Xiphophorus hellerii (green swordtail): 116733034
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Entry
116733034 CDS
T07363
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116733034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116733034
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116733034
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116733034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-UDP
zf-RING_Vps41
PHD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116733034
NCBI-ProteinID:
XP_032439576
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All DBs
Position
14:complement(14145669..14160836)
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AA seq
773 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVCHHIEAVIRSDPRCGSVVLGQVDSRLSPYIIDLH
SMHQFRQDTGTLRPVRRSFYDPTTAPGQGWLWEWENDAGSWTAYDTEVGIAIQAARDRQQ
PWLDLAPLGFCYLIDFESMTQINGQTQRCRRIQRRADLAYPLVSGPLPRSHHAWGPASMP
GYGGLLGVDVSGVGMGMRMSSSGIGNGSAYPSGALPASAITSLGQPCACQQCMLVLSLKA
GTMSTAHTLGRRPPQTKPPSPKLNSYPIPGSSYSLTLPRPPSLSSRSLSPHRTSGFGATG
GYNVTGMGIPGGMGVIGAGGVGSNTFGFGSSFTHSLSLLGPATAALSISSTRPPPPPLPP
PPPPPPPPSTAPMSASIPPPQTSASSTLSVSFSAPTQQNPAPALISTAASTCTPSPSARV
LGPVSSSGAAACAAPLPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPV
HPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLSQSCRKTTKKQARKG
KTPEEVVKRYLHKVRNPPEEDCTICMEALAGPSGYKGPGVGGISRAESVGRLAQCGHQYH
LQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIY
NIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTT
GESDTVIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELRAQGITEEECLTRD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttactagcatccgccgtggtggtatgggaatggctgaacgagcacggacgctggcgg
ccgtacagcccggctgtatgtcaccacatcgaggcagtcatccggagcgacccgcggtgt
ggtagcgtggtcctcggccaagtggactctcgcctctcgccctacatcatcgatttacat
tccatgcaccaattccgacaagacacaggtacccttcgacctgttcgacgtagcttctac
gatcccaccacagcaccaggccaaggctggttgtgggagtgggagaacgacgctggcagt
tggacagcatacgacacagaggtgggcatcgccatccaggcagctcgtgatcgccagcag
ccctggctggacctggcgccgctggggttttgctacctgattgactttgaaagcatgacc
caaatcaatgggcagacgcagcgctgccgacggatccagagacgcgccgatctggcatac
ccactggtgtctggacccttacccagatcccatcacgcatggggacctgcatctatgccc
ggctatggaggactgctcggcgttgacgtttccggtgtaggcatggggatgaggatgagc
agcagtgggattggaaatgggagcgcttacccaagcggggcacttcccgcttcggccatc
acttctttgggacaaccctgcgcctgtcaacagtgtatgttggtgctaagtctcaaagca
ggaacaatgtcgactgcccacactctgggccgaagaccaccacagactaagccacccagt
cccaaattaaacagctaccccatcccaggaagctcttattctctgactctcccccgcccc
ccatcgctgtcatcaagatctctttctcctcacaggacttctggttttggggcgactggt
ggttacaatgtaactggtatgggaattccaggagggatgggggttattggtgctggtggc
gttggcagtaacaccttcgggtttggaagtagcttcacacactcgctttccctgctcgga
ccagctactgctgccctctccatctcctcaactcgtcccccacctcctcctctcccccca
cctcctccgccacctcctccaccctctacagctcccatgtctgcctccatccctccgcct
caaacctcagcttcctccaccctctccgtctccttttcggcccccacgcagcaaaaccca
gccccagctctcatctccactgccgcctccacctgcacaccgtcgccttctgcccgtgtt
ctcggtccagtgtcttcatctggtgctgctgcctgtgcggcccccttgccgccgcggtct
agcctcgccggtctgagtcgtcctgccctgcagcgtatcgccatggctcagtcgcgagca
cttattgcctccggagtgccaacagttccagtaaagaacctcaatggatccagccctgtg
catcctgccttggcaggtattacaggcatcctgatgagtgctgcgggacttcctgtctgc
ctcacacgccctcctaagctggtacttcatcccccacctgtcagcaagagtgacatcaaa
cctgtgcctggcttgagccagagctgccgcaaaaccacgaagaagcaagctcggaaaggc
aaaacaccagaggaagtggtgaagcgttaccttcacaaagtccgaaatcctccagaggag
gactgcaccatctgcatggaggccctggcaggaccttcgggctacaagggccccggcgtg
ggtggcatctcccgtgccgagtcagtgggccgtctggcacagtgtggtcaccagtatcac
ctccagtgtcttgttgccatgtacaacaacggcaacaaggacggtagcctgcagtgcccc
acttgcaagactatctacggggtcaagacgggcaatcagcccccaggcaaaatggagtac
catgtcatcccccactcactgccgggacatccagactgcaaaaccatccgcataatctac
aacatccctcctggcattcagggccctgagcacccaaatccaggaaaaccgttcacagca
cgtggtttccccagacactgttatctccccgacagtgagaagggtcgcaaggttctgaga
cttctcctggtagcgtgggaccgcaggctcatcttctccgtaggcacgtccagcacaacc
ggcgagtccgacacagtgatctggaacgaggtgcaccacaagaccgaattcggctccaac
ctcacgggccatgggtaccccgacccgggtcacctggacaacgtcctggaggagctgagg
gctcagggcatcaccgaggaggagtgcctaactagagactga
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