Xiphophorus hellerii (green swordtail): 116732987
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Entry
116732987 CDS
T07363
Name
(RefSeq) netrin-1-like isoform X1
KO
K06843
netrin 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116732987
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Axon guidance molecules
116732987
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
116732987
NCBI-ProteinID:
XP_032439497
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Position
14:13224284..13243529
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AA seq
844 aa
AA seq
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MSSSLGSAESTLDDMMVRPSSLPPSISLIPVLLRLLLLPPSLISSSFSNAPLSWTSPHEP
CYHPDGRPRHCLSEFINAAYGVQVNVTHSLHGPDNNPNITTLTDLHNPNNLTCWRARTGG
DSGDWVFTLPLGRRFEITYISLQFCSQGQPSDPISISILKSMDHGRTWRPMQHYSSNCLE
DFKQPSLTIAQTRHQETEPLCSDPRPLQRQRGSTVLAFSTLDGRPSSPDFDYSPTLQDWV
TATDIRVVFHRTSNNVKATDKMEEIQWRDGLPDSKRTGILKWKLDTKSDTGDQVDKLRDN
ALAFFDKDKRKNSEISRRNKEERIDKQRQKDHRKGSGHGQDGHNVTSKEGEDTFGTTDLL
ASPKKGGKARKRNRNKENNFWVPCSNGDCPWTVEGRSRKNGGRELRKRRNNNPNTKQNLR
TSQPSGLILPVRAPLAISDLQVGGRCKCNGHASRCRRDDSGQAVCVCEHHTAGPDCDMCE
DFYVDRPWHRATPTHPNPCVACECNGHSNKCRFSMEVFQQSGRKSGGVCLKCRHHTAGRH
CQYCQSGYTRDTSKPLDHRKACQPCQCHPLGAVGRWCNQTSGQCLCREGVTGLRCNRCAP
GYKQGKSPLRPCIRIQEVAPTPVYQPQYSIAEECVSYCQPSEVKVRMNLETYCLKDYVLK
VQVRGMERSGPWWQFSIAVQTVFRTGSNSRVRRGSQSLWVPDRDLSCGCPALHVGRTFLL
IGAEEGERSWAPEESRLVADRSTLALQWREHWSPKLRGFRGQDKRGRCPQKSPSAHRPRS
REHAKTHSAYIPPHLLTEKDASPHFDKTVNLDEAQSSTERHIAPTETGPSPSTIALVCST
QNPE
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcactgggatctgcagaaagcacgctcgatgacatgatggtccgaccctct
tcccttcccccctccatctctctcattcctgttctcctccgactcctcctcctccctccg
tctctcatctcctcttccttctccaacgccccactgagctggacctcgcctcacgagccc
tgctaccacccagatggccgtcctcgacactgcctgtcggagttcatcaatgccgcttac
ggggtccaagtcaacgtcacccactccctacacgggcccgataacaaccccaacatcacc
accctaacggacctgcacaacccaaacaacctgacctgctggagggctcgcacaggaggc
gactccggcgactgggtcttcaccttaccgctgggccgccgctttgagatcacctacatc
agcttgcagttctgcagccaagggcagccatctgaccccatatccatctccatccttaaa
tccatggaccacgggcgtacctggcggccgatgcagcactactccagcaactgtctggag
gacttcaaacaaccctcattgaccatcgcccaaacgagacaccaagagacagagccgctc
tgttcggacccccggcccctgcagaggcagcggggcagcacagtcctcgccttctccact
ctggatggtcgcccgtcttctcctgattttgattacagccccaccctccaggactgggtc
acggccacggacatccgggttgtcttccacagaacttccaacaacgtaaaggctacagat
aaaatggaagaaatccagtggcgtgacggcctccctgactccaaacgaactgggattctg
aagtggaaattggatacaaagagcgacactggagatcaggtggacaaattaagagacaat
gcactggccttttttgacaaggacaaaagaaaaaactcagagattagtaggaggaataag
gaggaacggatagacaagcagcgtcagaaggaccatcgcaaaggttctggtcatggccaa
gatggccacaatgtgaccagcaaggaaggagaagacacttttggcaccaccgacttactc
gcttcgccaaagaaaggtggcaaagccagaaagcgaaatcgcaacaaggaaaacaacttt
tgggtcccttgctcaaacggagactgcccttggacggtcgaagggcggagcaggaagaat
ggtggccgggaactgaggaagaggaggaacaacaaccccaacacaaaacaaaacttacgg
acttcccagccctctggcttgatcctccctgtccgagcccctctggccatttccgacctg
caagtcggagggagatgcaaatgcaacggacacgcttccaggtgtcgccgtgacgactca
ggtcaggcagtgtgtgtgtgcgagcatcacacggcgggcccagactgtgacatgtgtgag
gacttctatgttgatagaccgtggcatcgcgctacacccactcacccaaacccctgcgtt
gcctgtgagtgtaatggccactcaaacaaatgccgcttcagcatggaggtgttccagcag
tcgggcaggaagagcggaggcgtgtgcctgaaatgtcgccaccacacggccgggcgccac
tgccagtactgccagagcggctacacccgcgacaccagcaagccgctcgaccaccgcaag
gcctgccaaccatgccagtgccatcctctgggagctgtgggccgctggtgcaaccaaacg
tcgggtcagtgtctgtgtcgagaaggagtgaccggcctcaggtgtaaccgctgcgctccg
ggatacaagcagggcaagtccccgctgcgaccctgcatacgcattcaggaggtcgctcca
acccctgtgtaccaacctcagtacagcatcgcggaggagtgtgtgtcctactgccagccc
tctgaggtcaaagtcaggatgaacctggagacgtattgtctcaaggactatgtgctgaag
gtgcaggtgagagggatggagcgttcaggaccgtggtggcagttctccatcgctgtacaa
accgtcttccggacaggctctaactcccgtgtccggaggggctcccagtccctctgggtt
cccgaccgcgacctcagctgcggctgccccgccctccacgtgggccggacattcctcctc
atcggcgcagaggaaggggagcggagttgggctccggaagagagtcgcctggtggcggat
cgctccacactggccctccagtggcgggaacactggagccccaagctcaggggcttccgg
gggcaggacaagaggggccgctgcccccagaaatccccaagcgcccaccgcccccgtagc
agggagcacgcaaagacacattctgcatacatcccccctcacctgctgaccgagaaggat
gccagccctcattttgacaaaactgtgaacttggatgaggctcagagcagcacagagcga
cacatcgcccccacagagacaggaccctctccttccaccatcgctctggtgtgttcgact
caaaatcctgagtaa
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