaggcagaggtcgaagatgtcttcagggatttgaaaaatcttttgagttcatctcag
gataacgtcactgatcagaccctgcagagagccgagacggtgctgaagaagcttggaacc
agggacaatgtcaaggtgtggttctacaatcaggcatggcatggcatggtgtccttcctt
agtgtggccaacaatggcatcctgagaggaaatcttcccaagggagaggaaccacgccac
catggcatctccatttctaatcaccccctaaatctcaccaaggagcagctctcctccgca
gccatggcgacgacctctacagacgtggtggtgtccatctgtgttattttcgccatgtcc
ttcatccctgccagcttcgtcctctttctaatccaggagagggtgagcaaagccaagcat
ctgcaatttgtcagcggtgtaaacccggccgtctactggttaaccaatttcgtctgggat
atgtgtaactacatcgtgccctgcttcatcgtgattgtgatcttcctctgttttcaacaa
aaagcctacgtttcacctccgaatctgcccgctttgatactgctcctaattttttatgga
tgggccatcacacccatgatgtacccagcctccttcatcttcagcgttcccagcacggct
tacgtggtgttgacctgcctcaacctcttcattggcatcaatggcagtgtggccaccttc
atcatggagctcattgaagatgataacatatctcgcattaatgacatagtgaagcaggtg
cttctgatattcccacatttctgtctgggcagaggtcttattgacatggccaagaaccag
gcaacggcaactcttttcatcaattttggggaagatcgttttaagaatccactgagctgg
gagatggtgggaaaaaatctccttgccatgtctattcaaggaagtgtgatgttcatcact
accattctcatccagtacaagttcttctgcaaaccgaggcttatatcaccaaagcagtcg
gctacagaggaggaggacgttgacgttgcccgggaacgccagagagtgtatgaaggcaga
tctcagaacgacctgttgaggatcagtaacctcacaaaggtataccctgggaagagcacc
cctgctgtggaccagctatgcgtgggcgtgcctgcttctgagtgtttcggcttgctgggg
atcaacggcgctgggaaaaccacgacattcaagatgctgacgggagacatcccagtctcc
agcggagaggcctttctaaacggatacagcatacggacagaaatgagacatgttcaccag
aacatgggttactgtccccagtttgacgccattgatgaacttttgactggacgagagcat
ctggagttttatgctcgactaagaggggtaccagaagaagaggttgccatggtggccgaa
tgggggattcagaagttggggctgatcaagtacgccaacaagtcagcaggaacctacagc
ggtgggaacaaacgtaaactttccacagcgatggccttgatcgggtgtccgccagtggtt
ttcttggatgagccaaccaccgggatggaccccaaagccagacgcttcctttgggactgc
atcctgagtgtcatcaaagagggacgctcagtgattctcacatcgcacagcatggaggag
tgtgaagcactgtgcactcgcatggccatcatggtaaatggtcgcttcaaatgccttgga
agcatccagcatctgaaaagcagatttggtgatggctacacggtgatcgtgcgtgtcggc
ggctcccctcctgccctcaaaccagtcgaggactttgtccagctgactttcccagacagc
gttctcaaggagaaacaccacaacacactccagtaccaactcccatacacacagggagct
ttggccagcatcttcagccacttcaccagcaatcagcacaggctgggcgtggaggactac
tctgtgtcccagacaactctggatcaggtctttgtgaactttgcacgccaccagcatggg
gaggatgactctcaggcctacagcaacccagtcgacgtcacagacgagctgccaatgagg
tcgctgcgggcctcccgggaagcggagaacgcctaa
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integrated database retrieval system
